Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g005620.2 Solanum lycopersicum HOM05D005968 ORTHO05D007158 6.6e-69 263.8 127 100.0
Sopen07g001730 Solanum pennellii HOM05D005968 ORTHO05D007158 1.9e-68 262.3 127 99.2
PGSC0003DMG400011184 Solanum tuberosum HOM05D005968 ORTHO05D007158 1.1e-66 256.5 123 99.2
Cc06_g14960 Coffea canephora HOM05D005968 ORTHO05D007158 7.1e-63 243.8 126 90.5
Peaxi162Scf00401g00718 Petunia axillaris HOM05D005968 ORTHO05D007158 4.3e-60 234.6 116 95.7
Hma1.2p1_0222F.1_g093590 Hydrangea macrophylla HOM05D005968 ORTHO05D007158 5.6e-60 234.2 126 87.3
Dinv43246 Davidia involucrata HOM05D005968 ORTHO05D007158 9.5e-60 233.4 126 88.1
MD02G1007400 Malus domestica HOM05D005968 ORTHO05D007158 9.5e-60 233.4 125 85.6
Manes.14G143600 Manihot esculenta HOM05D005968 ORTHO05D007158 9.5e-60 233.4 124 87.9
HanXRQChr09g0245781 Helianthus annuus HOM05D005968 ORTHO05D007158 1.6e-59 232.6 126 86.5
Oeu038141.1 Olea europaea HOM05D005968 ORTHO05D007158 1.6e-59 232.6 126 84.9
Dinv41378 Davidia involucrata HOM05D005968 ORTHO05D007158 2.8e-59 231.9 123 88.6
Prupe.7G263000 Prunus persica HOM05D005968 ORTHO05D007158 2.8e-59 231.9 122 88.5
MD15G1144700 Malus domestica HOM05D005968 ORTHO05D007158 3.6e-59 231.5 125 85.6
Potri.006G184300 Populus trichocarpa HOM05D005968 ORTHO05D007158 6.2e-59 230.7 124 85.5
CSS0021374 Camellia sinensis var. sinensis HOM05D005968 ORTHO05D007158 1.1e-58 229.9 122 88.5
Potri.018G106700 Populus trichocarpa HOM05D005968 ORTHO05D007158 3.1e-58 228.4 124 84.7
Dinv42854 Davidia involucrata HOM05D005968 ORTHO05D007158 4.0e-58 228.0 122 88.5
DCAR_019393 Daucus carota HOM05D005968 ORTHO05D007158 5.2e-58 227.6 122 86.1
PGR102G1528 Punica granatum HOM05D005968 ORTHO05D007158 6.8e-58 227.3 123 86.2
ECA236G4418 Erigeron canadensis HOM05D005968 ORTHO05D007158 1.2e-57 226.5 123 85.4
Ciclev10008980m.g Citrus clementina HOM05D005968 ORTHO05D007158 1.5e-57 226.1 123 84.6
Lalb_Chr12g0198701 Lupinus albus HOM05D005968 ORTHO05D007158 2.6e-57 225.3 127 82.7
Atru.chr7.47_Atru.chr7.48 Acer truncatum HOM05D005968 ORTHO05D007158 3.4e-57 224.9 123 84.6
GSVIVG01023605001 Vitis vinifera HOM05D005968 ORTHO05D007158 3.4e-57 224.9 126 83.3
CiPaw.15G168400 Carya illinoinensis HOM05D005968 ORTHO05D007158 4.4e-57 224.6 124 83.9
Duzib187G1838 Durio zibethinus HOM05D005968 ORTHO05D007158 4.4e-57 224.6 123 83.7
Glyma.02G204100 Glycine max HOM05D005968 ORTHO05D007158 5.8e-57 224.2 124 83.1
RcHm_v2.0_Chr2g0085621 Rosa chinensis HOM05D005968 ORTHO05D007158 5.8e-57 224.2 125 82.4
Thecc.09G030600 Theobroma cacao HOM05D005968 ORTHO05D007158 5.8e-57 224.2 124 83.1
Migut.K00326 Erythranthe guttata HOM05D005968 ORTHO05D007158 7.6e-57 223.8 124 83.1
Psat0s2403g0360 Pisum sativum HOM05D005968 ORTHO05D007158 7.6e-57 223.8 126 80.2
SalBow1G6433 Salvia bowleyana HOM05D005968 ORTHO05D007158 1.3e-56 223.0 116 88.8
TPR.G24874 Trifolium pratense HOM05D005968 ORTHO05D007158 1.3e-56 223.0 127 80.3
Glyma.17G073700 Glycine max HOM05D005968 ORTHO05D007158 2.2e-56 222.2 124 82.3
Gohir.D08G273400 Gossypium hirsutum HOM05D005968 ORTHO05D007158 2.2e-56 222.2 124 83.9
Gorai.004G291800 Gossypium raimondii HOM05D005968 ORTHO05D007158 2.9e-56 221.9 123 84.6
FAN23G3092 Fragaria x ananassa HOM05D005968 ORTHO05D007158 4.9e-56 221.1 124 83.1
Lj4g0027447 Lotus japonicus HOM05D005968 ORTHO05D007158 6.4e-56 220.7 123 82.9
FAN26G1763 Fragaria x ananassa HOM05D005968 ORTHO05D007158 8.4e-56 220.3 125 82.4
Gohir.A08G251800 Gossypium hirsutum HOM05D005968 ORTHO05D007158 1.4e-55 219.5 124 83.1
Nn2g12378 Nelumbo nucifera HOM05D005968 ORTHO05D007158 1.4e-55 219.5 122 84.4
FvH4_1g00920 Fragaria vesca HOM05D005968 ORTHO05D007158 1.9e-55 219.2 122 84.4
Medtr4g130840 Medicago truncatula HOM05D005968 ORTHO05D007158 1.9e-55 219.2 125 79.2
CANSAT11G2689 Cannabis sativa HOM05D005968 ORTHO05D007158 2.4e-55 218.8 123 82.1
Nn8g39893 Nelumbo nucifera HOM05D005968 ORTHO05D007158 4.1e-55 218.0 123 83.7
Lj7A459G65 Lonicera japonica HOM05D005968 ORTHO05D007158 5.4e-55 217.6 126 81.7
CARHR238800 Cardamine hirsuta HOM05D005968 ORTHO05D007158 7.1e-55 217.2 122 81.1
Eucgr.C02493 Eucalyptus grandis HOM05D005968 ORTHO05D007158 7.1e-55 217.2 123 80.5
CiPaw.16G111000 Carya illinoinensis HOM05D005968 ORTHO05D007158 1.2e-54 216.5 118 83.9
PSO561G0082 Papaver somniferum HOM05D005968 ORTHO05D007158 1.2e-54 216.5 123 80.5
Sp7g28770 Schrenkiella parvula HOM05D005968 ORTHO05D007158 1.2e-54 216.5 123 82.1
PSO111G0029 Papaver somniferum HOM05D005968 ORTHO05D007158 2.1e-54 215.7 123 80.5
Lsat_1_v5_gn_8_63401 Lactuca sativa HOM05D005968 ORTHO05D007158 2.7e-54 215.3 117 86.3
TAR626G1902 Trochodendron aralioides HOM05D005968 ORTHO05D007158 2.7e-54 215.3 119 82.4
QL02p093270 Quercus lobata HOM05D005968 ORTHO05D007158 3.5e-54 214.9 124 80.6
Thhalv10025727m.g Eutrema salsugineum HOM05D005968 ORTHO05D007158 7.8e-54 213.8 123 79.7
Sed0018428 Sechium edule HOM05D005968 ORTHO05D007158 1.0e-53 213.4 123 81.3
DCAR_017911 Daucus carota HOM05D005968 ORTHO05D007158 3.0e-53 211.8 126 77.0
Carub.0007s0964 Capsella rubella HOM05D005968 ORTHO05D007158 5.1e-53 211.1 123 78.0
THA.LOC104803560 Tarenaya hassleriana HOM05D005968 ORTHO05D007158 5.1e-53 211.1 123 79.7
AL7G21190 Arabidopsis lyrata HOM05D005968 ORTHO05D007158 8.7e-53 210.3 123 78.0
HPP92_004698 Vanilla planifolia HOM05D005968 ORTHO05D007158 1.1e-52 209.9 128 79.7
ClCG06G012410 Citrullus lanatus HOM05D005968 ORTHO05D007158 1.5e-52 209.5 125 79.2
MELO3C010224.2 Cucumis melo HOM05D005968 ORTHO05D007158 1.5e-52 209.5 125 79.2
arahy.Tifrunner.gnm1.ann1.D6JQQQ Arachis hypogaea HOM05D005968 ORTHO05D007158 2.5e-52 208.8 117 82.9
C01p08040 Brassica napus HOM05D005968 ORTHO05D007158 3.6e-51 204.9 117 82.9
BcaC09g51877 Brassica carinata HOM05D005968 ORTHO05D007158 4.7e-51 204.5 117 82.9
A01p07280 Brassica napus HOM05D005968 ORTHO05D007158 4.7e-51 204.5 117 82.9
BraA01t00677Z Brassica rapa HOM05D005968 ORTHO05D007158 4.7e-51 204.5 117 82.9
Os05g0279600 Oryza sativa ssp. japonica HOM05D005968 ORTHO05D007158 4.7e-51 204.5 126 73.0
AT4G30900 Arabidopsis thaliana HOM05D005968 ORTHO05D007158 8.1e-51 203.8 123 76.4
BolC1t00793H Brassica oleracea HOM05D005968 ORTHO05D007158 1.1e-50 203.4 117 82.1
Cfa020826 Carpinus fangiana HOM05D002374 ORTHO05D003594 1.1e-50 203.4 107 86.0
VMungo1215G2113 Vigna mungo HOM05D005968 ORTHO05D007158 1.4e-50 203.0 116 79.3
Sabra06G0140100 Salix brachista HOM05D005968 ORTHO05D007158 3.1e-50 201.8 200 54.5
Zm00001eb086780 Zea mays HOM05D005968 ORTHO05D007158 5.2e-50 201.1 124 72.6
Zm00001eb420110 Zea mays HOM05D005968 ORTHO05D007158 5.2e-50 201.1 123 73.2
BcaNung03430 Brassica carinata HOM05D005968 ORTHO05D007158 1.2e-49 199.9 124 75.8
EL10Ac8g18668 Beta vulgaris HOM05D005968 ORTHO05D007158 2.0e-49 199.1 123 76.4
Sabra18G0090900 Salix brachista HOM05D005968 ORTHO05D007158 2.0e-49 199.1 170 59.4
Aa31LG2G19470 Aethionema arabicum HOM05D005968 ORTHO05D007158 4.4e-49 198.0 117 77.8
Aqoxy2G01962_Aqoxy2G01963 Aquilegia oxysepala HOM05D005968 ORTHO05D007158 5.8e-49 197.6 127 74.0
Ca_21128_v3 Cicer arietinum L. HOM05D005968 ORTHO05D007158 9.9e-49 196.8 117 77.8
Cpa.g.sc46.156 Carica papaya HOM05D005968 ORTHO05D007158 4.9e-48 194.5 146 67.1
CiPaw.15G168700 Carya illinoinensis HOM05D005968 ORTHO05D007158 4.6e-46 188.0 117 76.1
Mapoly0088s0077 Marchantia polymorpha HOM05D005968 ORTHO05D007158 9.0e-42 173.7 121 63.6
SEGI_19747 Sequoiadendron giganteum HOM05D005968 ORTHO05D007158 5.8e-41 171.0 126 62.7
TWI34G0179 Tripterygium wilfordii HOM05D005968 ORTHO05D007158 6.0e-38 161.0 90 81.1
COL.COLO4_18810 Corchorus olitorius HOM05D000238 ORTHO05D007158 3.3e-36 155.2 87 81.6
ATR0739G020 Amborella trichopoda HOM05D005968 ORTHO05D007158 5.6e-36 154.5 89 76.4
AagrBONN_evm.TU.Sc2ySwM_362.192 Anthoceros agrestis HOM05D005968 ORTHO05D007158 8.1e-35 150.6 111 60.4
CsaV3_1G028970 Cucumis sativus L. HOM05D005968 ORTHO05D007158 1.2e-33 146.7 90 74.4
unitig_52.g17565 Utricularia gibba HOM05D005968 ORTHO05D007158 1.5e-33 146.4 113 63.7
Phvul.003G156000 Phaseolus vulgaris HOM05D005968 ORTHO05D007158 5.8e-33 144.4 92 71.7
Lsat_1_v5_gn_4_18741 Lactuca sativa HOM05D005968 ORTHO05D007158 1.3e-32 143.3 82 79.3
CDE04G1812 Ceratophyllum demersum HOM05D005968 ORTHO05D007158 1.1e-31 140.2 89 67.4
Actinidia38673 Actinidia chinensis HOM05D005968 ORTHO05D007158 4.2e-31 138.3 83 78.3
TAR636G0142 Trochodendron aralioides HOM05D002374 ORTHO05D003594 3.7e-27 125.2 71 78.9
AUR62029822 Chenopodium quinoa HOM05D005968 ORTHO05D007158 2.9e-24 115.5 67 76.1
Eucgr.C02541 Eucalyptus grandis HOM05D005968 ORTHO05D007158 3.9e-21 105.1 71 71.8
Lsat_1_v5_gn_7_66900 Lactuca sativa HOM05D005968 ORTHO05D007158 7.4e-20 100.9 81 61.7
AUR62006466 Chenopodium quinoa HOM05D005968 ORTHO05D007158 9.7e-20 100.5 54 79.6
Nitab4.5_0003623g0020 Nicotiana tabacum HOM05D005968 ORTHO05D007158 2.4e-18 95.9 51 88.2
SGA_v2.0_scaffold347G49545 Striga asiatica HOM05D005968 ORTHO05D007158 1.3e-16 90.1 48 85.4
arahy.Tifrunner.gnm1.ann1.QXT71M Arachis hypogaea HOM05D005968 ORTHO05D007158 3.6e-14 82.0 46 80.4
arahy.Tifrunner.gnm1.ann1.VCSM30 Arachis hypogaea HOM05D005968 ORTHO05D007158 1.0e-13 80.5 47 76.6
arahy.Tifrunner.gnm1.ann1.4WLG0J Arachis hypogaea HOM05D005968 ORTHO05D007158 8.8e-13 77.4 62 61.3
Haze_19213 Corylus avellana HOM05D000344 ORTHO05D005296 3.7e-11 72.0 34 91.2
arahy.Tifrunner.gnm1.ann1.HGKJ8P Arachis hypogaea HOM05D005968 ORTHO05D007158 3.1e-10 68.9 40 77.5
Oeu038782.2 Olea europaea HOM05D005968 ORTHO05D007158 6.9e-10 67.8 56 62.5


User provided reference genes

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