Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g084625.1 Solanum lycopersicum HOM05D007601 ORTHO05D009605 3.6e-48 194.5 93 100.0
Sopen06g036000 Solanum pennellii HOM05D007601 ORTHO05D009605 5.2e-39 164.1 80 100.0
SalBow6G1877 Salvia bowleyana HOM05D007601 ORTHO05D009605 8.1e-32 140.2 97 70.1
MSTRG.18076 Avicennia marina HOM05D007601 ORTHO05D009605 2.2e-29 132.1 80 77.5
Migut.D00044 Erythranthe guttata HOM05D007601 ORTHO05D009605 4.1e-28 127.9 83 78.3
CSS0043622 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 5.4e-28 127.5 80 77.5
Potri.002G191200 Populus trichocarpa HOM05D007601 ORTHO05D009605 7.1e-28 127.1 80 75.0
Dinv33148 Davidia involucrata HOM05D007601 ORTHO05D009605 1.2e-27 126.3 80 75.0
CSS0036648 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 1.6e-27 125.9 80 76.2
Ca_09231_v3 Cicer arietinum L. HOM05D007601 ORTHO05D009605 2.1e-27 125.6 80 76.2
Oeu044742.1 Olea europaea HOM05D007601 ORTHO05D009605 2.7e-27 125.2 80 72.5
TPR.G4122 Trifolium pratense HOM05D007601 ORTHO05D009605 2.7e-27 125.2 80 75.0
BcaB01g02392 Brassica carinata HOM05D007601 ORTHO05D009605 4.6e-27 124.4 80 70.0
Eucgr.H00897 Eucalyptus grandis HOM05D007601 ORTHO05D009605 4.6e-27 124.4 80 73.8
Medtr7g109980 Medicago truncatula HOM05D007601 ORTHO05D009605 4.6e-27 124.4 80 75.0
THA.LOC104815915 Tarenaya hassleriana HOM05D007601 ORTHO05D009605 4.6e-27 124.4 80 72.5
Carub.0006s3532 Capsella rubella HOM05D007601 ORTHO05D009605 6.0e-27 124.0 80 70.0
FvH4_1g26600 Fragaria vesca HOM05D007601 ORTHO05D009605 6.0e-27 124.0 81 74.1
Manes.01G231900 Manihot esculenta HOM05D007601 ORTHO05D009605 6.0e-27 124.0 80 71.2
Sabra02G0164400 Salix brachista HOM05D007601 ORTHO05D009605 6.0e-27 124.0 80 72.5
TAR633G2747 Trochodendron aralioides HOM05D007601 ORTHO05D009605 6.0e-27 124.0 80 73.8
Aa31LG5G1450 Aethionema arabicum HOM05D007601 ORTHO05D009605 7.8e-27 123.6 80 70.0
COL.COLO4_23178 Corchorus olitorius HOM05D007601 ORTHO05D009605 1.0e-26 123.2 80 75.0
Duzib138G1106 Durio zibethinus HOM05D007601 ORTHO05D009605 1.0e-26 123.2 80 73.8
Sp6g01760 Schrenkiella parvula HOM05D007601 ORTHO05D009605 1.0e-26 123.2 80 68.8
AL6G51380 Arabidopsis lyrata HOM05D007601 ORTHO05D009605 1.3e-26 122.9 80 68.8
C03p38320 Brassica napus HOM05D007601 ORTHO05D009605 1.3e-26 122.9 79 69.6
CAN.G1209.15 Capsicum annuum HOM05D007601 ORTHO05D009605 1.3e-26 122.9 80 76.2
CiPaw.07G121600 Carya illinoinensis HOM05D007601 ORTHO05D009605 1.3e-26 122.9 80 72.5
Hma1.2p1_0965F.1_g242190 Hydrangea macrophylla HOM05D007601 ORTHO05D009605 1.3e-26 122.9 80 72.5
Prupe.3G005400 Prunus persica HOM05D007601 ORTHO05D009605 1.7e-26 122.5 78 73.1
CsaV3_3G031680 Cucumis sativus L. HOM05D007601 ORTHO05D009605 2.3e-26 122.1 80 67.5
Thhalv10029076m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 2.3e-26 122.1 80 68.8
Glyma.19G219400 Glycine max HOM05D007601 ORTHO05D009605 2.3e-26 122.1 78 73.1
FAN19G1881 Fragaria x ananassa HOM05D007601 ORTHO05D009605 3.0e-26 121.7 79 74.7
A03p31410 Brassica napus HOM05D007601 ORTHO05D009605 3.9e-26 121.3 79 68.4
BraA03t12322Z Brassica rapa HOM05D007601 ORTHO05D009605 3.9e-26 121.3 79 68.4
Thecc.01G320300 Theobroma cacao HOM05D007601 ORTHO05D009605 3.9e-26 121.3 80 73.8
BcaC01g06793 Brassica carinata HOM05D007601 ORTHO05D009605 5.1e-26 120.9 80 68.8
BcaC01g06795 Brassica carinata HOM05D007601 ORTHO05D009605 5.1e-26 120.9 80 68.8
BolC3t16113H Brassica oleracea HOM05D007601 ORTHO05D009605 5.1e-26 120.9 80 68.8
Glyma.03G222200 Glycine max HOM05D007601 ORTHO05D009605 5.1e-26 120.9 80 71.2
QL12p018497 Quercus lobata HOM05D007601 ORTHO05D009605 5.1e-26 120.9 78 71.8
FAN26G1400 Fragaria x ananassa HOM05D007601 ORTHO05D009605 6.6e-26 120.6 80 73.8
Gohir.A11G107400 Gossypium hirsutum HOM05D007601 ORTHO05D009605 6.6e-26 120.6 80 72.5
GSVIVG01028182001 Vitis vinifera HOM05D007601 ORTHO05D009605 6.6e-26 120.6 80 67.5
Atru.chr5.923 Acer truncatum HOM05D007601 ORTHO05D009605 8.6e-26 120.2 80 70.0
Psat3g018760 Pisum sativum HOM05D007601 ORTHO05D009605 1.1e-25 119.8 80 72.5
arahy.Tifrunner.gnm1.ann1.FU6CGW Arachis hypogaea HOM05D007601 ORTHO05D009605 1.5e-25 119.4 80 70.0
Ciclev10022849m.g Citrus clementina HOM05D007601 ORTHO05D009605 1.5e-25 119.4 80 70.0
CARHR249870 Cardamine hirsuta HOM05D007601 ORTHO05D009605 1.9e-25 119.0 80 66.2
DCAR_002918 Daucus carota HOM05D007601 ORTHO05D009605 2.5e-25 118.6 80 72.5
FAN23G1483 Fragaria x ananassa HOM05D007601 ORTHO05D009605 2.5e-25 118.6 82 70.7
MD17G1280000 Malus domestica HOM05D007601 ORTHO05D009605 2.5e-25 118.6 78 73.1
arahy.Tifrunner.gnm1.ann1.UJ54IQ Arachis hypogaea HOM05D007601 ORTHO05D009605 4.3e-25 117.9 80 68.8
Gohir.D11G112200 Gossypium hirsutum HOM05D007601 ORTHO05D009605 5.6e-25 117.5 80 71.2
Sed0008912 Sechium edule HOM05D007601 ORTHO05D009605 5.6e-25 117.5 80 67.5
MD09G1287800 Malus domestica HOM05D007601 ORTHO05D009605 7.3e-25 117.1 78 71.8
Cpa.g.c29544.1 Carica papaya HOM05D007601 ORTHO05D009605 9.5e-25 116.7 80 67.5
Lj1g0003568 Lotus japonicus HOM05D007601 ORTHO05D009605 9.5e-25 116.7 78 69.2
Sc14g0006440 Simmondsia chinensis HOM05D007601 ORTHO05D009605 9.5e-25 116.7 80 68.8
Lalb_Chr04g0260071 Lupinus albus HOM05D007601 ORTHO05D009605 2.1e-24 115.5 80 68.8
AT4G01897 Arabidopsis thaliana HOM05D007601 ORTHO05D009605 2.8e-24 115.2 80 65.0
HanXRQChr01g0010181 Helianthus annuus HOM05D007601 ORTHO05D009605 2.8e-24 115.2 80 65.0
ECA248G1243 Erigeron canadensis HOM05D007601 ORTHO05D009605 6.2e-24 114.0 80 65.0
Phvul.001G215600 Phaseolus vulgaris HOM05D007601 ORTHO05D009605 6.2e-24 114.0 80 68.8
VMungo1383G2396 Vigna mungo HOM05D007601 ORTHO05D009605 6.2e-24 114.0 80 70.0
ClCG10G011680 Citrullus lanatus HOM05D007601 ORTHO05D009605 1.4e-23 112.8 101 56.4
PSO210G6513 Papaver somniferum HOM05D007601 ORTHO05D009605 1.8e-23 112.5 79 65.8
AUR62011748 Chenopodium quinoa HOM05D007601 ORTHO05D009605 3.1e-23 111.7 80 62.5
Cc01_g21960 Coffea canephora HOM05D007601 ORTHO05D009605 4.0e-23 111.3 83 68.7
TWI59G0276 Tripterygium wilfordii HOM05D007601 ORTHO05D009605 4.0e-23 111.3 69 78.3
EL10As5g23595 Beta vulgaris HOM05D007601 ORTHO05D009605 1.2e-22 109.8 81 61.7
CANSAT25G0069 Cannabis sativa HOM05D007601 ORTHO05D009605 2.0e-22 109.0 80 65.0
RcHm_v2.0_Chr3g0486741 Rosa chinensis HOM05D007601 ORTHO05D009605 2.0e-22 109.0 69 78.3
Aqoxy2G02617 Aquilegia oxysepala HOM05D007601 ORTHO05D009605 4.4e-22 107.8 80 66.2
Rhsim01G0292900 Rhododendron simsii HOM05D007601 ORTHO05D009605 4.4e-22 107.8 69 76.8
PSO761G0263 Papaver somniferum HOM05D007601 ORTHO05D009605 1.7e-21 105.9 79 64.6
Os03g0564200 Oryza sativa ssp. japonica HOM05D007601 ORTHO05D009605 3.7e-21 104.8 79 64.6
vmacro15096 Vaccinium macrocarpon HOM05D007601 ORTHO05D009605 2.4e-20 102.1 59 81.4
MELO3C012921.2 Cucumis melo HOM05D007601 ORTHO05D009605 7.1e-20 100.5 58 79.3
Gorai.007G120500 Gossypium raimondii HOM05D007601 ORTHO05D009605 1.6e-19 99.4 60 78.3
Hund09590 Selenicereus undatus HOM05D007601 ORTHO05D009605 3.5e-19 98.2 80 56.2
Zm00001eb043090 Zea mays HOM05D007601 ORTHO05D009605 1.7e-18 95.9 78 56.4
FAN28G1650 Fragaria x ananassa HOM05D007601 ORTHO05D009605 1.1e-17 93.2 55 81.8
Nn4g25447 Nelumbo nucifera HOM05D007601 ORTHO05D009605 6.8e-15 84.0 64 60.9
AUR62024591 Chenopodium quinoa HOM05D007601 ORTHO05D009605 2.0e-14 82.4 55 63.6
Pp3c1_30400 Physcomitrium patens HOM05D007601 ORTHO05D009605 2.4e-12 75.5 72 48.6
AagrBONN_evm.TU.Sc2ySwM_228.1634 Anthoceros agrestis HOM05D007601 ORTHO05D009605 3.2e-12 75.1 70 51.4
Thhalv10009552m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 2.5e-09 65.5 79 45.6
Mapoly0105s0007 Marchantia polymorpha HOM05D007601 ORTHO05D009605 4.8e-08 61.2 66 48.5


User provided reference genes

Program Settings