Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g075770.1 Solanum lycopersicum HOM05D008565 ORTHO05D051169 1.4e-78 297.4 332 100.0
Sopen06g032190 Solanum pennellii HOM05D008565 ORTHO05D051169 8.8e-73 278.1 144 91.0
PGSC0003DMG400041091 Solanum tuberosum HOM05D012723 ORTHO05D011266 5.8e-16 89.4 123 39.0
Solyc04g057920.1 Solanum lycopersicum HOM05D008565 ORTHO05D018131 6.4e-15 85.9 111 42.3
PGSC0003DMG400036779 Solanum tuberosum HOM05D008565 ORTHO05D017126 3.2e-14 83.6 162 42.0
Solyc06g075920.2 Solanum lycopersicum HOM05D008565 ORTHO05D026158 5.4e-14 82.8 114 36.8
Solyc06g075720.3 Solanum lycopersicum HOM05D008565 ORTHO05D017126 7.9e-13 79.0 163 36.8
PGSC0003DMG400041447 Solanum tuberosum HOM05D012723 ORTHO05D011266 7.9e-13 79.0 143 37.1
Solyc06g075840.1 Solanum lycopersicum HOM05D017346 ORTHO05D024760 2.3e-12 77.4 114 38.6
Solyc06g075820.1 Solanum lycopersicum HOM05D008565 ORTHO05D011266 3.0e-12 77.0 137 35.8
Sopen06g032270 Solanum pennellii HOM05D017346 ORTHO05D024760 3.9e-12 76.6 114 39.5
PGSC0003DMG400044843 Solanum tuberosum HOM05D008565 ORTHO05D017126 6.7e-12 75.9 81 44.4
Peaxi162Scf00679g00136 Petunia axillaris HOM05D008565 ORTHO05D011266 8.7e-12 75.5 87 48.3
Solyc06g075950.2 Solanum lycopersicum HOM05D008565 ORTHO05D011266 1.1e-11 75.1 88 44.3
Sopen06g032180 Solanum pennellii HOM05D008565 ORTHO05D011266 1.9e-11 74.3 149 35.6
Sopen04g025780 Solanum pennellii HOM05D008565 ORTHO05D018131 2.5e-11 73.9 86 46.5
Sopen06g032250 Solanum pennellii HOM05D008565 ORTHO05D011266 9.6e-11 72.0 89 41.6
Nitab4.5_0001304g0010 Nicotiana tabacum HOM05D008565 ORTHO05D011266 1.3e-10 71.6 92 39.1
Solyc06g075910.1 Solanum lycopersicum HOM05D012723 ORTHO05D011266 3.7e-10 70.1 140 34.3
Sopen06g032120 Solanum pennellii HOM05D008565 ORTHO05D017126 3.7e-10 70.1 129 35.7
Solyc04g057910.4 Solanum lycopersicum HOM05D008565 ORTHO05D018131 4.8e-10 69.7 121 37.2
PGSC0003DMG400039447 Solanum tuberosum HOM05D008565 ORTHO05D021008 4.8e-10 69.7 118 39.0
Sopen04g025770 Solanum pennellii HOM05D008565 ORTHO05D018131 6.2e-10 69.3 121 37.2
PGSC0003DMG400041339 Solanum tuberosum HOM05D008565 ORTHO05D011266 1.8e-09 67.8 90 41.1
Nitab4.5_0009655g0020 Nicotiana tabacum HOM05D008565 ORTHO05D011266 4.0e-09 66.6 83 43.4
PGSC0003DMG400039884 Solanum tuberosum HOM05D008565 ORTHO05D018131 1.5e-08 64.7 85 44.7
Migut.D02120 Erythranthe guttata HOM05D000553 ORTHO05D011290 5.8e-08 62.8 98 36.7
PGSC0003DMG400045398 Solanum tuberosum HOM05D008565 ORTHO05D017126 7.6e-08 62.4 148 34.5
Solyc06g075880.1 Solanum lycopersicum HOM05D008565 ORTHO05D021008 9.9e-08 62.0 124 37.1
PGSC0003DMG400004157 Solanum tuberosum HOM05D008565 ORTHO05D011266 9.9e-08 62.0 80 40.0
PGSC0003DMG400034401 Solanum tuberosum HOM05D008565 ORTHO05D018131 1.3e-07 61.6 63 46.0
PGSC0003DMG400045401 Solanum tuberosum HOM05D008565 ORTHO05D017126 1.7e-07 61.2 103 35.0
CAN.G394.39 Capsicum annuum HOM05D008565 ORTHO05D011266 2.2e-07 60.8 113 32.7
Solyc03g115970.2 Solanum lycopersicum HOM05D008565 ORTHO05D021008 2.2e-07 60.8 118 35.6
Sopen06g032110 Solanum pennellii HOM05D008565 ORTHO05D017126 2.2e-07 60.8 126 29.4
Sopen06g032320 Solanum pennellii HOM05D012723 ORTHO05D011266 2.2e-07 60.8 108 34.3
CAN.G394.29 Capsicum annuum HOM05D008565 ORTHO05D011266 2.9e-07 60.5 89 38.2
Solyc06g075870.1 Solanum lycopersicum HOM05D008565 ORTHO05D021008 4.9e-07 59.7 95 40.0
Sopen06g032290 Solanum pennellii HOM05D008565 ORTHO05D021008 4.9e-07 59.7 95 40.0
Solyc06g075860.3 Solanum lycopersicum HOM05D008565 ORTHO05D011266 8.4e-07 58.9 82 39.0
PGSC0003DMG400004155 Solanum tuberosum HOM05D008565 ORTHO05D011266 8.4e-07 58.9 73 42.5
CAN.G394.42 Capsicum annuum HOM05D017346 ORTHO05D024760 1.9e-06 57.8 135 31.1
CiPaw.14G071500 Carya illinoinensis HOM05D010595 ORTHO05D011290 2.5e-06 57.4 87 32.2
PGSC0003DMG400043558 Solanum tuberosum HOM05D012723 ORTHO05D011266 2.5e-06 57.4 137 35.0
Actinidia37221 Actinidia chinensis HOM05D010595 ORTHO05D011290 3.2e-06 57.0 88 34.1
Migut.D02126 Erythranthe guttata HOM05D046984 ORTHO05D011290 3.2e-06 57.0 99 32.3
Sopen06g032160 Solanum pennellii HOM05D012723 ORTHO05D011266 3.2e-06 57.0 139 34.5
Sopen06g032340 Solanum pennellii HOM05D012723 ORTHO05D011266 3.2e-06 57.0 115 33.0
CiPaw.14G071600 Carya illinoinensis HOM05D010595 ORTHO05D011290 4.2e-06 56.6 88 35.2
Sopen06g032150 Solanum pennellii HOM05D008565 ORTHO05D021008 4.2e-06 56.6 103 35.9
Sopen03g034960 Solanum pennellii HOM05D008565 ORTHO05D021008 5.5e-06 56.2 117 34.2
Sopen04g025760 Solanum pennellii HOM05D008565 ORTHO05D018131 7.1e-06 55.8 113 33.6
PGSC0003DMG400045349 Solanum tuberosum HOM05D008565 ORTHO05D011266 9.3e-06 55.5 76 38.2


User provided reference genes

Program Settings