Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g075910.1 Solanum lycopersicum HOM05D012723 ORTHO05D011266 2.1e-88 328.9 157 100.0
Sopen06g032320 Solanum pennellii HOM05D012723 ORTHO05D011266 5.9e-59 231.1 157 77.1
PGSC0003DMG400041447 Solanum tuberosum HOM05D012723 ORTHO05D011266 3.6e-32 142.1 140 55.0
Sopen06g032340 Solanum pennellii HOM05D012723 ORTHO05D011266 5.9e-27 124.8 135 48.9
Solyc06g075900.1 Solanum lycopersicum HOM05D035698 ORTHO05D011266 8.5e-26 120.9 102 53.9
Sopen06g032300 Solanum pennellii HOM05D035698 ORTHO05D011266 1.5e-25 120.2 102 52.9
PGSC0003DMG400043558 Solanum tuberosum HOM05D012723 ORTHO05D011266 4.7e-24 115.2 144 48.6
Sopen06g032160 Solanum pennellii HOM05D012723 ORTHO05D011266 1.8e-20 103.2 146 47.3
Solyc06g075700.2 Solanum lycopersicum HOM05D012723 ORTHO05D011266 2.3e-18 96.3 147 41.5
Sopen06g032100 Solanum pennellii HOM05D012723 ORTHO05D011266 2.3e-18 96.3 148 40.5
PGSC0003DMG400040747 Solanum tuberosum HOM05D012723 ORTHO05D011266 1.1e-17 94.0 143 44.8
PGSC0003DMG400041091 Solanum tuberosum HOM05D012723 ORTHO05D011266 1.6e-16 90.1 131 39.7
Solyc06g075890.1 Solanum lycopersicum HOM05D012723 ORTHO05D011266 1.8e-15 86.7 150 39.3
Solyc06g075430.3 Solanum lycopersicum HOM05D039704 ORTHO05D024760 2.2e-13 79.7 176 33.5
PGSC0003DMG400039447 Solanum tuberosum HOM05D008565 ORTHO05D021008 2.8e-13 79.3 131 39.7
Solyc06g075880.1 Solanum lycopersicum HOM05D008565 ORTHO05D021008 8.3e-13 77.8 141 39.0
CAN.G394.36 Capsicum annuum HOM05D012723 ORTHO05D011266 1.1e-12 77.4 133 38.3
Sopen06g032290 Solanum pennellii HOM05D008565 ORTHO05D021008 3.1e-12 75.9 150 36.7
Solyc03g115970.2 Solanum lycopersicum HOM05D008565 ORTHO05D021008 5.4e-12 75.1 149 38.9
CAN.G394.29 Capsicum annuum HOM05D008565 ORTHO05D011266 2.0e-11 73.2 114 41.2
Nitab4.5_0009655g0020 Nicotiana tabacum HOM05D008565 ORTHO05D011266 5.9e-11 71.6 100 38.0
Sopen06g032190 Solanum pennellii HOM05D008565 ORTHO05D051169 1.0e-10 70.9 142 35.2
Sopen06g032270 Solanum pennellii HOM05D017346 ORTHO05D024760 1.3e-10 70.5 128 33.6
Solyc06g075840.1 Solanum lycopersicum HOM05D017346 ORTHO05D024760 1.7e-10 70.1 128 34.4
Sopen03g034960 Solanum pennellii HOM05D008565 ORTHO05D021008 1.7e-10 70.1 145 37.2
Nitab4.5_0001304g0010 Nicotiana tabacum HOM05D008565 ORTHO05D011266 5.0e-10 68.6 93 37.6
CAN.G394.42 Capsicum annuum HOM05D017346 ORTHO05D024760 1.1e-09 67.4 125 32.0
Sopen04g025770 Solanum pennellii HOM05D008565 ORTHO05D018131 1.5e-09 67.0 139 38.1
Sopen06g032250 Solanum pennellii HOM05D008565 ORTHO05D011266 1.5e-09 67.0 148 36.5
Solyc04g057920.1 Solanum lycopersicum HOM05D008565 ORTHO05D018131 1.9e-09 66.6 95 42.1
PGSC0003DMG400041339 Solanum tuberosum HOM05D008565 ORTHO05D011266 1.9e-09 66.6 93 43.0
Sopen06g032370 Solanum pennellii HOM05D017346 ORTHO05D011266 2.5e-09 66.2 112 38.4
Solyc06g075770.1 Solanum lycopersicum HOM05D008565 ORTHO05D051169 4.3e-09 65.5 140 34.3
Solyc06g075950.2 Solanum lycopersicum HOM05D008565 ORTHO05D011266 4.3e-09 65.5 143 32.9
Solyc06g075820.1 Solanum lycopersicum HOM05D008565 ORTHO05D011266 7.3e-09 64.7 150 34.0
PGSC0003DMG400004157 Solanum tuberosum HOM05D008565 ORTHO05D011266 9.5e-09 64.3 100 34.0
Solyc04g057910.4 Solanum lycopersicum HOM05D008565 ORTHO05D018131 1.2e-08 63.9 139 37.4
Sopen04g025760 Solanum pennellii HOM05D008565 ORTHO05D018131 6.1e-08 61.6 107 36.4
PGSC0003DMG400035120 Solanum tuberosum HOM05D035698 ORTHO05D011266 1.0e-07 60.8 94 41.5
PGSC0003DMG400045349 Solanum tuberosum HOM05D008565 ORTHO05D011266 1.0e-07 60.8 153 32.0
PGSC0003DMG400046112 Solanum tuberosum HOM05D044745 ORTHO05D398714 1.0e-07 60.8 52 57.7
Actinidia37222 Actinidia chinensis HOM05D010595 ORTHO05D011290 2.3e-07 59.7 97 33.0
PGSC0003DMG400039884 Solanum tuberosum HOM05D008565 ORTHO05D018131 5.2e-07 58.5 107 36.4
Migut.B01546 Erythranthe guttata HOM05D014323 ORTHO05D011290 1.2e-06 57.4 99 30.3
Sopen04g025780 Solanum pennellii HOM05D008565 ORTHO05D018131 1.2e-06 57.4 68 45.6
PGSC0003DMG400036779 Solanum tuberosum HOM05D008565 ORTHO05D017126 1.2e-06 57.4 66 42.4
PGSC0003DMG400045398 Solanum tuberosum HOM05D008565 ORTHO05D017126 1.2e-06 57.4 121 33.9
Actinidia37221 Actinidia chinensis HOM05D010595 ORTHO05D011290 1.5e-06 57.0 126 26.2
Sopen06g032180 Solanum pennellii HOM05D008565 ORTHO05D011266 1.5e-06 57.0 148 33.1
Sopen06g032150 Solanum pennellii HOM05D008565 ORTHO05D021008 2.6e-06 56.2 129 31.8
PGSC0003DMG400004155 Solanum tuberosum HOM05D008565 ORTHO05D011266 2.6e-06 56.2 126 30.2
Solyc04g057900.1 Solanum lycopersicum HOM05D008565 ORTHO05D018131 7.5e-06 54.7 154 31.8
Solyc06g075860.3 Solanum lycopersicum HOM05D008565 ORTHO05D011266 9.8e-06 54.3 86 36.0


User provided reference genes

Program Settings