Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g075920.2 Solanum lycopersicum HOM05D008565 ORTHO05D026158 3.9e-127 458.8 352 100.0
PGSC0003DMG400044843 Solanum tuberosum HOM05D008565 ORTHO05D017126 3.7e-45 186.4 358 44.4
Sopen06g032350 Solanum pennellii HOM05D008565 ORTHO05D026158 1.8e-31 141.0 303 48.8
PGSC0003DMG400036779 Solanum tuberosum HOM05D008565 ORTHO05D017126 6.6e-26 122.5 139 48.9
Solyc04g057920.1 Solanum lycopersicum HOM05D008565 ORTHO05D018131 5.6e-25 119.4 115 52.2
PGSC0003DMG400045401 Solanum tuberosum HOM05D008565 ORTHO05D017126 9.5e-25 118.6 136 47.8
Sopen04g025770 Solanum pennellii HOM05D008565 ORTHO05D018131 6.2e-24 115.9 119 52.1
Solyc04g057910.4 Solanum lycopersicum HOM05D008565 ORTHO05D018131 2.3e-23 114.0 120 50.8
PGSC0003DMG400045398 Solanum tuberosum HOM05D008565 ORTHO05D017126 8.9e-23 112.1 137 45.3
Solyc06g075720.3 Solanum lycopersicum HOM05D008565 ORTHO05D017126 2.2e-21 107.5 139 46.0
Sopen04g025780 Solanum pennellii HOM05D008565 ORTHO05D018131 1.9e-17 94.4 95 50.5
Sopen06g032110 Solanum pennellii HOM05D008565 ORTHO05D017126 3.3e-17 93.6 128 39.1
Sopen06g032120 Solanum pennellii HOM05D008565 ORTHO05D017126 4.3e-17 93.2 110 48.2
Sopen06g032180 Solanum pennellii HOM05D008565 ORTHO05D011266 5.6e-17 92.8 131 42.7
PGSC0003DMG400041447 Solanum tuberosum HOM05D012723 ORTHO05D011266 5.6e-17 92.8 136 36.8
Solyc04g057900.1 Solanum lycopersicum HOM05D008565 ORTHO05D018131 1.2e-16 91.7 113 45.1
Solyc06g075870.1 Solanum lycopersicum HOM05D008565 ORTHO05D021008 2.1e-16 90.9 119 43.7
Sopen06g032290 Solanum pennellii HOM05D008565 ORTHO05D021008 2.1e-16 90.9 119 43.7
PGSC0003DMG400039884 Solanum tuberosum HOM05D008565 ORTHO05D018131 3.6e-16 90.1 92 52.2
Sopen06g032190 Solanum pennellii HOM05D008565 ORTHO05D051169 6.2e-16 89.4 118 36.4
Solyc06g075770.1 Solanum lycopersicum HOM05D008565 ORTHO05D051169 2.3e-15 87.4 114 36.8
Sopen04g025760 Solanum pennellii HOM05D008565 ORTHO05D018131 2.3e-15 87.4 113 42.5
PGSC0003DMG400039447 Solanum tuberosum HOM05D008565 ORTHO05D021008 5.2e-15 86.3 122 44.3
PGSC0003DMG400041339 Solanum tuberosum HOM05D008565 ORTHO05D011266 8.9e-15 85.5 103 45.6
Solyc06g075880.1 Solanum lycopersicum HOM05D008565 ORTHO05D021008 1.5e-14 84.7 129 41.9
PGSC0003DMG400034401 Solanum tuberosum HOM05D008565 ORTHO05D018131 2.6e-14 84.0 113 44.2
Nitab4.5_0001304g0010 Nicotiana tabacum HOM05D008565 ORTHO05D011266 1.1e-12 78.6 90 45.6
Nitab4.5_0009655g0020 Nicotiana tabacum HOM05D008565 ORTHO05D011266 1.1e-12 78.6 124 38.7
Solyc06g075820.1 Solanum lycopersicum HOM05D008565 ORTHO05D011266 4.1e-12 76.6 101 37.6
CAN.G394.39 Capsicum annuum HOM05D008565 ORTHO05D011266 5.4e-12 76.3 109 43.1
CAN.G394.29 Capsicum annuum HOM05D008565 ORTHO05D011266 7.1e-12 75.9 86 45.3
CAN.G394.31 Capsicum annuum HOM05D008565 ORTHO05D011266 1.2e-11 75.1 103 36.9
Solyc06g075950.2 Solanum lycopersicum HOM05D008565 ORTHO05D011266 1.6e-11 74.7 136 36.0
PGSC0003DMG400035336 Solanum tuberosum HOM05D008565 ORTHO05D018131 1.6e-11 74.7 117 40.2
PGSC0003DMG400043558 Solanum tuberosum HOM05D012723 ORTHO05D011266 3.5e-11 73.6 138 34.8
Sopen06g032250 Solanum pennellii HOM05D008565 ORTHO05D011266 7.8e-11 72.4 99 36.4
PGSC0003DMG400004155 Solanum tuberosum HOM05D008565 ORTHO05D011266 1.7e-10 71.2 138 33.3
PGSC0003DMG400039648 Solanum tuberosum HOM05D008565 ORTHO05D017126 1.7e-10 71.2 99 40.4
PGSC0003DMG400041091 Solanum tuberosum HOM05D012723 ORTHO05D011266 2.3e-10 70.9 129 34.9
PGSC0003DMG400004157 Solanum tuberosum HOM05D008565 ORTHO05D011266 3.0e-10 70.5 109 35.8
PGSC0003DMG400045046 Solanum tuberosum HOM05D008565 ORTHO05D017126 1.1e-09 68.6 88 42.0
Actinidia26304 Actinidia chinensis HOM05D010595 ORTHO05D011290 1.9e-09 67.8 97 33.0
Actinidia37221 Actinidia chinensis HOM05D010595 ORTHO05D011290 1.9e-09 67.8 111 33.3
CiPaw.14G071600 Carya illinoinensis HOM05D010595 ORTHO05D011290 1.2e-08 65.1 116 31.9
PGSC0003DMG400043572 Solanum tuberosum HOM05D008565 ORTHO05D011266 1.1e-07 62.0 68 42.6
CANSAT21G0288 Cannabis sativa HOM05D000553 ORTHO05D000460 6.8e-07 59.3 98 30.6
CiPaw.05G199000 Carya illinoinensis HOM05D000553 ORTHO05D000460 1.2e-06 58.5 99 29.3
CiPaw.05G199800 Carya illinoinensis HOM05D000553 ORTHO05D000460 1.2e-06 58.5 99 30.3
Sopen06g032370 Solanum pennellii HOM05D017346 ORTHO05D011266 2.0e-06 57.8 94 35.1
Peaxi162Scf00679g00136 Petunia axillaris HOM05D008565 ORTHO05D011266 2.6e-06 57.4 102 33.3
Actinidia37222 Actinidia chinensis HOM05D010595 ORTHO05D011290 3.4e-06 57.0 101 30.7
PGSC0003DMG400040747 Solanum tuberosum HOM05D012723 ORTHO05D011266 4.4e-06 56.6 125 32.8
Solyc06g075710.1 Solanum lycopersicum HOM05D008565 ORTHO05D017126 5.8e-06 56.2 66 42.4
Sopen06g032160 Solanum pennellii HOM05D012723 ORTHO05D011266 5.8e-06 56.2 132 30.3
CiPaw.01G249500 Carya illinoinensis HOM05D000553 ORTHO05D000460 7.6e-06 55.8 100 33.0
GSVIVG01038595001 Vitis vinifera HOM05D000553 ORTHO05D000460 9.9e-06 55.5 90 34.4


User provided reference genes

Program Settings