Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g073510.3 Solanum lycopersicum HOM05D004259 ORTHO05D005014 6.2e-205 717.2 364 100.0
Sopen06g029870 Solanum pennellii HOM05D004259 ORTHO05D005014 1.8e-204 715.7 364 99.5
PGSC0003DMG400027003 Solanum tuberosum HOM05D004259 ORTHO05D005014 5.8e-203 710.7 364 98.4
CAN.G65.190 Capsicum annuum HOM05D004259 ORTHO05D005014 9.1e-188 660.2 372 90.3
Peaxi162Scf00162g00029 Petunia axillaris HOM05D004259 ORTHO05D005014 7.4e-182 640.6 371 86.5
Peaxi162Scf00929g00211 Petunia axillaris HOM05D004259 ORTHO05D005014 7.4e-182 640.6 371 87.3
Nitab4.5_0002664g0020 Nicotiana tabacum HOM05D004259 ORTHO05D005014 3.6e-176 621.7 399 80.7
Nitab4.5_0002045g0130 Nicotiana tabacum HOM05D004259 ORTHO05D005014 2.2e-170 602.4 366 84.7
Nitab4.5_0000111g0020 Nicotiana tabacum HOM05D004259 ORTHO05D005014 3.8e-170 601.7 386 82.4
Peaxi162Scf00003g02311 Petunia axillaris HOM05D004259 ORTHO05D005014 6.7e-167 590.9 400 78.0
Migut.N02703 Erythranthe guttata HOM05D004259 ORTHO05D005014 2.8e-157 558.9 362 74.9
CSS0003524 Camellia sinensis var. sinensis HOM05D004259 ORTHO05D005014 4.8e-157 558.1 362 75.7
Oeu018211.1 Olea europaea HOM05D004259 ORTHO05D005014 2.0e-155 552.7 374 71.9
Duzib128G0657 Durio zibethinus HOM05D004259 ORTHO05D005014 5.9e-155 551.2 362 73.8
MSTRG.24327 Avicennia marina HOM05D004259 ORTHO05D005014 7.7e-155 550.8 362 73.2
Atru.chr8.1940 Acer truncatum HOM05D004259 ORTHO05D005014 1.3e-154 550.1 362 73.8
Ciclev10012027m.g Citrus clementina HOM05D004259 ORTHO05D005014 1.1e-153 547.0 362 72.9
Nitab4.5_0004918g0050 Nicotiana tabacum HOM05D004259 ORTHO05D005014 9.5e-153 543.9 356 78.1
Cfa018528 Carpinus fangiana HOM05D004259 ORTHO05D005014 1.2e-152 543.5 365 74.5
Sed0023883 Sechium edule HOM05D004259 ORTHO05D005014 1.4e-151 540.0 362 71.8
Gohir.D11G345100 Gossypium hirsutum HOM05D004259 ORTHO05D005014 2.3e-151 539.3 362 71.8
Gorai.007G375500 Gossypium raimondii HOM05D004259 ORTHO05D005014 3.0e-151 538.9 362 71.8
Manes.08G078200 Manihot esculenta HOM05D004259 ORTHO05D005014 2.6e-150 535.8 362 70.4
CANSAT01G2810 Cannabis sativa HOM05D004259 ORTHO05D005014 9.8e-150 533.9 363 71.3
Thecc.05G042500 Theobroma cacao HOM05D004259 ORTHO05D005014 4.9e-149 531.6 362 71.8
ClCG08G015740 Citrullus lanatus HOM05D004259 ORTHO05D005014 6.3e-149 531.2 372 70.2
Potri.003G094800 Populus trichocarpa HOM05D004259 ORTHO05D005014 8.3e-149 530.8 362 71.5
MELO3C010882.2 Cucumis melo HOM05D004259 ORTHO05D005014 1.1e-148 530.4 362 70.4
Gohir.A11G326200 Gossypium hirsutum HOM05D004259 ORTHO05D005014 2.4e-148 529.3 362 70.4
CiPaw.15G061500 Carya illinoinensis HOM05D004259 ORTHO05D005014 3.1e-148 528.9 356 73.3
PSO675G0522 Papaver somniferum HOM05D004259 ORTHO05D005014 5.4e-148 528.1 363 70.2
QL02p005360 Quercus lobata HOM05D004259 ORTHO05D005014 7.0e-148 527.7 418 65.1
CsaV3_2G028020 Cucumis sativus L. HOM05D004259 ORTHO05D005014 1.2e-147 526.9 362 70.7
MD08G1103300 Malus domestica HOM05D004259 ORTHO05D005014 1.6e-147 526.6 362 72.1
Lj3C736T6 Lonicera japonica HOM05D004259 ORTHO05D005014 2.0e-147 526.2 362 72.7
HanXRQChr04g0103531 Helianthus annuus HOM05D004259 ORTHO05D005014 5.9e-147 524.6 362 71.3
PGR031G2227 Punica granatum HOM05D004259 ORTHO05D005014 5.9e-147 524.6 362 69.1
Nn1g05830 Nelumbo nucifera HOM05D004259 ORTHO05D005014 1.3e-146 523.5 362 69.3
unitig_26.g10027 Utricularia gibba HOM05D004259 ORTHO05D005014 1.3e-146 523.5 362 69.3
PSO339G6255 Papaver somniferum HOM05D004259 ORTHO05D005014 1.7e-146 523.1 363 70.0
EL10Ac3g06655 Beta vulgaris HOM05D004259 ORTHO05D005014 8.6e-146 520.8 362 69.9
Lsat_1_v5_gn_1_20280 Lactuca sativa HOM05D004259 ORTHO05D005014 8.6e-146 520.8 362 71.0
TAR376G0692 Trochodendron aralioides HOM05D004259 ORTHO05D005014 1.1e-145 520.4 356 70.8
Cpa.g.sc973.4 Carica papaya HOM05D004259 ORTHO05D005014 3.3e-145 518.8 362 69.3
PSO541G1765 Papaver somniferum HOM05D004259 ORTHO05D005014 7.3e-145 517.7 363 68.9
THA.LOC104806568 Tarenaya hassleriana HOM05D004259 ORTHO05D005014 7.3e-145 517.7 359 69.9
AUR62022427 Chenopodium quinoa HOM05D004259 ORTHO05D005014 1.2e-144 516.9 362 70.4
A05p08400 Brassica napus HOM05D004259 ORTHO05D005014 1.6e-144 516.5 361 69.3
BraA05t19805Z Brassica rapa HOM05D004259 ORTHO05D005014 1.6e-144 516.5 361 69.3
THA.LOC104809222 Tarenaya hassleriana HOM05D004259 ORTHO05D005014 2.8e-144 515.8 363 70.2
AUR62039303 Chenopodium quinoa HOM05D004259 ORTHO05D005014 1.0e-143 513.8 362 69.9
BcaB02g09273 Brassica carinata HOM05D004259 ORTHO05D005014 1.4e-143 513.5 361 68.7
Glyma.14G082100 Glycine max HOM05D004259 ORTHO05D005014 1.4e-143 513.5 359 69.4
SalBow2G1152 Salvia bowleyana HOM05D004259 ORTHO05D005014 1.5e-142 510.0 387 65.9
CARHR132030 Cardamine hirsuta HOM05D004259 ORTHO05D005014 2.6e-142 509.2 361 68.4
BcaC02g11869 Brassica carinata HOM05D004259 ORTHO05D005014 3.4e-142 508.8 361 68.4
Aqoxy7G01016 Aquilegia oxysepala HOM05D004259 ORTHO05D005014 5.8e-142 508.1 363 68.9
Carub.0004s1948 Capsella rubella HOM05D004259 ORTHO05D005014 5.8e-142 508.1 361 68.1
Ca_01811_v3 Cicer arietinum L. HOM05D004259 ORTHO05D005014 5.8e-142 508.1 353 72.0
Ca_29610_v3 Cicer arietinum L. HOM05D004259 ORTHO05D005014 5.8e-142 508.1 353 72.0
Sp4g19910 Schrenkiella parvula HOM05D004259 ORTHO05D005014 5.8e-142 508.1 361 68.7
Lj5g0003666 Lotus japonicus HOM05D004259 ORTHO05D005014 7.5e-142 507.7 358 69.0
SalBow2G2463 Salvia bowleyana HOM05D004259 ORTHO05D005014 7.5e-142 507.7 387 65.6
Thhalv10016846m.g Eutrema salsugineum HOM05D004259 ORTHO05D005014 9.8e-142 507.3 361 68.4
BolC4t22638H Brassica oleracea HOM05D004259 ORTHO05D005014 1.3e-141 506.9 361 68.1
Dinv39327 Davidia involucrata HOM05D004259 ORTHO05D005014 1.7e-141 506.5 319 76.5
SalBow2G2012 Salvia bowleyana HOM05D004259 ORTHO05D005014 3.7e-141 505.4 387 65.4
FvH4_2g34610 Fragaria vesca HOM05D004259 ORTHO05D005014 6.4e-141 504.6 362 66.6
Phvul.001G021100 Phaseolus vulgaris HOM05D004259 ORTHO05D005014 6.4e-141 504.6 359 69.6
C04p10400 Brassica napus HOM05D004259 ORTHO05D005014 8.3e-141 504.2 361 67.9
AL4G34050 Arabidopsis lyrata HOM05D004259 ORTHO05D005014 1.1e-140 503.8 361 68.4
Lalb_Chr19g0129351 Lupinus albus HOM05D004259 ORTHO05D005014 1.9e-140 503.1 362 68.8
RcHm_v2.0_Chr6g0307691 Rosa chinensis HOM05D004259 ORTHO05D005014 5.4e-140 501.5 362 66.3
Eucgr.F00239 Eucalyptus grandis HOM05D004259 ORTHO05D005014 9.2e-140 500.7 362 67.1
VMungo0647G0522 Vigna mungo HOM05D004259 ORTHO05D005014 9.2e-140 500.7 359 69.1
FAN15G2861 Fragaria x ananassa HOM05D001625 ORTHO05D005014 1.2e-139 500.4 362 66.3
FAN20G1942 Fragaria x ananassa HOM05D004259 ORTHO05D005014 2.0e-139 499.6 362 66.0
Haze_17552 Corylus avellana HOM05D004259 ORTHO05D005014 3.5e-139 498.8 367 70.0
Psat6g012600 Pisum sativum HOM05D004259 ORTHO05D005014 6.6e-138 494.6 350 70.9
MBI02_g17334_MAGBIO Magnolia biondii HOM05D004259 ORTHO05D005014 8.6e-138 494.2 394 64.0
TPR.G17553 Trifolium pratense HOM05D004259 ORTHO05D005014 8.6e-138 494.2 350 70.0
Medtr1g019770 Medicago truncatula HOM05D004259 ORTHO05D005014 4.3e-137 491.9 350 70.0
AT2G37560 Arabidopsis thaliana HOM05D004259 ORTHO05D005014 1.6e-136 490.0 361 65.7
Sabra03G0064000 Salix brachista HOM05D004259 ORTHO05D005014 8.0e-136 487.6 360 67.5
SGA_v2.0_scaffold204G41641 Striga asiatica HOM05D004259 ORTHO05D005014 1.3e-133 480.3 364 67.3
arahy.Tifrunner.gnm1.ann1.1PWX74 Arachis hypogaea HOM05D004259 ORTHO05D005014 2.2e-133 479.6 365 66.6
arahy.Tifrunner.gnm1.ann1.63NC9C Arachis hypogaea HOM05D004259 ORTHO05D005014 2.2e-133 479.6 365 66.6
Sabra11G0061200 Salix brachista HOM05D004259 ORTHO05D005014 1.9e-132 476.5 359 66.9
ECA247G2793 Erigeron canadensis HOM05D004259 ORTHO05D005014 2.3e-130 469.5 319 72.1
Cc10_g04310 Coffea canephora HOM05D004259 ORTHO05D005014 3.9e-130 468.8 361 65.9
Rhsim10G0028600 Rhododendron simsii HOM05D004259 ORTHO05D005014 8.6e-130 467.6 362 65.2
Sc07g0003460 Simmondsia chinensis HOM05D004259 ORTHO05D005014 1.9e-129 466.5 319 71.8
CDE10G1325 Ceratophyllum demersum HOM05D004259 ORTHO05D005014 5.6e-129 464.9 353 64.0
TWI53G0519 Tripterygium wilfordii HOM05D004259 ORTHO05D005014 7.3e-129 464.5 361 65.1
SalBow3G4106 Salvia bowleyana HOM05D004259 ORTHO05D005014 1.2e-128 463.8 362 64.6
ATR0100G023 Amborella trichopoda HOM05D004259 ORTHO05D005014 1.4e-127 460.3 362 62.4
FAN27G2417 Fragaria x ananassa HOM05D004259 ORTHO05D005014 2.0e-126 456.4 362 61.6
MD15G1084600 Malus domestica HOM05D004259 ORTHO05D005014 8.3e-125 451.1 378 61.9
Os03g0184700 Oryza sativa ssp. japonica HOM05D004259 ORTHO05D005014 1.6e-123 446.8 357 62.7
Zm00001eb248940 Zea mays HOM05D004259 ORTHO05D005014 3.5e-123 445.7 359 61.0
CSS0037728 Camellia sinensis var. sinensis HOM05D004259 ORTHO05D005014 1.0e-122 444.1 362 63.3
Hma1.2p1_0718F.1_g208420 Hydrangea macrophylla HOM05D004259 ORTHO05D005014 1.9e-121 439.9 295 75.3
Haze_17543 Corylus avellana HOM05D004259 ORTHO05D005014 4.3e-121 438.7 297 73.7
Glyma.17G243200 Glycine max HOM05D004259 ORTHO05D005014 2.1e-120 436.4 294 71.1
GSVIVG01009522001 Vitis vinifera HOM05D004259 ORTHO05D005014 2.8e-120 436.0 293 73.4
Rhsim07G0229700 Rhododendron simsii HOM05D004259 ORTHO05D005014 3.4e-118 429.1 332 64.8
SalBow2G2610 Salvia bowleyana HOM05D004259 ORTHO05D005014 9.9e-118 427.6 387 58.9
Ah.05g168820 Amaranthus hybridus HOM05D001625 ORTHO05D005014 1.1e-111 407.5 299 65.9
Prupe.1G438300 Prunus persica HOM05D004259 ORTHO05D005014 6.4e-109 398.3 299 67.6
SalBow2G0695 Salvia bowleyana HOM05D004259 ORTHO05D005014 3.9e-106 389.0 288 67.7
vmacro04457 Vaccinium macrocarpon HOM05D004259 ORTHO05D005014 6.4e-101 371.7 362 54.7
Actinidia29866 Actinidia chinensis HOM05D004259 ORTHO05D005014 7.1e-100 368.2 362 53.3
Rhsim10G0028100 Rhododendron simsii HOM05D004259 ORTHO05D005014 3.9e-98 362.5 362 54.7
SEGI_21568 Sequoiadendron giganteum HOM05D004259 ORTHO05D005014 6.7e-98 361.7 286 58.7
AagrBONN_evm.TU.Sc2ySwM_344.5209 Anthoceros agrestis HOM05D004259 ORTHO05D005014 1.3e-96 357.5 362 50.0
Mapoly0106s0035 Marchantia polymorpha HOM05D004259 ORTHO05D005014 1.8e-95 353.6 317 55.2
Pp3c18_14740 Physcomitrium patens HOM05D004259 ORTHO05D005014 5.3e-95 352.1 361 49.9
COL.COLO4_14836 Corchorus olitorius HOM05D004259 ORTHO05D005014 2.5e-92 343.2 362 52.8
SHI12655 Sapria himalayana HOM05D004259 ORTHO05D005014 2.3e-90 336.7 365 51.2
CBR_g6665 Chara braunii HOM05D004259 ORTHO05D005014 3.0e-90 336.3 336 49.1
SMO147G0302 Selaginella moellendorffii HOM05D004259 ORTHO05D005014 1.6e-88 330.5 338 49.7
RcHm_v2.0_Chr6g0307531 Rosa chinensis HOM05D004259 ORTHO05D005014 1.5e-86 323.9 368 49.7
TWI53G0792 Tripterygium wilfordii HOM05D004259 ORTHO05D005014 9.7e-81 304.7 272 60.3
HPP92_027219 Vanilla planifolia HOM05D004259 ORTHO05D005014 2.6e-62 243.4 152 73.0
MCO16G222 Micromonas commoda HOM05D004259 ORTHO05D005014 1.6e-59 234.2 328 40.2
CDE10G0377 Ceratophyllum demersum HOM05D004259 ORTHO05D005014 4.4e-49 199.5 137 67.2
PRCOL_00004897 Prasinoderma coloniale HOM05D004259 ORTHO05D005014 1.0e-42 178.3 375 31.2
Nitab4.5_0000017g0120 Nicotiana tabacum HOM05D004259 ORTHO05D005014 1.8e-42 177.6 201 51.7
HPP92_027220 Vanilla planifolia HOM05D004259 ORTHO05D005014 3.5e-38 163.3 126 65.1
Gohir.D10G137766 Gossypium hirsutum HOM05D004259 ORTHO05D005014 7.2e-36 155.6 140 57.1
Cre03.g199400 Chlamydomonas reinhardtii HOM05D004259 ORTHO05D005014 1.0e-34 151.8 336 32.1
AL4G34080 Arabidopsis lyrata HOM05D004259 ORTHO05D005014 3.5e-30 136.7 104 69.2
Aa31LG5G22990 Aethionema arabicum HOM05D004259 ORTHO05D005014 3.3e-28 130.2 135 51.1
Cc00_g16720 Coffea canephora HOM05D004259 ORTHO05D005014 1.8e-26 124.4 117 56.4
Gohir.D12G080700 Gossypium hirsutum HOM05D004259 ORTHO05D005014 1.3e-24 118.2 88 69.3
Gorai.005G118700 Gossypium raimondii HOM05D004259 ORTHO05D005014 1.7e-24 117.9 85 67.1
Gohir.D02G104501 Gossypium hirsutum HOM05D004259 ORTHO05D005014 3.7e-24 116.7 85 65.9
Gorai.011G277900 Gossypium raimondii HOM05D004259 ORTHO05D005014 4.9e-24 116.3 84 71.4
Actinidia38053 Actinidia chinensis HOM05D004259 ORTHO05D005014 9.2e-23 112.1 90 63.3
Gohir.D03G074850 Gossypium hirsutum HOM05D004259 ORTHO05D005014 3.0e-21 107.1 80 68.8
Cfa024619 Carpinus fangiana HOM05D004259 ORTHO05D005014 3.9e-21 106.7 341 23.8
PSO724G0286 Papaver somniferum HOM05D004259 ORTHO05D005014 8.6e-21 105.5 110 49.1
Gohir.D01G124400 Gossypium hirsutum HOM05D004259 ORTHO05D005014 1.1e-20 105.1 79 68.4
Gohir.D02G123750 Gossypium hirsutum HOM05D004259 ORTHO05D005014 1.5e-20 104.8 79 68.4
Gorai.008G056700 Gossypium raimondii HOM05D004259 ORTHO05D005014 1.5e-20 104.8 80 67.5
PSO724G0742 Papaver somniferum HOM05D004259 ORTHO05D005014 1.5e-20 104.8 110 49.1
Gorai.004G133100 Gossypium raimondii HOM05D004259 ORTHO05D005014 3.3e-20 103.6 79 67.1
Gohir.D09G120150 Gossypium hirsutum HOM05D004259 ORTHO05D005014 4.3e-20 103.2 79 67.1
Gorai.005G130400 Gossypium raimondii HOM05D004259 ORTHO05D005014 4.3e-20 103.2 79 67.1
Gohir.D04G089650 Gossypium hirsutum HOM05D004259 ORTHO05D005014 6.2e-19 99.4 80 66.2
Aa31sc112G60 Aethionema arabicum HOM05D004259 ORTHO05D005014 4.0e-18 96.7 79 63.3
Gohir.D10G134400 Gossypium hirsutum HOM05D004259 ORTHO05D005014 5.2e-18 96.3 71 69.0
Gorai.012G099900 Gossypium raimondii HOM05D004259 ORTHO05D005014 8.9e-18 95.5 80 62.5
Cc06_g20720 Coffea canephora HOM05D004259 ORTHO05D005014 9.8e-17 92.0 105 52.4
Gorai.006G043100 Gossypium raimondii HOM05D004259 ORTHO05D005014 2.4e-15 87.4 102 51.0
SEGI_22221 Sequoiadendron giganteum HOM05D004259 ORTHO05D005014 4.6e-14 83.2 77 61.0
Gohir.D09G088725 Gossypium hirsutum HOM05D004259 ORTHO05D005014 3.0e-13 80.5 57 73.7
Cc11_g02680 Coffea canephora HOM05D004259 ORTHO05D005014 5.1e-13 79.7 63 63.5
EL10Ac4g08135 Beta vulgaris HOM05D004259 ORTHO05D005014 3.3e-12 77.0 44 84.1
Gorai.011G153000 Gossypium raimondii HOM05D004259 ORTHO05D005014 1.6e-11 74.7 102 45.1
Sabra15G0136400 Salix brachista HOM05D004259 ORTHO05D004947 1.1e-10 72.0 69 59.4
Cc00_g00370 Coffea canephora HOM05D004259 ORTHO05D005014 6.4e-08 62.8 53 62.3
Aa31LG5G23020 Aethionema arabicum HOM05D004259 ORTHO05D005014 1.1e-07 62.0 49 71.4
Gohir.D09G037800 Gossypium hirsutum HOM05D004259 ORTHO05D005014 7.1e-07 59.3 44 72.7
Cc01_g09720 Coffea canephora HOM05D004259 ORTHO05D005014 6.0e-06 56.2 44 68.2


User provided reference genes

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