Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g075820.1 Solanum lycopersicum HOM05D008565 ORTHO05D011266 1.0e-93 346.7 168 100.0
Sopen06g032250 Solanum pennellii HOM05D008565 ORTHO05D011266 1.5e-84 316.2 166 92.8
PGSC0003DMG400043572 Solanum tuberosum HOM05D008565 ORTHO05D011266 6.7e-53 211.1 130 80.8
PGSC0003DMG400004157 Solanum tuberosum HOM05D008565 ORTHO05D011266 3.4e-20 102.4 107 49.5
Peaxi162Scf00679g00136 Petunia axillaris HOM05D008565 ORTHO05D011266 1.7e-19 100.1 131 39.7
PGSC0003DMG400004155 Solanum tuberosum HOM05D008565 ORTHO05D011266 2.8e-19 99.4 107 50.5
CAN.G394.27 Capsicum annuum HOM05D008565 ORTHO05D011266 1.8e-18 96.7 112 50.9
Solyc06g075860.3 Solanum lycopersicum HOM05D008565 ORTHO05D011266 6.6e-16 88.2 90 50.0
Nitab4.5_0009655g0020 Nicotiana tabacum HOM05D008565 ORTHO05D011266 2.5e-15 86.3 83 49.4
Nitab4.5_0001304g0010 Nicotiana tabacum HOM05D008565 ORTHO05D011266 2.3e-13 79.7 67 55.2
CAN.G394.29 Capsicum annuum HOM05D008565 ORTHO05D011266 8.9e-13 77.8 114 42.1
CAN.G394.39 Capsicum annuum HOM05D008565 ORTHO05D011266 1.2e-12 77.4 120 40.0
Solyc06g075770.1 Solanum lycopersicum HOM05D008565 ORTHO05D051169 1.5e-12 77.0 137 35.8
Sopen06g032190 Solanum pennellii HOM05D008565 ORTHO05D051169 3.4e-12 75.9 137 36.5
PGSC0003DMG400036779 Solanum tuberosum HOM05D008565 ORTHO05D017126 4.4e-12 75.5 106 34.9
PGSC0003DMG400041447 Solanum tuberosum HOM05D012723 ORTHO05D011266 4.4e-12 75.5 144 30.6
PGSC0003DMG400045398 Solanum tuberosum HOM05D008565 ORTHO05D017126 5.7e-12 75.1 159 32.7
PGSC0003DMG400045349 Solanum tuberosum HOM05D008565 ORTHO05D011266 1.3e-11 73.9 70 50.0
Solyc06g075950.2 Solanum lycopersicum HOM05D008565 ORTHO05D011266 2.2e-11 73.2 148 35.1
Solyc06g075920.2 Solanum lycopersicum HOM05D008565 ORTHO05D026158 2.9e-11 72.8 101 37.6
Solyc06g075720.3 Solanum lycopersicum HOM05D008565 ORTHO05D017126 4.9e-11 72.0 144 35.4
Solyc06g075910.1 Solanum lycopersicum HOM05D012723 ORTHO05D011266 4.9e-11 72.0 150 34.0
Solyc04g057920.1 Solanum lycopersicum HOM05D008565 ORTHO05D018131 6.4e-11 71.6 99 36.4
Sopen04g025770 Solanum pennellii HOM05D008565 ORTHO05D018131 1.1e-10 70.9 143 35.0
Sopen06g032120 Solanum pennellii HOM05D008565 ORTHO05D017126 1.1e-10 70.9 136 35.3
PGSC0003DMG400039447 Solanum tuberosum HOM05D008565 ORTHO05D021008 5.4e-10 68.6 99 40.4
Solyc04g057910.4 Solanum lycopersicum HOM05D008565 ORTHO05D018131 7.0e-10 68.2 143 34.3
Sopen06g032320 Solanum pennellii HOM05D012723 ORTHO05D011266 7.0e-10 68.2 94 39.4
PGSC0003DMG400044843 Solanum tuberosum HOM05D008565 ORTHO05D017126 1.2e-09 67.4 92 40.2
Actinidia37222 Actinidia chinensis HOM05D010595 ORTHO05D011290 1.6e-09 67.0 97 29.9
CAN.G394.36 Capsicum annuum HOM05D012723 ORTHO05D011266 2.7e-09 66.2 148 31.8
Solyc04g057900.1 Solanum lycopersicum HOM05D008565 ORTHO05D018131 2.7e-09 66.2 98 36.7
CiPaw.14G071600 Carya illinoinensis HOM05D010595 ORTHO05D011290 3.5e-09 65.9 96 31.2
Sopen04g025760 Solanum pennellii HOM05D008565 ORTHO05D018131 3.5e-09 65.9 94 38.3
Sopen06g032270 Solanum pennellii HOM05D017346 ORTHO05D024760 3.5e-09 65.9 101 35.6
Solyc06g075430.3 Solanum lycopersicum HOM05D039704 ORTHO05D024760 7.8e-09 64.7 139 30.9
Sopen06g032180 Solanum pennellii HOM05D008565 ORTHO05D011266 7.8e-09 64.7 156 31.4
Solyc06g075840.1 Solanum lycopersicum HOM05D017346 ORTHO05D024760 1.3e-08 63.9 101 34.7
Sopen06g032340 Solanum pennellii HOM05D012723 ORTHO05D011266 1.3e-08 63.9 114 29.8
PGSC0003DMG400043558 Solanum tuberosum HOM05D012723 ORTHO05D011266 1.3e-08 63.9 146 34.2
PGSC0003DMG400041091 Solanum tuberosum HOM05D012723 ORTHO05D011266 1.7e-08 63.5 152 32.2
Sopen06g032110 Solanum pennellii HOM05D008565 ORTHO05D017126 2.3e-08 63.2 143 29.4
PGSC0003DMG400041339 Solanum tuberosum HOM05D008565 ORTHO05D011266 2.3e-08 63.2 115 33.0
Actinidia26304 Actinidia chinensis HOM05D010595 ORTHO05D011290 3.9e-08 62.4 112 27.7
Sopen04g025780 Solanum pennellii HOM05D008565 ORTHO05D018131 3.9e-08 62.4 74 36.5
PGSC0003DMG400045401 Solanum tuberosum HOM05D008565 ORTHO05D017126 3.9e-08 62.4 120 33.3
Actinidia37227 Actinidia chinensis HOM05D010595 ORTHO05D011290 5.0e-08 62.0 103 33.0
CiPaw.14G071500 Carya illinoinensis HOM05D010595 ORTHO05D011290 1.1e-07 60.8 103 31.1
CAN.G394.42 Capsicum annuum HOM05D017346 ORTHO05D024760 1.9e-07 60.1 101 33.7
CAN.G394.31 Capsicum annuum HOM05D008565 ORTHO05D011266 2.5e-07 59.7 111 36.9
Solyc06g075880.1 Solanum lycopersicum HOM05D008565 ORTHO05D021008 3.3e-07 59.3 144 34.0
Peaxi162Scf00679g00129 Petunia axillaris HOM05D044200 ORTHO05D011266 4.3e-07 58.9 69 47.8
Hund09174 Selenicereus undatus HOM05D000553 ORTHO05D000460 5.6e-07 58.5 119 27.7
PGSC0003DMG400039884 Solanum tuberosum HOM05D008565 ORTHO05D018131 5.6e-07 58.5 87 35.6
CDE02G4112 Ceratophyllum demersum HOM05D000553 ORTHO05D000460 1.2e-06 57.4 102 32.4
PGR031G1061 Punica granatum HOM05D000553 ORTHO05D000460 1.2e-06 57.4 118 30.5
Actinidia37231 Actinidia chinensis HOM05D010595 ORTHO05D011290 1.6e-06 57.0 115 33.0
MD04G1151100 Malus domestica HOM05D000553 ORTHO05D000460 1.6e-06 57.0 122 32.0
Sopen06g032290 Solanum pennellii HOM05D008565 ORTHO05D021008 1.6e-06 57.0 100 38.0
Sp3g07410 Schrenkiella parvula HOM05D000553 ORTHO05D000460 2.8e-06 56.2 112 33.0
Actinidia37228 Actinidia chinensis HOM05D010595 ORTHO05D011290 3.6e-06 55.8 113 29.2
CDE04G0477 Ceratophyllum demersum HOM05D000553 ORTHO05D000460 3.6e-06 55.8 102 32.4
Sopen06g031830 Solanum pennellii HOM05D000012 ORTHO05D001652 3.6e-06 55.8 68 41.2
Actinidia07057 Actinidia chinensis HOM05D010595 ORTHO05D011290 6.2e-06 55.1 98 31.6
AT3G08990 Arabidopsis thaliana HOM05D000553 ORTHO05D000460 8.0e-06 54.7 120 30.8


User provided reference genes

Program Settings