Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g076140.4 Solanum lycopersicum HOM05D002160 ORTHO05D002012 2.7e-41 171.8 102 100.0
PGSC0003DMG400030321 Solanum tuberosum HOM05D002160 ORTHO05D002012 1.3e-22 109.8 75 98.7
Sopen06g032540 Solanum pennellii HOM05D002160 ORTHO05D002012 2.8e-22 108.6 78 92.3
CAN.G394.56 Capsicum annuum HOM05D002160 ORTHO05D002012 1.2e-20 103.2 78 79.5
Peaxi162Scf00774g00011 Petunia axillaris HOM05D002160 ORTHO05D002012 1.6e-20 102.8 78 91.0
Peaxi162Scf00946g00028 Petunia axillaris HOM05D002160 ORTHO05D002012 7.3e-18 94.0 78 75.6
Nitab4.5_0002557g0020 Nicotiana tabacum HOM05D002160 ORTHO05D002012 4.7e-17 91.3 75 85.3
CAN.G405.1 Capsicum annuum HOM05D002160 ORTHO05D002012 1.4e-16 89.7 76 73.7
Solyc04g058150.3 Solanum lycopersicum HOM05D002160 ORTHO05D002012 2.3e-16 89.0 75 86.7
Sopen04g026050 Solanum pennellii HOM05D002160 ORTHO05D002012 2.3e-16 89.0 75 86.7
Sopen04g025910 Solanum pennellii HOM05D002160 ORTHO05D002012 2.0e-15 85.9 74 77.0
Solyc04g058100.3 Solanum lycopersicum HOM05D002160 ORTHO05D002012 4.4e-15 84.7 75 78.7
Nitab4.5_0000317g0020 Nicotiana tabacum HOM05D002160 ORTHO05D002012 2.2e-14 82.4 99 55.6
Dinv17000 Davidia involucrata HOM05D002160 ORTHO05D002012 3.7e-14 81.6 78 67.9
Dinv42949 Davidia involucrata HOM05D002160 ORTHO05D002012 3.7e-14 81.6 78 67.9
Dinv43151 Davidia involucrata HOM05D002160 ORTHO05D002012 3.7e-14 81.6 78 67.9
Dinv12424 Davidia involucrata HOM05D002160 ORTHO05D002012 1.8e-13 79.3 78 66.7
Solyc06g005465.1 Solanum lycopersicum HOM05D002160 ORTHO05D002012 1.8e-13 79.3 78 67.9
CAN.G111.42 Capsicum annuum HOM05D002160 ORTHO05D002012 7.8e-12 73.9 78 65.4
Hma1.2p1_0418F.1_g149080 Hydrangea macrophylla HOM05D002160 ORTHO05D002012 7.8e-12 73.9 79 63.3
Nitab4.5_0022803g0010 Nicotiana tabacum HOM05D002160 ORTHO05D002012 1.0e-11 73.6 75 69.3
Sopen06g001440 Solanum pennellii HOM05D002160 ORTHO05D002012 1.3e-11 73.2 78 65.4
Hma1.2p1_0035F.1_g022400 Hydrangea macrophylla HOM05D002160 ORTHO05D002012 1.7e-11 72.8 79 60.8
CSS0001348 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 5.0e-11 71.2 79 62.0
CSS0035762 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 1.1e-10 70.1 80 62.5
HanXRQChr11g0350841 Helianthus annuus HOM05D002160 ORTHO05D002012 2.5e-10 68.9 78 59.0
MBI14_g20107_MAGBIO Magnolia biondii HOM05D002160 ORTHO05D002012 3.3e-10 68.6 80 60.0
TAR633G1907 Trochodendron aralioides HOM05D002160 ORTHO05D002012 4.3e-10 68.2 83 59.0
Rhsim04G0157100 Rhododendron simsii HOM05D002160 ORTHO05D002012 7.3e-10 67.4 73 60.3
Actinidia26465 Actinidia chinensis HOM05D002160 ORTHO05D002012 9.5e-10 67.0 79 62.0
CiPaw.09G192500 Carya illinoinensis HOM05D002160 ORTHO05D002012 1.6e-09 66.2 77 59.7
Hma1.2p1_0035F.1_g022410 Hydrangea macrophylla HOM05D002160 ORTHO05D002012 1.6e-09 66.2 81 48.1
QL07p048278 Quercus lobata HOM05D002160 ORTHO05D002012 1.6e-09 66.2 79 55.7
Dinv37174 Davidia involucrata HOM05D002160 ORTHO05D002012 3.6e-09 65.1 80 58.8
ECA247G1660 Erigeron canadensis HOM05D002160 ORTHO05D002012 3.6e-09 65.1 78 55.1
Haze_20789 Corylus avellana HOM05D002160 ORTHO05D002012 4.7e-09 64.7 84 65.5
Gorai.002G257700 Gossypium raimondii HOM05D002160 ORTHO05D002012 4.7e-09 64.7 77 58.4
Cfa017382 Carpinus fangiana HOM05D002160 ORTHO05D002012 8.0e-09 63.9 103 55.3
Nitab4.5_0003635g0040 Nicotiana tabacum HOM05D002160 ORTHO05D002012 8.0e-09 63.9 66 51.5
Cc01_g12850 Coffea canephora HOM05D002160 ORTHO05D002012 1.1e-08 63.5 77 51.9
QL07p048273 Quercus lobata HOM05D002160 ORTHO05D002012 1.1e-08 63.5 79 59.5
Manes.02G133200 Manihot esculenta HOM05D002160 ORTHO05D002012 1.4e-08 63.2 77 67.5
Potri.001G239650 Populus trichocarpa HOM05D002160 ORTHO05D002012 1.4e-08 63.2 77 58.4
Atru.chr3.3902 Acer truncatum HOM05D002160 ORTHO05D002012 1.8e-08 62.8 79 57.0
Duzib106G1044 Durio zibethinus HOM05D002160 ORTHO05D002012 1.8e-08 62.8 77 55.8
ECA236G3652 Erigeron canadensis HOM05D002160 ORTHO05D002012 1.8e-08 62.8 79 53.2
Gohir.A01G222400 Gossypium hirsutum HOM05D002160 ORTHO05D002012 1.8e-08 62.8 77 57.1
CiPaw.10G145500 Carya illinoinensis HOM05D002160 ORTHO05D002012 2.3e-08 62.4 80 52.5
CiPaw.13G094600 Carya illinoinensis HOM05D002160 ORTHO05D002012 2.3e-08 62.4 82 58.5
DCAR_005972 Daucus carota HOM05D002160 ORTHO05D002012 2.3e-08 62.4 60 68.3
Lsat_1_v5_gn_9_23460 Lactuca sativa HOM05D002160 ORTHO05D002012 2.3e-08 62.4 78 51.3
TAR369G0024 Trochodendron aralioides HOM05D002160 ORTHO05D002012 2.3e-08 62.4 78 59.0
Gohir.A04G082400 Gossypium hirsutum HOM05D002160 ORTHO05D002012 3.1e-08 62.0 77 58.4
Gohir.D04G121400 Gossypium hirsutum HOM05D002160 ORTHO05D002012 3.1e-08 62.0 77 58.4
BcaC05g29516 Brassica carinata HOM05D002160 ORTHO05D002012 4.0e-08 61.6 79 58.2
Duzib093G1046 Durio zibethinus HOM05D002160 ORTHO05D002012 4.0e-08 61.6 77 57.1
Oeu007792.1 Olea europaea HOM05D002160 ORTHO05D002012 4.0e-08 61.6 80 52.5
Gorai.012G103800 Gossypium raimondii HOM05D002160 ORTHO05D002012 5.2e-08 61.2 77 58.4
Potri.009G030800 Populus trichocarpa HOM05D002160 ORTHO05D002012 5.2e-08 61.2 81 56.8
Lj3g0021630 Lotus japonicus HOM05D002160 ORTHO05D002012 6.8e-08 60.8 82 57.3
GSVIVG01034174001 Vitis vinifera HOM05D002160 ORTHO05D002012 6.8e-08 60.8 78 56.4
VMungo1383G3367 Vigna mungo HOM05D002160 ORTHO05D002012 8.9e-08 60.5 78 57.7
CSS0038374 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 1.2e-07 60.1 77 54.5
Glyma.07G132000 Glycine max HOM05D002160 ORTHO05D002012 1.2e-07 60.1 78 57.7
MD12G1141500 Malus domestica HOM05D002160 ORTHO05D002012 1.2e-07 60.1 81 55.6
PSO339G1859 Papaver somniferum HOM05D002160 ORTHO05D002012 1.2e-07 60.1 84 52.4
Prupe.6G255100 Prunus persica HOM05D002160 ORTHO05D002012 1.2e-07 60.1 76 55.3
AL6G11600 Arabidopsis lyrata HOM05D002160 ORTHO05D002012 1.5e-07 59.7 76 55.3
Carub.0003s0850 Capsella rubella HOM05D002160 ORTHO05D002012 1.5e-07 59.7 82 58.5
Carub.0006s0117 Capsella rubella HOM05D002160 ORTHO05D002012 1.5e-07 59.7 76 55.3
COL.COLO4_14799 Corchorus olitorius HOM05D002160 ORTHO05D002012 1.5e-07 59.7 77 57.1
Rhsim05G0192600 Rhododendron simsii HOM05D002160 ORTHO05D002012 1.5e-07 59.7 79 57.0
CSS0020810 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 4.4e-07 58.2 61 68.9
Os01g0149800 Oryza sativa ssp. japonica HOM05D002160 ORTHO05D002012 4.4e-07 58.2 80 61.2
Phvul.008G101800 Phaseolus vulgaris HOM05D002160 ORTHO05D002012 4.4e-07 58.2 78 56.4
THA.LOC104816271 Tarenaya hassleriana HOM05D002160 ORTHO05D002012 4.4e-07 58.2 80 55.0
Nitab4.5_0006455g0010 Nicotiana tabacum HOM05D002160 ORTHO05D002012 5.8e-07 57.8 81 56.8
PSO151G0128 Papaver somniferum HOM05D002160 ORTHO05D002012 5.8e-07 57.8 58 63.8
PSO339G1421 Papaver somniferum HOM05D002160 ORTHO05D002012 5.8e-07 57.8 58 63.8
AT5G02380 Arabidopsis thaliana HOM05D002160 ORTHO05D002012 7.5e-07 57.4 76 53.9
Hma1.2p1_0418F.1_g149100 Hydrangea macrophylla HOM05D002160 ORTHO05D002012 9.8e-07 57.0 79 58.2
CSS0042900 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 1.3e-06 56.6 77 53.2
Eucgr.J02054 Eucalyptus grandis HOM05D002160 ORTHO05D002012 1.3e-06 56.6 57 64.9
Actinidia05312 Actinidia chinensis HOM05D002160 ORTHO05D002012 1.7e-06 56.2 78 55.1
CSS0041171 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 1.7e-06 56.2 46 80.4
CANSAT35G0429 Cannabis sativa HOM05D002160 ORTHO05D002012 1.7e-06 56.2 78 55.1
Gohir.D01G211900 Gossypium hirsutum HOM05D002160 ORTHO05D002012 1.7e-06 56.2 81 54.3
MBI14_g20106_MAGBIO Magnolia biondii HOM05D002160 ORTHO05D002012 2.2e-06 55.8 51 74.5
CARHR211040 Cardamine hirsuta HOM05D002160 ORTHO05D002012 3.7e-06 55.1 77 53.2
CiPaw.14G068500 Carya illinoinensis HOM05D002160 ORTHO05D002012 3.7e-06 55.1 77 42.9
MD04G1128900 Malus domestica HOM05D002160 ORTHO05D002012 4.9e-06 54.7 76 52.6
A01p42320 Brassica napus HOM05D000351 ORTHO05D000250 8.3e-06 53.9 81 53.1
Thecc.05G039800 Theobroma cacao HOM05D002160 ORTHO05D002012 8.3e-06 53.9 84 52.4


User provided reference genes

Program Settings