Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g084570.4 Solanum lycopersicum HOM05D006737 ORTHO05D008418 4.5e-183 644.4 317 100.0
Sopen06g035940 Solanum pennellii HOM05D006737 ORTHO05D008418 2.9e-174 615.1 317 96.8
CAN.G1209.24 Capsicum annuum HOM05D006737 ORTHO05D008418 6.1e-140 501.1 304 82.9
Nitab4.5_0004367g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 2.8e-132 475.7 352 71.0
Peaxi162Scf00140g01213 Petunia axillaris HOM05D006737 ORTHO05D008418 1.5e-125 453.4 263 85.2
GSVIVG01028025001 Vitis vinifera HOM05D006737 ORTHO05D008418 3.1e-99 365.9 293 62.5
Prupe.8G262100 Prunus persica HOM05D006737 ORTHO05D008418 1.2e-98 364.0 305 59.0
vmacro02447 Vaccinium macrocarpon HOM05D006737 ORTHO05D008418 2.6e-98 362.8 290 63.1
Cfa005906 Carpinus fangiana HOM05D006737 ORTHO05D008418 1.7e-97 360.1 291 59.8
CSS0030900 Camellia sinensis var. sinensis HOM05D006737 ORTHO05D008418 1.4e-96 357.1 294 61.2
MD03G1288800 Malus domestica HOM05D006737 ORTHO05D008418 9.3e-96 354.4 289 59.2
TAR365G0544 Trochodendron aralioides HOM05D006737 ORTHO05D008418 9.3e-96 354.4 296 60.8
FvH4_2g25800 Fragaria vesca HOM05D006737 ORTHO05D008418 1.6e-95 353.6 289 59.9
MD11G1309100 Malus domestica HOM05D006737 ORTHO05D008418 1.6e-95 353.6 289 59.9
MSTRG.12607 Avicennia marina HOM05D006737 ORTHO05D008418 2.7e-95 352.8 287 57.8
Haze_04944 Corylus avellana HOM05D006737 ORTHO05D008418 3.5e-95 352.4 289 58.8
FAN15G3576 Fragaria x ananassa HOM05D006737 ORTHO05D008418 4.6e-95 352.1 289 59.9
FAN24G1027 Fragaria x ananassa HOM05D006737 ORTHO05D008418 4.6e-95 352.1 289 59.5
TWI14G0449 Tripterygium wilfordii HOM05D006737 ORTHO05D008418 7.8e-95 351.3 297 59.3
ECA236G1530 Erigeron canadensis HOM05D006737 ORTHO05D008418 1.7e-94 350.1 309 56.6
Atru.chr5.1140 Acer truncatum HOM05D006737 ORTHO05D008418 2.3e-94 349.7 312 56.1
Ciclev10021225m.g Citrus clementina HOM05D006737 ORTHO05D008418 3.0e-94 349.4 289 57.8
Manes.01G219800 Manihot esculenta HOM05D006737 ORTHO05D008418 3.9e-94 349.0 289 57.8
RcHm_v2.0_Chr6g0294111 Rosa chinensis HOM05D006737 ORTHO05D008418 6.6e-94 348.2 306 56.5
Gorai.008G144900 Gossypium raimondii HOM05D006737 ORTHO05D008418 8.7e-94 347.8 297 57.9
Cpa.g.sc9.256 Carica papaya HOM05D006737 ORTHO05D008418 1.9e-93 346.7 289 59.2
Eucgr.H01107 Eucalyptus grandis HOM05D006737 ORTHO05D008418 1.9e-93 346.7 296 58.8
Gohir.A12G130100 Gossypium hirsutum HOM05D006737 ORTHO05D008418 3.3e-93 345.9 297 57.9
Gohir.D12G133900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 3.3e-93 345.9 306 55.6
Lsat_1_v5_gn_8_164261 Lactuca sativa HOM05D006737 ORTHO05D008418 1.3e-92 344.0 290 57.6
Lj6g0001904 Lotus japonicus HOM05D006737 ORTHO05D008418 2.1e-92 343.2 292 56.8
EL10Ac7g17513 Beta vulgaris HOM05D006737 ORTHO05D008418 3.6e-92 342.4 293 56.7
FAN27G1696 Fragaria x ananassa HOM05D006737 ORTHO05D008418 3.6e-92 342.4 302 57.0
Nn3g21504 Nelumbo nucifera HOM05D006737 ORTHO05D008418 6.2e-92 341.7 291 59.5
Migut.N01508 Erythranthe guttata HOM05D006737 ORTHO05D008418 1.4e-91 340.5 291 58.4
Potri.002G203900 Populus trichocarpa HOM05D006737 ORTHO05D008418 2.4e-91 339.7 290 58.3
AUR62008669 Chenopodium quinoa HOM05D006737 ORTHO05D008418 4.0e-91 339.0 295 55.9
Migut.O00484 Erythranthe guttata HOM05D006737 ORTHO05D008418 5.3e-91 338.6 291 57.7
AUR62025575 Chenopodium quinoa HOM05D006737 ORTHO05D008418 2.0e-90 336.7 295 55.9
Thecc.01G301300 Theobroma cacao HOM05D006737 ORTHO05D008418 2.6e-90 336.3 337 51.0
QL12p028401 Quercus lobata HOM05D006737 ORTHO05D008418 4.5e-90 335.5 288 55.9
Hund05430 Selenicereus undatus HOM05D006737 ORTHO05D008418 1.3e-89 334.0 293 55.6
DCAR_002840 Daucus carota HOM05D006737 ORTHO05D008418 3.8e-89 332.4 309 56.6
Sabra02G0155300 Salix brachista HOM05D006737 ORTHO05D008418 1.4e-88 330.5 348 48.9
Migut.J01135 Erythranthe guttata HOM05D006737 ORTHO05D008418 5.4e-88 328.6 292 57.9
Glyma.19G211400 Glycine max HOM05D006737 ORTHO05D008418 5.4e-88 328.6 289 56.4
Gohir.A08G076400 Gossypium hirsutum HOM05D006737 ORTHO05D008418 5.4e-88 328.6 304 53.6
SalBow2G2271 Salvia bowleyana HOM05D006737 ORTHO05D008418 7.1e-88 328.2 262 59.2
PSO170G1161 Papaver somniferum HOM05D006737 ORTHO05D008418 1.2e-87 327.4 293 54.6
PSO407G0435 Papaver somniferum HOM05D006737 ORTHO05D008418 1.2e-87 327.4 293 54.6
Phvul.001G207600 Phaseolus vulgaris HOM05D006737 ORTHO05D008418 2.1e-87 326.6 289 55.7
Oeu048335.1 Olea europaea HOM05D006737 ORTHO05D008418 2.7e-87 326.2 242 63.2
Gohir.D08G085900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 3.5e-87 325.9 304 53.3
FAN20G1602 Fragaria x ananassa HOM05D006737 ORTHO05D008418 6.0e-87 325.1 284 57.0
MBI19_g26092_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 1.3e-86 323.9 286 57.7
Gorai.004G090400 Gossypium raimondii HOM05D006737 ORTHO05D008418 1.8e-86 323.6 304 53.0
BcaB01g02446 Brassica carinata HOM05D006737 ORTHO05D008418 2.3e-86 323.2 299 53.8
CiPaw.07G109800 Carya illinoinensis HOM05D006737 ORTHO05D008418 5.1e-86 322.0 326 50.6
Rhsim13G0009900 Rhododendron simsii HOM05D006737 ORTHO05D008418 6.7e-86 321.6 295 55.9
Aqoxy2G02933 Aquilegia oxysepala HOM05D006737 ORTHO05D008418 1.5e-85 320.5 291 55.0
Cc01_g20900 Coffea canephora HOM05D006737 ORTHO05D008418 1.5e-85 320.5 291 56.4
Thhalv10028823m.g Eutrema salsugineum HOM05D006737 ORTHO05D008418 1.3e-84 317.4 299 52.8
CiPaw.07G109600 Carya illinoinensis HOM05D006737 ORTHO05D008418 2.1e-84 316.6 262 58.8
HanXRQChr04g0114161 Helianthus annuus HOM05D006737 ORTHO05D008418 2.8e-84 316.2 290 55.2
PGR119G0152 Punica granatum HOM05D006737 ORTHO05D008418 2.8e-84 316.2 296 53.0
AL6G50710 Arabidopsis lyrata HOM05D006737 ORTHO05D008418 3.6e-84 315.8 289 54.0
CANSAT25G2451 Cannabis sativa HOM05D006737 ORTHO05D008418 3.6e-84 315.8 294 55.4
BcaC01g06761 Brassica carinata HOM05D006737 ORTHO05D008418 4.8e-84 315.5 303 52.8
Carub.0006s3475 Capsella rubella HOM05D006737 ORTHO05D008418 6.2e-84 315.1 289 55.4
Hma1.2p1_0491F.1_g164620 Hydrangea macrophylla HOM05D006737 ORTHO05D008418 6.2e-84 315.1 270 57.0
Actinidia01489 Actinidia chinensis HOM05D006737 ORTHO05D008418 9.0e-83 311.2 243 62.1
SGA_v2.0_scaffold198G41142 Striga asiatica HOM05D006737 ORTHO05D008418 9.0e-83 311.2 293 54.6
Aa31LG5G2050 Aethionema arabicum HOM05D006737 ORTHO05D008418 2.0e-82 310.1 305 52.8
Sp6g02290 Schrenkiella parvula HOM05D006737 ORTHO05D008418 2.0e-82 310.1 301 52.8
A03p31080 Brassica napus HOM05D006737 ORTHO05D008418 2.2e-81 306.6 309 52.1
BraA03t12285Z Brassica rapa HOM05D006737 ORTHO05D008418 2.2e-81 306.6 309 52.1
CARHR250600 Cardamine hirsuta HOM05D006737 ORTHO05D008418 6.4e-81 305.1 306 51.0
ClCG01G014930 Citrullus lanatus HOM05D006737 ORTHO05D008418 8.4e-81 304.7 286 53.1
C03p37890 Brassica napus HOM05D006737 ORTHO05D008418 1.1e-80 304.3 311 51.8
arahy.Tifrunner.gnm1.ann1.AY1VU4 Arachis hypogaea HOM05D006737 ORTHO05D008418 7.1e-80 301.6 295 50.8
VMungo1383G2597 Vigna mungo HOM05D006737 ORTHO05D008418 7.1e-80 301.6 262 56.9
BolC3t16077H Brassica oleracea HOM05D006737 ORTHO05D008418 1.2e-79 300.8 310 50.0
CsaV3_6G041030 Cucumis sativus L. HOM05D006737 ORTHO05D008418 3.9e-78 295.8 288 52.4
MELO3C024580.2 Cucumis melo HOM05D006737 ORTHO05D008418 6.7e-78 295.0 288 52.4
Sc05g0003760 Simmondsia chinensis HOM05D006737 ORTHO05D008418 1.9e-77 293.5 293 50.2
MBI19_g25361_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 5.6e-77 292.0 327 49.5
PGSC0003DMG400024036 Solanum tuberosum HOM05D006737 ORTHO05D008418 2.1e-76 290.0 146 95.2
arahy.Tifrunner.gnm1.ann1.B4PCIP Arachis hypogaea HOM05D006737 ORTHO05D008418 3.7e-76 289.3 271 52.4
CDE01G0235 Ceratophyllum demersum HOM05D006737 ORTHO05D008418 3.1e-75 286.2 319 47.6
Duzib138G1512 Durio zibethinus HOM05D006737 ORTHO05D008418 1.2e-74 284.3 244 55.7
Lalb_Chr02g0146391 Lupinus albus HOM05D006737 ORTHO05D008418 1.1e-72 277.7 263 50.6
AT4G02405 Arabidopsis thaliana HOM05D006737 ORTHO05D008418 5.5e-72 275.4 267 50.9
COL.COLO4_23338 Corchorus olitorius HOM05D006737 ORTHO05D008418 1.8e-70 270.4 216 60.6
Lj2A1195G25 Lonicera japonica HOM05D006737 ORTHO05D008418 1.1e-64 251.1 271 50.9
Os07g0247100 Oryza sativa ssp. japonica HOM05D006737 ORTHO05D008418 3.2e-64 249.6 300 44.7
Zm00001eb097030 Zea mays HOM05D006737 ORTHO05D008418 5.1e-62 242.3 297 43.4
Nitab4.5_0002820g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 7.4e-61 238.4 144 83.3
Sed0017513 Sechium edule HOM05D006737 ORTHO05D008418 6.5e-57 225.3 203 52.2
Pp3c24_12380 Physcomitrium patens HOM05D006737 ORTHO05D008418 5.3e-43 179.1 301 37.9
Oeu010666.1 Olea europaea HOM05D006737 ORTHO05D008418 5.9e-42 175.6 140 57.1
Dinv33057 Davidia involucrata HOM05D006737 ORTHO05D008418 1.5e-40 171.0 125 61.6
Mapoly0132s0018 Marchantia polymorpha HOM05D006737 ORTHO05D008418 3.4e-29 133.3 240 33.3
VMungo1383G3174 Vigna mungo HOM05D006737 ORTHO05D008418 9.8e-29 131.7 266 33.1
arahy.Tifrunner.gnm1.ann1.MB1A81 Arachis hypogaea HOM05D006737 ORTHO05D008418 2.3e-25 120.6 130 49.2
Dinv31287 Davidia involucrata HOM05D006737 ORTHO05D008418 4.4e-21 106.3 93 61.3
Dinv07247 Davidia involucrata HOM05D006737 ORTHO05D008418 1.3e-20 104.8 93 60.2
Dinv17961 Davidia involucrata HOM05D006737 ORTHO05D008418 9.2e-19 98.6 93 58.1
arahy.Tifrunner.gnm1.ann1.MU6BTE Arachis hypogaea HOM05D006737 ORTHO05D008418 2.0e-18 97.4 123 42.3
SEGI_39136 Sequoiadendron giganteum HOM05D006737 ORTHO05D008418 6.6e-17 92.4 142 36.6
BcaB01g02447 Brassica carinata HOM05D006737 ORTHO05D008418 2.4e-11 73.9 63 60.3
BcaB01g02050 Brassica carinata HOM05D006737 ORTHO05D008418 3.2e-11 73.6 108 41.7
Dinv02523 Davidia involucrata HOM05D006737 ORTHO05D008418 3.0e-09 67.0 61 59.0
MCO02G241 Micromonas commoda HOM05D006737 ORTHO05D008418 6.6e-09 65.9 220 25.5
Dinv32677 Davidia involucrata HOM05D006737 ORTHO05D008418 1.2e-07 61.6 54 57.4
Atru.chr9.1259 Acer truncatum HOM05D000593 ORTHO05D002268 1.8e-06 57.8 38 73.7
Atru.chr3.1390 Acer truncatum HOM05D000593 ORTHO05D000562 4.0e-06 56.6 38 71.1


User provided reference genes

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