Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g005240.4 Solanum lycopersicum HOM05D007151 ORTHO05D009056 3.2e-267 924.5 453 100.0
PGSC0003DMG400011834 Solanum tuberosum HOM05D007151 ORTHO05D009056 2.0e-248 862.1 453 93.2
CAN.G520.35 Capsicum annuum HOM05D007151 ORTHO05D009056 6.1e-234 813.9 453 88.3
Nitab4.5_0010178g0030 Nicotiana tabacum HOM05D007151 ORTHO05D009056 6.3e-223 777.3 453 85.0
Nitab4.5_0000416g0100 Nicotiana tabacum HOM05D007151 ORTHO05D009056 6.1e-218 760.8 455 83.1
Peaxi162Scf00347g00330 Petunia axillaris HOM05D007151 ORTHO05D009056 1.5e-216 756.1 450 82.7
Sopen07g001150 Solanum pennellii HOM05D007151 ORTHO05D009056 4.3e-211 738.0 360 99.4
CSS0031191 Camellia sinensis var. sinensis HOM05D007151 ORTHO05D009056 5.8e-168 594.7 404 69.8
vmacro21874 Vaccinium macrocarpon HOM05D007151 ORTHO05D009056 7.6e-168 594.3 424 67.0
Actinidia04263 Actinidia chinensis HOM05D007151 ORTHO05D009056 1.1e-166 590.5 456 63.8
Actinidia04269 Actinidia chinensis HOM05D007151 ORTHO05D009056 3.0e-164 582.4 455 63.5
GSVIVG01001047001 Vitis vinifera HOM05D007151 ORTHO05D009056 4.8e-162 575.1 408 66.9
Oeu052172.1 Olea europaea HOM05D007151 ORTHO05D009056 7.6e-160 567.8 427 64.2
ECA234G3390 Erigeron canadensis HOM05D000399 ORTHO05D000304 3.8e-159 565.5 415 64.8
TWI34G1895 Tripterygium wilfordii HOM05D007151 ORTHO05D009056 6.4e-159 564.7 415 65.5
Atru.chr7.189 Acer truncatum HOM05D007151 ORTHO05D009056 1.4e-158 563.5 407 64.9
Manes.06G039800 Manihot esculenta HOM05D007151 ORTHO05D009056 1.4e-158 563.5 421 65.1
DCAR_019364 Daucus carota HOM05D007151 ORTHO05D009056 1.9e-158 563.1 407 66.8
TAR626G0740 Trochodendron aralioides HOM05D007151 ORTHO05D009056 1.9e-158 563.1 426 62.9
Cpa.g.sc46.106 Carica papaya HOM05D007151 ORTHO05D009056 1.6e-157 560.1 401 67.3
Cc06_g23440 Coffea canephora HOM05D007151 ORTHO05D009056 1.0e-156 557.4 424 63.9
Lj9A711T48 Lonicera japonica HOM05D007151 ORTHO05D009056 1.3e-156 557.0 466 60.5
Nn8g39757 Nelumbo nucifera HOM05D007151 ORTHO05D009056 2.3e-156 556.2 411 64.5
Thecc.09G036700 Theobroma cacao HOM05D007151 ORTHO05D009056 2.3e-156 556.2 421 64.1
Duzib168G1221 Durio zibethinus HOM05D007151 ORTHO05D009056 2.1e-154 549.7 417 64.3
Sabra18G0095800 Salix brachista HOM05D007151 ORTHO05D009056 6.2e-154 548.1 406 66.5
Potri.018G112600 Populus trichocarpa HOM05D007151 ORTHO05D009056 8.2e-154 547.7 406 67.0
QL02p091761 Quercus lobata HOM05D007151 ORTHO05D009056 2.4e-153 546.2 405 64.0
CANSAT11G1483 Cannabis sativa HOM05D007151 ORTHO05D009056 4.0e-153 545.4 422 61.1
RcHm_v2.0_Chr2g0086401 Rosa chinensis HOM05D007151 ORTHO05D009056 6.9e-153 544.7 405 65.2
Aqoxy7G03505 Aquilegia oxysepala HOM05D007151 ORTHO05D009056 1.5e-152 543.5 441 58.5
HanXRQChr10g0314511 Helianthus annuus HOM05D007151 ORTHO05D009056 2.0e-152 543.1 445 59.6
Cfa020867 Carpinus fangiana HOM05D007151 ORTHO05D009056 3.4e-152 542.3 411 64.0
Dinv41414 Davidia involucrata HOM05D007151 ORTHO05D009056 4.5e-152 542.0 366 72.1
COL.COLO4_18747 Corchorus olitorius HOM05D007151 ORTHO05D009056 1.0e-151 540.8 419 64.0
Sed0008117 Sechium edule HOM05D007151 ORTHO05D009056 1.3e-151 540.4 412 62.9
MD02G1011800 Malus domestica HOM05D007151 ORTHO05D009056 1.7e-151 540.0 411 65.0
Prupe.7G252600 Prunus persica HOM05D007151 ORTHO05D009056 2.2e-151 539.7 405 64.7
Gohir.A13G185600 Gossypium hirsutum HOM05D007151 ORTHO05D009056 2.9e-151 539.3 423 61.5
FvH4_1g01491 Fragaria vesca HOM05D007151 ORTHO05D009056 4.9e-151 538.5 419 64.0
FAN26G2518 Fragaria x ananassa HOM05D007151 ORTHO05D009056 1.1e-150 537.3 399 65.4
Gohir.D13G192100 Gossypium hirsutum HOM05D007151 ORTHO05D009056 1.1e-150 537.3 422 61.4
Migut.K00359 Erythranthe guttata HOM05D007151 ORTHO05D009056 3.2e-150 535.8 455 57.6
Lsat_1_v5_gn_0_44621 Lactuca sativa HOM05D007151 ORTHO05D009056 3.2e-150 535.8 419 61.6
Lsat_1_v5_gn_5_90740 Lactuca sativa HOM05D007151 ORTHO05D009056 3.2e-150 535.8 419 61.6
CiPaw.15G171100 Carya illinoinensis HOM05D007151 ORTHO05D009056 4.2e-150 535.4 411 62.5
Gorai.013G218000 Gossypium raimondii HOM05D007151 ORTHO05D009056 1.6e-149 533.5 422 61.1
Ciclev10008285m.g Citrus clementina HOM05D007151 ORTHO05D009056 3.0e-148 529.3 407 62.2
THA.LOC104826576 Tarenaya hassleriana HOM05D007151 ORTHO05D009056 8.7e-148 527.7 409 61.9
ClCG06G012110 Citrullus lanatus HOM05D007151 ORTHO05D009056 2.5e-147 526.2 408 63.7
Thhalv10025257m.g Eutrema salsugineum HOM05D007151 ORTHO05D009056 2.5e-147 526.2 432 60.2
Glyma.15G208200 Glycine max HOM05D007151 ORTHO05D009056 2.5e-147 526.2 414 61.4
PGR142G3459 Punica granatum HOM05D007151 ORTHO05D009056 2.5e-147 526.2 418 60.5
Haze_19293 Corylus avellana HOM05D007151 ORTHO05D009056 9.7e-147 524.2 411 63.3
AT2G22650 Arabidopsis thaliana HOM05D007151 ORTHO05D009056 4.8e-146 521.9 406 60.3
CsaV3_1G028600 Cucumis sativus L. HOM05D007151 ORTHO05D009056 8.2e-146 521.2 406 62.1
A03p51030 Brassica napus HOM05D007151 ORTHO05D009056 1.1e-145 520.8 409 60.9
BraA03t14189Z Brassica rapa HOM05D007151 ORTHO05D009056 1.1e-145 520.8 416 60.8
Eucgr.C00404 Eucalyptus grandis HOM05D007151 ORTHO05D009056 1.8e-145 520.0 407 61.7
AL3G44210 Arabidopsis lyrata HOM05D007151 ORTHO05D009056 2.4e-145 519.6 418 60.0
C07p49460 Brassica napus HOM05D007151 ORTHO05D009056 3.1e-145 519.2 418 61.0
Lj6g0019652 Lotus japonicus HOM05D007151 ORTHO05D009056 1.2e-144 517.3 417 59.2
Hund21618 Selenicereus undatus HOM05D007151 ORTHO05D009056 2.0e-144 516.5 426 58.7
PSO063G2965 Papaver somniferum HOM05D007151 ORTHO05D009056 4.5e-144 515.4 443 57.6
BolC7t45451H Brassica oleracea HOM05D007151 ORTHO05D009056 2.9e-143 512.7 410 60.7
FAN23G0937 Fragaria x ananassa HOM05D007151 ORTHO05D009056 1.1e-142 510.8 444 59.7
CARHR104080 Cardamine hirsuta HOM05D007151 ORTHO05D009056 9.4e-142 507.7 414 58.2
VMungo1309G1509 Vigna mungo HOM05D007151 ORTHO05D009056 9.4e-142 507.7 410 60.2
SGA_v2.0_scaffold336G49159 Striga asiatica HOM05D007151 ORTHO05D009056 1.2e-141 507.3 418 58.4
TPR.G31930 Trifolium pratense HOM05D007151 ORTHO05D009056 1.8e-140 503.4 430 57.9
Medtr2g449830 Medicago truncatula HOM05D007151 ORTHO05D009056 8.8e-140 501.1 407 59.2
arahy.Tifrunner.gnm1.ann1.BVF972 Arachis hypogaea HOM05D007151 ORTHO05D009056 1.9e-139 500.0 411 59.1
Sp7g16040 Schrenkiella parvula HOM05D007151 ORTHO05D009056 7.4e-139 498.0 417 59.2
Psat1g022920 Pisum sativum HOM05D007151 ORTHO05D009056 4.8e-138 495.4 403 59.8
Aa31sc130G90 Aethionema arabicum HOM05D007151 ORTHO05D009056 6.3e-138 495.0 401 58.6
EL10Ac8g18840 Beta vulgaris HOM05D007151 ORTHO05D009056 5.0e-135 485.3 441 55.1
Phvul.009G208100 Phaseolus vulgaris HOM05D007151 ORTHO05D009056 1.2e-133 480.7 411 58.4
MELO3C010253.2 Cucumis melo HOM05D007151 ORTHO05D009056 2.3e-132 476.5 406 58.4
Sc08g0005090 Simmondsia chinensis HOM05D007151 ORTHO05D009056 1.1e-131 474.2 399 59.1
AUR62042027 Chenopodium quinoa HOM05D007151 ORTHO05D009056 2.6e-131 473.0 403 57.3
arahy.Tifrunner.gnm1.ann1.36BD1U Arachis hypogaea HOM05D007151 ORTHO05D009056 1.1e-129 467.6 387 58.1
SGA_v2.0_scaffold206G41840 Striga asiatica HOM05D007151 ORTHO05D009056 1.2e-128 464.2 422 55.7
Os06g0181400 Oryza sativa ssp. japonica HOM05D007151 ORTHO05D009056 1.0e-127 461.1 401 55.1
Zm00001eb268060 Zea mays HOM05D007151 ORTHO05D009056 2.2e-127 459.9 401 54.6
CSS0035136 Camellia sinensis var. sinensis HOM05D007151 ORTHO05D009056 1.8e-124 450.3 299 70.2
Ah.14g078500 Amaranthus hybridus HOM05D007151 ORTHO05D009056 9.7e-123 444.5 404 55.4
CDE05G1962 Ceratophyllum demersum HOM05D007151 ORTHO05D009056 3.7e-122 442.6 411 54.7
Ca_25731_v3 Cicer arietinum L. HOM05D007151 ORTHO05D009056 1.4e-121 440.7 369 58.5
unitig_899.g15451 Utricularia gibba HOM05D007151 ORTHO05D009056 9.1e-121 438.0 397 52.9
SEGI_09059 Sequoiadendron giganteum HOM05D007151 ORTHO05D009056 1.6e-120 437.2 426 51.6
Rhsim01G0049000 Rhododendron simsii HOM05D007151 ORTHO05D008498 2.6e-120 436.4 353 60.6
FvH4_5g35120 Fragaria vesca HOM05D007151 ORTHO05D009056 1.5e-107 394.0 284 65.5
Lalb_Chr08g0233881 Lupinus albus HOM05D007151 ORTHO05D009056 7.5e-107 391.7 305 61.0
ATR0629G078 Amborella trichopoda HOM05D007151 ORTHO05D009056 1.3e-106 391.0 369 50.9
Carub.0013s0015 Capsella rubella HOM05D007151 ORTHO05D009056 5.0e-103 379.0 299 61.5
Mapoly0072s0110 Marchantia polymorpha HOM05D007151 ORTHO05D009056 5.7e-99 365.5 418 45.9
Pp3c21_4180 Physcomitrium patens HOM05D007151 ORTHO05D009056 1.3e-90 337.8 401 46.1
AagrBONN_evm.TU.Sc2ySwM_117.1501 Anthoceros agrestis HOM05D007151 ORTHO05D009056 6.0e-64 249.2 307 41.7
Cc06_g23410 Coffea canephora HOM05D007151 ORTHO05D009056 9.0e-60 235.3 277 47.7
PRCOL_00000450 Prasinoderma coloniale HOM05D007151 ORTHO05D009056 2.1e-45 187.6 403 33.5
CANSAT11G0850 Cannabis sativa HOM05D007151 ORTHO05D009056 4.8e-45 186.4 122 69.7
Cre02.g109800 Chlamydomonas reinhardtii HOM05D007151 ORTHO05D009056 1.9e-41 174.5 513 29.4
SMO364G0487 Selaginella moellendorffii HOM05D007151 ORTHO05D009056 8.7e-39 165.6 199 43.2
Lalb_Chr08g0233871 Lupinus albus HOM05D007151 ORTHO05D009056 6.5e-34 149.4 115 64.3
MCO12G285 Micromonas commoda HOM05D007151 ORTHO05D009056 6.9e-28 129.4 499 26.7
CBR_g19142 Chara braunii HOM05D007151 ORTHO05D009056 6.9e-20 102.8 265 28.7
HPP92_018514 Vanilla planifolia HOM05D007151 ORTHO05D009056 8.5e-18 95.9 92 56.5
TPR.G31928 Trifolium pratense HOM05D007151 ORTHO05D009056 1.2e-16 92.0 97 50.5
FAN11G2323 Fragaria x ananassa HOM05D007151 ORTHO05D009056 9.7e-14 82.4 55 67.3
Hma1.2p1_0182F.1_g080700 Hydrangea macrophylla HOM05D007151 ORTHO05D009056 1.2e-08 65.5 49 61.2


User provided reference genes

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