Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g083100.2 Solanum lycopersicum HOM05D004954 ORTHO05D006267 0.0e+00 1180.6 598 100.0
Sopen06g034490 Solanum pennellii HOM05D004954 ORTHO05D006267 0.0e+00 1128.2 598 96.5
Sopen06g034480 Solanum pennellii HOM05D004954 ORTHO05D006267 0.0e+00 1090.9 601 92.8
Solyc06g083090.4 Solanum lycopersicum HOM05D004954 ORTHO05D006267 0.0e+00 1088.9 601 92.5
CAN.G874.27 Capsicum annuum HOM05D004954 ORTHO05D006267 0.0e+00 1077.4 601 91.5
Nitab4.5_0011983g0020 Nicotiana tabacum HOM05D004954 ORTHO05D006267 6.1e-298 1026.9 601 88.4
Nitab4.5_0002463g0060 Nicotiana tabacum HOM05D004954 ORTHO05D006267 3.7e-295 1017.7 601 87.7
Peaxi162Scf01242g00120 Petunia axillaris HOM05D004954 ORTHO05D006267 2.5e-291 1005.0 601 86.2
Cc01_g16190 Coffea canephora HOM05D004954 ORTHO05D006267 2.2e-271 938.7 600 78.8
CSS0025127 Camellia sinensis var. sinensis HOM05D004954 ORTHO05D006267 5.9e-269 930.6 602 78.4
Dinv10429 Davidia involucrata HOM05D004954 ORTHO05D006267 1.1e-267 926.4 601 78.7
SalBow6G4493 Salvia bowleyana HOM05D004954 ORTHO05D006267 1.5e-264 916.0 601 77.2
Rhsim13G0052400 Rhododendron simsii HOM05D004954 ORTHO05D006267 7.5e-264 913.7 626 74.3
Lj1C100T5 Lonicera japonica HOM05D004954 ORTHO05D006267 1.1e-262 909.8 602 78.1
Gohir.D07G166900 Gossypium hirsutum HOM05D004954 ORTHO05D006267 2.4e-262 908.7 602 76.2
Duzib211G0600 Durio zibethinus HOM05D004954 ORTHO05D006267 4.1e-262 907.9 602 76.9
Gorai.N003600 Gossypium raimondii HOM05D004954 ORTHO05D006267 4.1e-262 907.9 602 76.2
PGR044G2625 Punica granatum HOM05D004954 ORTHO05D006267 4.1e-262 907.9 601 75.5
Oeu003633.1 Olea europaea HOM05D004954 ORTHO05D006267 7.7e-261 903.7 601 77.0
CiPaw.13G054900 Carya illinoinensis HOM05D004954 ORTHO05D006267 1.0e-260 903.3 602 76.1
Gohir.A07G159500 Gossypium hirsutum HOM05D004954 ORTHO05D006267 1.0e-260 903.3 602 76.1
Thecc.01G211600 Theobroma cacao HOM05D004954 ORTHO05D006267 3.8e-260 901.4 602 76.4
CsaV3_7G026900 Cucumis sativus L. HOM05D004954 ORTHO05D006267 6.5e-260 900.6 601 75.5
MELO3C012723.2 Cucumis melo HOM05D004954 ORTHO05D006267 8.5e-260 900.2 601 75.7
Actinidia34548 Actinidia chinensis HOM05D004954 ORTHO05D006267 1.1e-259 899.8 601 75.4
Prupe.8G191000 Prunus persica HOM05D004954 ORTHO05D006267 1.1e-259 899.8 602 75.9
MSTRG.21308 Avicennia marina HOM05D004954 ORTHO05D006267 1.5e-259 899.4 602 76.2
Dinv28815 Davidia involucrata HOM05D004954 ORTHO05D006267 9.4e-259 896.7 602 76.1
QL09p046153 Quercus lobata HOM05D004954 ORTHO05D006267 1.2e-258 896.3 602 75.6
Sed0007567 Sechium edule HOM05D004954 ORTHO05D006267 4.7e-258 894.4 601 74.9
Eucgr.H00730 Eucalyptus grandis HOM05D004954 ORTHO05D006267 8.0e-258 893.6 601 75.2
ECA248G3210 Erigeron canadensis HOM05D004954 ORTHO05D006267 1.4e-257 892.9 602 75.2
MD10G1152500 Malus domestica HOM05D004954 ORTHO05D006267 5.2e-257 891.0 601 74.7
HanXRQChr01g0007231 Helianthus annuus HOM05D004954 ORTHO05D006267 2.6e-256 888.6 603 74.8
TWI18G0293 Tripterygium wilfordii HOM05D004954 ORTHO05D006267 7.5e-256 887.1 602 74.6
RcHm_v2.0_Chr6g0282881 Rosa chinensis HOM05D004954 ORTHO05D006267 9.8e-256 886.7 601 74.5
FAN24G2804 Fragaria x ananassa HOM05D004954 ORTHO05D006267 1.3e-255 886.3 611 73.8
THA.LOC104818994 Tarenaya hassleriana HOM05D004954 ORTHO05D006267 1.3e-255 886.3 601 74.7
CANSAT01G1324 Cannabis sativa HOM05D004954 ORTHO05D006267 2.8e-255 885.2 602 74.1
Potri.014G191100 Populus trichocarpa HOM05D004954 ORTHO05D006267 3.7e-255 884.8 601 74.9
Actinidia23789 Actinidia chinensis HOM05D004954 ORTHO05D006267 4.9e-255 884.4 640 71.6
DCAR_012691 Daucus carota HOM05D004954 ORTHO05D006267 1.1e-254 883.2 605 74.7
ClCG09G008140 Citrullus lanatus HOM05D004954 ORTHO05D006267 1.8e-254 882.5 601 74.5
SGA_v2.0_scaffold29G12103 Striga asiatica HOM05D004954 ORTHO05D006267 5.4e-254 880.9 576 77.1
CSS0003762 Camellia sinensis var. sinensis HOM05D004954 ORTHO05D006267 7.0e-254 880.6 602 74.8
FAN27G0710 Fragaria x ananassa HOM05D004954 ORTHO05D006267 2.9e-252 875.2 612 73.0
Atru.chr5.2285 Acer truncatum HOM05D004954 ORTHO05D006267 6.6e-252 874.0 602 73.4
A06p39130 Brassica napus HOM05D004954 ORTHO05D006267 8.6e-252 873.6 601 73.5
EL10Ac5g10627 Beta vulgaris HOM05D004954 ORTHO05D006267 1.5e-251 872.8 601 72.7
C07p39210 Brassica napus HOM05D004954 ORTHO05D006267 1.5e-251 872.8 601 73.4
AT5G48520 Arabidopsis thaliana HOM05D004954 ORTHO05D006267 7.2e-251 870.5 601 73.7
BolC7t44441H Brassica oleracea HOM05D004954 ORTHO05D006267 7.2e-251 870.5 601 73.2
Thhalv10003836m.g Eutrema salsugineum HOM05D004954 ORTHO05D006267 8.0e-250 867.1 601 73.4
Sp2g18880 Schrenkiella parvula HOM05D004954 ORTHO05D006267 6.8e-249 864.0 601 73.2
PSO170G3087 Papaver somniferum HOM05D004954 ORTHO05D006267 1.5e-248 862.8 597 72.2
Carub.0008s0810 Capsella rubella HOM05D004954 ORTHO05D006267 2.6e-248 862.1 601 73.0
PSO063G7187 Papaver somniferum HOM05D004954 ORTHO05D006267 2.6e-248 862.1 597 72.0
Hund09467 Selenicereus undatus HOM05D004954 ORTHO05D006267 4.4e-248 861.3 601 72.5
Ciclev10004559m.g Citrus clementina HOM05D004954 ORTHO05D006267 5.7e-248 860.9 602 72.8
Migut.D00727 Erythranthe guttata HOM05D004954 ORTHO05D006267 2.2e-247 859.0 601 73.7
Glyma.17G145700 Glycine max HOM05D004954 ORTHO05D006267 6.4e-247 857.4 603 72.8
Ah.11g051040 Amaranthus hybridus HOM05D004954 ORTHO05D006267 2.4e-246 855.5 628 69.6
Lalb_Chr19g0124251 Lupinus albus HOM05D004954 ORTHO05D006267 7.0e-246 854.0 601 71.9
Nn8g39913 Nelumbo nucifera HOM05D004954 ORTHO05D006267 2.7e-245 852.0 602 71.8
Phvul.003G003500 Phaseolus vulgaris HOM05D004954 ORTHO05D006267 4.6e-245 851.3 602 72.1
vmacro21304 Vaccinium macrocarpon HOM05D004954 ORTHO05D006267 4.6e-245 851.3 737 62.7
VMungo0251G2039 Vigna mungo HOM05D004954 ORTHO05D006267 4.6e-245 851.3 602 72.1
arahy.Tifrunner.gnm1.ann1.4YG7MF Arachis hypogaea HOM05D004954 ORTHO05D006267 7.8e-245 850.5 602 72.1
arahy.Tifrunner.gnm1.ann1.E22JQ7 Arachis hypogaea HOM05D004954 ORTHO05D006267 7.8e-245 850.5 602 72.1
BraA06t26827Z Brassica rapa HOM05D004954 ORTHO05D006267 7.8e-245 850.5 634 69.6
Manes.13G054100 Manihot esculenta HOM05D004954 ORTHO05D006267 7.8e-245 850.5 543 78.3
Haze_25215 Corylus avellana HOM05D004954 ORTHO05D006267 2.3e-244 849.0 668 67.1
BcaC06g30786 Brassica carinata HOM05D004954 ORTHO05D006267 9.5e-243 843.6 601 71.5
unitig_37.g12142 Utricularia gibba HOM05D004954 ORTHO05D006267 1.6e-242 842.8 601 71.0
Aqoxy7G02924 Aquilegia oxysepala HOM05D004954 ORTHO05D006267 1.4e-241 839.7 600 71.0
MBI18_g30537_MAGBIO Magnolia biondii HOM05D004954 ORTHO05D006267 1.4e-241 839.7 615 69.6
TPR.G29775 Trifolium pratense HOM05D004954 ORTHO05D006267 5.8e-240 834.3 607 70.0
Medtr1g038570 Medicago truncatula HOM05D004954 ORTHO05D006267 1.3e-239 833.2 607 69.7
Lj2g0006494 Lotus japonicus HOM05D004954 ORTHO05D006267 2.4e-238 828.9 601 70.0
Aa31sc420G20 Aethionema arabicum HOM05D004954 ORTHO05D006267 9.2e-238 827.0 576 72.7
TAR375G0531 Trochodendron aralioides HOM05D004954 ORTHO05D006267 1.9e-235 819.3 641 66.3
DCAR_018627 Daucus carota HOM05D004954 ORTHO05D006267 4.7e-234 814.7 602 69.9
FvH4_2g17860 Fragaria vesca HOM05D004954 ORTHO05D006267 8.3e-231 803.9 518 77.2
Cfa002884 Carpinus fangiana HOM05D004954 ORTHO05D006267 1.1e-230 803.5 518 76.8
ATR0824G007 Amborella trichopoda HOM05D004954 ORTHO05D006267 1.9e-230 802.7 602 66.9
AUR62008123 Chenopodium quinoa HOM05D004954 ORTHO05D006267 1.9e-230 802.7 617 67.9
AUR62028702 Chenopodium quinoa HOM05D004954 ORTHO05D006267 5.1e-228 794.7 601 68.1
HPP92_017515 Vanilla planifolia HOM05D004954 ORTHO05D006267 4.1e-222 775.0 602 64.8
CDE04G1241 Ceratophyllum demersum HOM05D004954 ORTHO05D006267 2.6e-216 755.7 602 65.4
Psat6g025280 Pisum sativum HOM05D004954 ORTHO05D006267 2.4e-214 749.2 567 68.1
Ca_12404_v3 Cicer arietinum L. HOM05D004954 ORTHO05D006267 6.2e-210 734.6 607 63.8
Sc17g0001680 Simmondsia chinensis HOM05D004954 ORTHO05D006267 5.3e-209 731.5 470 77.4
Os06g0186500 Oryza sativa ssp. japonica HOM05D004954 ORTHO05D006267 6.9e-209 731.1 603 61.5
Sabra14G0144200 Salix brachista HOM05D004954 ORTHO05D006267 3.6e-202 708.8 497 73.0
FAN15G2379 Fragaria x ananassa HOM05D004954 ORTHO05D006267 1.2e-197 693.7 559 65.3
Lsat_1_v5_gn_5_178381 Lactuca sativa HOM05D004954 ORTHO05D006267 1.6e-197 693.3 524 70.0
Pp3c20_5680 Physcomitrium patens HOM05D004954 ORTHO05D006267 1.8e-188 663.3 602 54.8
SMO367G0402 Selaginella moellendorffii HOM05D004954 ORTHO05D006267 4.3e-187 658.7 606 55.6
Atru.chr12.963 Acer truncatum HOM05D004954 ORTHO05D006267 3.1e-185 652.5 430 76.0
Mapoly0098s0023 Marchantia polymorpha HOM05D004954 ORTHO05D006267 4.1e-177 625.5 601 53.2
AagrBONN_evm.TU.Sc2ySwM_344.252 Anthoceros agrestis HOM05D004954 ORTHO05D006267 2.8e-162 576.2 633 47.7
Os07g0185700 Oryza sativa ssp. japonica HOM05D004954 ORTHO05D006267 1.1e-145 521.2 603 47.3
Cpa.g.sc8.76 Carica papaya HOM05D004954 ORTHO05D006267 8.0e-141 505.0 345 75.4
Zm00001eb301770 Zea mays HOM05D004954 ORTHO05D006267 1.7e-138 497.3 604 44.5
CARHR183510 Cardamine hirsuta HOM05D004954 ORTHO05D006267 2.3e-135 486.9 345 73.6
COL.COLO4_03294 Corchorus olitorius HOM05D004954 ORTHO05D006267 2.8e-133 479.9 324 75.6
Zm00001eb278340 Zea mays HOM05D004954 ORTHO05D006267 2.7e-128 463.4 366 63.7
GSVIVG01006234001 Vitis vinifera HOM05D004954 ORTHO05D006267 3.0e-127 459.9 471 56.9
arahy.Tifrunner.gnm1.ann1.R4R8P3 Arachis hypogaea HOM05D004954 ORTHO05D006267 8.6e-127 458.4 379 63.9
SMO302G0009 Selaginella moellendorffii HOM05D004954 ORTHO05D006267 2.3e-108 397.1 594 42.3
CBR_g32699 Chara braunii HOM05D004954 ORTHO05D006267 9.2e-105 385.2 497 42.5
MD05G1162300 Malus domestica HOM05D004954 ORTHO05D006267 1.6e-104 384.4 376 57.7
vmacro21300 Vaccinium macrocarpon HOM05D004954 ORTHO05D006267 1.7e-90 337.8 266 66.9
MD05G1161600 Malus domestica HOM05D004954 ORTHO05D006267 2.3e-79 300.8 441 45.1
GSVIVG01002254001 Vitis vinifera HOM05D004954 ORTHO05D006267 3.3e-70 270.4 175 77.7
COL.COLO4_03295 Corchorus olitorius HOM05D004954 ORTHO05D006267 6.3e-69 266.2 171 78.4
SEGI_36119 Sequoiadendron giganteum HOM05D004954 ORTHO05D006267 1.1e-65 255.4 186 66.7
FAN15G2507 Fragaria x ananassa HOM05D004954 ORTHO05D006267 1.5e-54 218.4 131 80.2
Cpa.g.sc8.77 Carica papaya HOM05D004954 ORTHO05D006267 3.3e-46 190.7 117 77.8
Atru.chr12.964 Acer truncatum HOM05D004954 ORTHO05D006267 4.1e-44 183.7 150 61.3
MD05G1161700 Malus domestica HOM05D004954 ORTHO05D006267 2.0e-43 181.4 122 74.6
MBI18_g37244_MAGBIO Magnolia biondii HOM05D004954 ORTHO05D006267 5.9e-43 179.9 105 79.0
SEGI_30399 Sequoiadendron giganteum HOM05D004954 ORTHO05D006267 1.3e-42 178.7 135 65.2
Sabra14G0144300 Salix brachista HOM05D004954 ORTHO05D006267 1.1e-41 175.6 106 78.3
FAN15G2003 Fragaria x ananassa HOM05D004954 ORTHO05D006267 1.8e-36 158.3 134 62.7
Sc17g0001690 Simmondsia chinensis HOM05D004954 ORTHO05D006267 2.4e-36 157.9 125 66.4
Ca_12408_v3 Cicer arietinum L. HOM05D004954 ORTHO05D006267 2.7e-35 154.5 178 48.3
VMungo0647G1109 Vigna mungo HOM05D004954 ORTHO05D006267 5.7e-30 136.7 100 72.0
PGSC0003DMG400008807 Solanum tuberosum HOM05D004954 ORTHO05D006267 2.3e-26 124.8 58 96.6
PGSC0003DMG400020114 Solanum tuberosum HOM05D004954 ORTHO05D006267 2.3e-26 124.8 58 96.6
MD05G1160200 Malus domestica HOM05D004954 ORTHO05D006267 9.5e-25 119.4 88 71.6
CBR_g49514 Chara braunii HOM05D000019 ORTHO05D001702 2.8e-24 117.9 107 52.3
MD05G1162200 Malus domestica HOM05D004954 ORTHO05D006267 2.2e-21 108.2 58 81.0
VMungo0647G2582 Vigna mungo HOM05D004954 ORTHO05D006267 6.3e-21 106.7 87 64.4
VMungo0464G0043 Vigna mungo HOM05D004954 ORTHO05D006267 2.0e-19 101.7 78 60.3
QL09p053445 Quercus lobata HOM05D004954 ORTHO05D030058 7.8e-19 99.8 104 61.5
VMungo0720G1677 Vigna mungo HOM05D002055 ORTHO05D002120 3.8e-18 97.4 58 72.4
SEGI_32998 Sequoiadendron giganteum HOM05D004954 ORTHO05D006267 5.0e-18 97.1 86 61.6
Hma1.2p1_0066F.1_g035760 Hydrangea macrophylla HOM05D004954 ORTHO05D006267 4.3e-17 94.0 69 59.4
Ciclev10018232m.g Citrus clementina HOM05D004954 ORTHO05D006267 9.5e-17 92.8 76 65.8
Glyma.09G284100 Glycine max HOM05D004954 ORTHO05D006267 8.9e-15 86.3 50 74.0
MD05G1162500 Malus domestica HOM05D004954 ORTHO05D006267 1.3e-10 72.4 80 47.5
CSS0000571 Camellia sinensis var. sinensis HOM05D004954 ORTHO05D014145 3.3e-09 67.8 46 76.1
Medtr3g114845 Medicago truncatula HOM05D004954 ORTHO05D006267 4.3e-09 67.4 51 52.9
SEGI_31941 Sequoiadendron giganteum HOM05D004954 ORTHO05D006267 1.6e-08 65.5 39 71.8
Ca_12409_v3 Cicer arietinum L. HOM05D004954 ORTHO05D006267 2.0e-06 58.5 56 53.6


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