Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g074380.3 Solanum lycopersicum HOM05D006704 ORTHO05D008635 4.5e-203 711.1 366 100.0
Sopen06g030840 Solanum pennellii HOM05D006704 ORTHO05D008635 4.7e-200 701.0 369 98.6
PGSC0003DMG400007144 Solanum tuberosum HOM05D006704 ORTHO05D008635 5.3e-196 687.6 366 92.1
CAN.G919.21 Capsicum annuum HOM05D006704 ORTHO05D008635 2.9e-186 655.2 366 91.3
Nitab4.5_0002002g0020 Nicotiana tabacum HOM05D006704 ORTHO05D008635 2.7e-179 632.1 389 80.7
Nitab4.5_0015718g0010 Nicotiana tabacum HOM05D006704 ORTHO05D008635 9.4e-177 623.6 398 78.9
Nitab4.5_0002002g0030 Nicotiana tabacum HOM05D006704 ORTHO05D008635 8.8e-175 617.1 373 82.0
Peaxi162Scf00091g00118 Petunia axillaris HOM05D006704 ORTHO05D008635 4.1e-164 581.6 317 88.0
Dinv29464 Davidia involucrata HOM05D006704 ORTHO05D008635 2.7e-147 525.8 399 66.4
SalBow6G4963 Salvia bowleyana HOM05D006704 ORTHO05D008635 3.0e-146 522.3 394 66.8
Lsat_1_v5_gn_6_40481 Lactuca sativa HOM05D006704 ORTHO05D008635 3.9e-146 521.9 376 68.9
Hma1.2p1_0305F.1_g119670 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 1.6e-144 516.5 318 76.4
Cc01_g09380 Coffea canephora HOM05D006704 ORTHO05D008635 2.1e-144 516.2 334 73.4
vmacro03306 Vaccinium macrocarpon HOM05D006704 ORTHO05D008635 2.1e-144 516.2 339 72.6
Rhsim13G0110100 Rhododendron simsii HOM05D006704 ORTHO05D008635 4.7e-144 515.0 338 72.5
SGA_v2.0_scaffold22G09877 Striga asiatica HOM05D006704 ORTHO05D008635 2.3e-143 512.7 383 66.6
HanXRQChr12g0364591 Helianthus annuus HOM05D006704 ORTHO05D008635 5.2e-143 511.5 381 68.2
CSS0007169 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 6.8e-143 511.1 328 74.7
CSS0018673 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 6.8e-143 511.1 328 74.7
Migut.D02353 Erythranthe guttata HOM05D006704 ORTHO05D008635 8.9e-143 510.8 390 67.7
GSVIVG01036154001 Vitis vinifera HOM05D006704 ORTHO05D008635 3.4e-142 508.8 308 77.9
AUR62009778 Chenopodium quinoa HOM05D006704 ORTHO05D008635 9.9e-142 507.3 385 66.2
ECA233G1041 Erigeron canadensis HOM05D006704 ORTHO05D008635 3.7e-141 505.4 372 68.3
TAR633G0569 Trochodendron aralioides HOM05D006704 ORTHO05D008635 8.4e-141 504.2 400 67.2
TWI31G0547 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 4.1e-140 501.9 326 72.4
Manes.11G160500 Manihot esculenta HOM05D006704 ORTHO05D008635 2.1e-139 499.6 325 71.7
MSTRG.18751 Avicennia marina HOM05D006704 ORTHO05D008635 3.5e-139 498.8 393 63.6
COL.COLO4_19912 Corchorus olitorius HOM05D006704 ORTHO05D008635 6.0e-139 498.0 389 64.3
Glyma.11G184500 Glycine max HOM05D006704 ORTHO05D008635 6.0e-139 498.0 326 71.2
AUR62039223 Chenopodium quinoa HOM05D006704 ORTHO05D008635 7.8e-139 497.7 385 67.8
QL01p012560 Quercus lobata HOM05D006704 ORTHO05D008635 7.8e-139 497.7 323 71.2
Potri.004G184400 Populus trichocarpa HOM05D006704 ORTHO05D008635 1.3e-138 496.9 327 71.9
DCAR_006157 Daucus carota HOM05D006704 ORTHO05D008635 5.1e-138 495.0 389 64.5
PGR119G0959 Punica granatum HOM05D006704 ORTHO05D008635 6.6e-138 494.6 388 65.5
Lj3g0010910 Lotus japonicus HOM05D006704 ORTHO05D008635 8.6e-138 494.2 387 64.9
RcHm_v2.0_Chr5g0044201 Rosa chinensis HOM05D006704 ORTHO05D008635 1.5e-137 493.4 395 61.8
FvH4_3g24630 Fragaria vesca HOM05D006704 ORTHO05D008635 3.3e-137 492.3 402 65.9
Glyma.12G087800 Glycine max HOM05D006704 ORTHO05D008635 3.3e-137 492.3 326 70.2
Ah.08g215840 Amaranthus hybridus HOM05D006704 ORTHO05D008635 4.3e-137 491.9 327 70.6
VMungo1127G0699 Vigna mungo HOM05D006704 ORTHO05D008635 5.6e-137 491.5 325 70.8
Medtr4g053410 Medicago truncatula HOM05D006704 ORTHO05D008635 1.6e-136 490.0 389 62.7
EL10Ac7g15806 Beta vulgaris HOM05D006704 ORTHO05D008635 2.8e-136 489.2 398 64.8
Ca_19394_v3 Cicer arietinum L. HOM05D006704 ORTHO05D008635 2.8e-136 489.2 327 70.6
MD03G1142000 Malus domestica HOM05D006704 ORTHO05D008635 2.8e-136 489.2 392 64.8
Aqoxy2G01240 Aquilegia oxysepala HOM05D006704 ORTHO05D008635 3.6e-136 488.8 324 69.1
Psat7g188440 Pisum sativum HOM05D006704 ORTHO05D008635 4.7e-136 488.4 390 65.4
Thecc.09G286000 Theobroma cacao HOM05D006704 ORTHO05D008635 4.7e-136 488.4 388 66.2
Ciclev10028571m.g Citrus clementina HOM05D006704 ORTHO05D008635 8.1e-136 487.6 326 70.2
TPR.G17210 Trifolium pratense HOM05D006704 ORTHO05D008635 8.1e-136 487.6 394 66.8
Hund20877 Selenicereus undatus HOM05D006704 ORTHO05D008635 2.4e-135 486.1 390 66.2
Phvul.011G092800 Phaseolus vulgaris HOM05D006704 ORTHO05D008635 3.1e-135 485.7 326 70.6
arahy.Tifrunner.gnm1.ann1.GMPU9C Arachis hypogaea HOM05D006704 ORTHO05D008635 4.0e-135 485.3 325 71.1
Duzib170G0143 Durio zibethinus HOM05D006704 ORTHO05D008635 4.0e-135 485.3 395 65.1
arahy.Tifrunner.gnm1.ann1.JHI8LQ Arachis hypogaea HOM05D006704 ORTHO05D008635 6.8e-135 484.6 325 71.1
CANSAT54G0988 Cannabis sativa HOM05D006704 ORTHO05D008635 6.8e-135 484.6 386 63.7
Gorai.009G086600 Gossypium raimondii HOM05D006704 ORTHO05D008635 1.2e-134 483.8 325 69.5
Sabra04G0124100 Salix brachista HOM05D006704 ORTHO05D008635 1.2e-134 483.8 327 69.7
Sed0027356 Sechium edule HOM05D006704 ORTHO05D008635 1.5e-134 483.4 330 70.3
AL4G22810 Arabidopsis lyrata HOM05D006704 ORTHO05D008635 2.0e-134 483.0 317 71.0
Lalb_Chr03g0028021 Lupinus albus HOM05D006704 ORTHO05D008635 3.4e-134 482.3 323 70.0
BcaC02g08239 Brassica carinata HOM05D006704 ORTHO05D008635 4.4e-134 481.9 309 70.9
C04p56860 Brassica napus HOM05D006704 ORTHO05D008635 4.4e-134 481.9 309 70.9
Gohir.A05G081700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 4.4e-134 481.9 323 70.0
AT2G27590 Arabidopsis thaliana HOM05D006704 ORTHO05D008635 5.8e-134 481.5 317 70.7
BcaB06g28156 Brassica carinata HOM05D006704 ORTHO05D008635 7.6e-134 481.1 310 70.3
MELO3C004818.2 Cucumis melo HOM05D006704 ORTHO05D008635 7.6e-134 481.1 329 69.9
Carub.0004s0825 Capsella rubella HOM05D006704 ORTHO05D008635 1.3e-133 480.3 311 71.7
Eucgr.I00893 Eucalyptus grandis HOM05D006704 ORTHO05D008635 2.9e-133 479.2 393 62.3
BolC4t27219H Brassica oleracea HOM05D006704 ORTHO05D008635 3.8e-133 478.8 311 71.7
Gohir.D05G084700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 3.8e-133 478.8 325 68.9
Cfa010042 Carpinus fangiana HOM05D006704 ORTHO05D008635 4.9e-133 478.4 327 69.1
ClCG01G012900 Citrullus lanatus HOM05D006704 ORTHO05D008635 4.9e-133 478.4 329 69.9
Nn6g34957 Nelumbo nucifera HOM05D006704 ORTHO05D008635 8.4e-133 477.6 390 64.1
CsaV3_1G014420 Cucumis sativus L. HOM05D006704 ORTHO05D008635 1.1e-132 477.2 389 64.3
Atru.chr3.3296 Acer truncatum HOM05D006704 ORTHO05D008635 4.2e-132 475.3 393 64.1
Sp4g10410 Schrenkiella parvula HOM05D006704 ORTHO05D008635 4.2e-132 475.3 374 64.7
Aa31LG5G8320 Aethionema arabicum HOM05D006704 ORTHO05D008635 5.4e-132 474.9 315 70.5
CARHR121470 Cardamine hirsuta HOM05D006704 ORTHO05D008635 9.3e-132 474.2 378 65.1
unitig_37.g12893 Utricularia gibba HOM05D006704 ORTHO05D008635 9.3e-132 474.2 381 62.7
A04p21040 Brassica napus HOM05D006704 ORTHO05D008635 1.6e-131 473.4 311 70.7
BraA04t17672Z Brassica rapa HOM05D006704 ORTHO05D008635 1.6e-131 473.4 311 70.7
Thhalv10016700m.g Eutrema salsugineum HOM05D006704 ORTHO05D008635 6.0e-131 471.5 375 66.4
FAN11G2081 Fragaria x ananassa HOM05D006704 ORTHO05D008635 6.0e-131 471.5 311 71.4
FAN21G3586 Fragaria x ananassa HOM05D006704 ORTHO05D008635 1.5e-129 466.8 309 71.5
THA.LOC104800539 Tarenaya hassleriana HOM05D006704 ORTHO05D008635 7.3e-129 464.5 396 62.1
CDE06G2417 Ceratophyllum demersum HOM05D006704 ORTHO05D008635 2.4e-127 459.5 377 58.9
PSO339G4200 Papaver somniferum HOM05D006704 ORTHO05D008635 3.1e-127 459.1 321 67.0
MBI17_g08127_MAGBIO Magnolia biondii HOM05D006704 ORTHO05D008635 6.9e-127 458.0 331 65.0
Lj2A980T13 Lonicera japonica HOM05D006704 ORTHO05D008635 9.0e-127 457.6 312 69.6
PSO384G3226 Papaver somniferum HOM05D006704 ORTHO05D008635 4.4e-126 455.3 321 65.7
CiPaw.13G137600 Carya illinoinensis HOM05D006704 ORTHO05D008635 6.4e-125 451.4 378 62.7
Sc12g0004410 Simmondsia chinensis HOM05D006704 ORTHO05D008635 3.9e-122 442.2 292 69.5
Os01g0858700 Oryza sativa ssp. japonica HOM05D006704 ORTHO05D008635 6.2e-120 434.9 321 63.2
Haze_23402 Corylus avellana HOM05D006704 ORTHO05D008635 2.0e-118 429.9 438 51.6
Zm00001eb147310 Zea mays HOM05D006704 ORTHO05D008635 4.9e-117 425.2 397 53.7
HPP92_000003 Vanilla planifolia HOM05D006704 ORTHO05D008635 8.4e-117 424.5 316 65.5
Prupe.6G127300 Prunus persica HOM05D006704 ORTHO05D008635 6.7e-114 414.8 285 69.5
ATR0820G138 Amborella trichopoda HOM05D006704 ORTHO05D008635 6.9e-111 404.8 300 64.3
SEGI_32150 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 3.0e-106 389.4 391 51.9
Actinidia07237 Actinidia chinensis HOM05D006704 ORTHO05D008635 2.9e-101 372.9 328 57.3
Cpa.g.sc32.105 Carica papaya HOM05D006704 ORTHO05D008635 5.0e-101 372.1 326 58.9
Mapoly0047s0027 Marchantia polymorpha HOM05D006704 ORTHO05D008635 2.8e-96 356.3 323 52.3
FAN16G1713 Fragaria x ananassa HOM05D006704 ORTHO05D008635 2.6e-94 349.7 248 68.1
AagrBONN_evm.TU.Sc2ySwM_228.5549 Anthoceros agrestis HOM05D006704 ORTHO05D008635 7.2e-92 341.7 321 51.1
SMO079G0003 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 2.1e-91 340.1 299 53.8
SMO200G0095 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 3.6e-91 339.3 299 53.5
Hma1.2p1_0305F.1_g119660 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 1.2e-86 324.3 230 68.3
Oeu031485.1 Olea europaea HOM05D006704 ORTHO05D008635 3.1e-42 176.8 382 35.3
TWI79G0085 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 1.6e-38 164.5 99 71.7
MD03G1142200 Malus domestica HOM05D006704 ORTHO05D008635 8.9e-34 148.7 92 73.9
VMungo0464G0466 Vigna mungo HOM05D006704 ORTHO05D000044 8.9e-26 122.1 123 52.0
Migut.D01870 Erythranthe guttata HOM05D006704 ORTHO05D008635 9.9e-25 118.6 255 32.2
Actinidia24205 Actinidia chinensis HOM05D006704 ORTHO05D008635 4.1e-23 113.2 65 73.8
Cpa.g.sc32.104 Carica papaya HOM05D006704 ORTHO05D008635 4.6e-22 109.8 77 63.6
Cfa010043 Carpinus fangiana HOM05D006704 ORTHO05D008635 2.6e-17 94.0 53 79.2
SEGI_14445 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 8.4e-16 89.0 111 46.8
QL02p006829 Quercus lobata HOM05D006704 ORTHO05D004198 4.3e-12 76.6 53 67.9
MD11G1162700 Malus domestica HOM05D006704 ORTHO05D008635 5.3e-10 69.7 128 34.4


User provided reference genes

Program Settings