Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g073410.3 Solanum lycopersicum HOM05D006537 ORTHO05D008186 7.8e-138 493.8 254 100.0
Sopen06g029790 Solanum pennellii HOM05D006537 ORTHO05D008186 7.8e-138 493.8 254 100.0
PGSC0003DMG400027008 Solanum tuberosum HOM05D006537 ORTHO05D008186 2.5e-136 488.8 254 98.4
Peaxi162Scf00375g00618 Petunia axillaris HOM05D006537 ORTHO05D008186 9.3e-131 470.3 254 93.3
Nitab4.5_0004579g0020 Nicotiana tabacum HOM05D006537 ORTHO05D008186 1.8e-126 456.1 246 93.9
Dinv22722 Davidia involucrata HOM05D006537 ORTHO05D008186 6.5e-116 421.0 248 83.5
CAN.G65.183 Capsicum annuum HOM05D006537 ORTHO05D008186 3.2e-115 418.7 254 85.4
MD04G1039500 Malus domestica HOM05D006537 ORTHO05D008186 8.7e-113 410.6 248 80.2
CSS0005792 Camellia sinensis var. sinensis HOM05D006537 ORTHO05D008186 4.3e-112 408.3 245 82.9
TWI63G0033 Tripterygium wilfordii HOM05D006537 ORTHO05D008186 7.4e-112 407.5 247 80.2
GSVIVG01010746001 Vitis vinifera HOM05D006537 ORTHO05D008186 2.8e-111 405.6 246 79.7
Prupe.1G190300 Prunus persica HOM05D006537 ORTHO05D008186 6.3e-111 404.4 248 78.2
Atru.chr3.1537 Acer truncatum HOM05D006537 ORTHO05D008186 5.3e-110 401.4 252 76.6
Potri.007G127400 Populus trichocarpa HOM05D006537 ORTHO05D008186 5.3e-110 401.4 243 81.5
Actinidia35970 Actinidia chinensis HOM05D006537 ORTHO05D008186 6.9e-110 401.0 246 80.5
CiPaw.01G101300 Carya illinoinensis HOM05D006537 ORTHO05D008186 6.9e-110 401.0 248 78.6
Gohir.D02G016700 Gossypium hirsutum HOM05D006537 ORTHO05D008186 6.9e-110 401.0 245 79.6
Thecc.04G185300 Theobroma cacao HOM05D006537 ORTHO05D008186 1.5e-109 399.8 248 79.4
Cc00_g09850 Coffea canephora HOM05D006537 ORTHO05D008186 2.0e-109 399.4 249 79.5
Gohir.A02G015200 Gossypium hirsutum HOM05D006537 ORTHO05D008186 2.6e-109 399.1 245 79.2
Gorai.005G020200 Gossypium raimondii HOM05D006537 ORTHO05D008186 3.4e-109 398.7 245 79.2
Duzib212G0958 Durio zibethinus HOM05D006537 ORTHO05D008186 4.5e-109 398.3 248 79.0
Haze_01534 Corylus avellana HOM05D006537 ORTHO05D008186 5.9e-109 397.9 248 77.8
QL10p048350 Quercus lobata HOM05D006537 ORTHO05D008186 1.0e-108 397.1 248 76.6
TAR633G2589 Trochodendron aralioides HOM05D006537 ORTHO05D008186 1.0e-108 397.1 245 80.4
AL4G26710 Arabidopsis lyrata HOM05D006537 ORTHO05D008186 1.3e-108 396.7 245 78.4
AT2G31440 Arabidopsis thaliana HOM05D006537 ORTHO05D008186 1.7e-108 396.4 245 78.0
BcaC01g05952 Brassica carinata HOM05D006537 ORTHO05D008186 5.0e-108 394.8 248 77.4
C03p20710 Brassica napus HOM05D006537 ORTHO05D008186 5.0e-108 394.8 248 77.4
BolC3t14452H Brassica oleracea HOM05D006537 ORTHO05D008186 5.0e-108 394.8 248 77.4
BraA03t11027Z Brassica rapa HOM05D006537 ORTHO05D008186 5.0e-108 394.8 247 78.1
ClCG08G004470 Citrullus lanatus HOM05D006537 ORTHO05D008186 5.0e-108 394.8 248 77.4
MELO3C011641.2 Cucumis melo HOM05D006537 ORTHO05D008186 6.5e-108 394.4 248 77.4
Ciclev10021930m.g Citrus clementina HOM05D006537 ORTHO05D008186 8.4e-108 394.0 242 78.9
Sp4g13920 Schrenkiella parvula HOM05D006537 ORTHO05D008186 8.4e-108 394.0 250 76.4
A03p17600 Brassica napus HOM05D006537 ORTHO05D008186 1.4e-107 393.3 247 77.7
Rhsim09G0028500 Rhododendron simsii HOM05D006537 ORTHO05D008186 1.4e-107 393.3 257 78.2
SGA_v2.0_scaffold74G24571 Striga asiatica HOM05D006537 ORTHO05D008186 1.4e-107 393.3 248 77.4
Carub.0004s1277 Capsella rubella HOM05D006537 ORTHO05D008186 3.2e-107 392.1 245 76.7
Aqoxy2G04100 Aquilegia oxysepala HOM05D006537 ORTHO05D008186 7.2e-107 391.0 248 75.8
Eucgr.A00074 Eucalyptus grandis HOM05D006537 ORTHO05D008186 7.2e-107 391.0 242 77.7
Migut.C00288 Erythranthe guttata HOM05D006537 ORTHO05D008186 9.3e-107 390.6 248 78.2
Lj3g0010197 Lotus japonicus HOM05D006537 ORTHO05D008186 9.3e-107 390.6 248 75.4
PSO675G9308 Papaver somniferum HOM05D006537 ORTHO05D008186 1.2e-106 390.2 245 77.6
Duzib268G1074 Durio zibethinus HOM05D006537 ORTHO05D008186 1.6e-106 389.8 248 77.0
PSO732G0008 Papaver somniferum HOM05D006537 ORTHO05D008186 1.6e-106 389.8 245 77.6
arahy.Tifrunner.gnm1.ann1.RQ8JR0 Arachis hypogaea HOM05D006537 ORTHO05D008186 2.1e-106 389.4 250 75.2
arahy.Tifrunner.gnm1.ann1.W0CVEC Arachis hypogaea HOM05D006537 ORTHO05D008186 2.1e-106 389.4 250 75.2
Eucgr.A00271 Eucalyptus grandis HOM05D006537 ORTHO05D008186 2.1e-106 389.4 242 77.7
Ca_20779_v3 Cicer arietinum L. HOM05D006537 ORTHO05D008186 3.5e-106 388.7 248 75.0
FvH4_4g11160 Fragaria vesca HOM05D006537 ORTHO05D008186 3.5e-106 388.7 245 78.4
CARHR125090 Cardamine hirsuta HOM05D006537 ORTHO05D008186 7.9e-106 387.5 250 76.0
Oeu011639.1 Olea europaea HOM05D006537 ORTHO05D008186 7.9e-106 387.5 248 78.2
Thhalv10017140m.g Eutrema salsugineum HOM05D006537 ORTHO05D008186 1.3e-105 386.7 245 78.0
Phvul.011G055200 Phaseolus vulgaris HOM05D006537 ORTHO05D008186 1.3e-105 386.7 248 76.2
Actinidia34608 Actinidia chinensis HOM05D006537 ORTHO05D008186 1.8e-105 386.3 246 77.2
AUR62015408 Chenopodium quinoa HOM05D006537 ORTHO05D008186 3.0e-105 385.6 245 77.1
Medtr4g067050 Medicago truncatula HOM05D006537 ORTHO05D008186 3.9e-105 385.2 242 77.3
BcaB01g04045 Brassica carinata HOM05D006537 ORTHO05D008186 5.1e-105 384.8 247 76.9
Psat7g214000 Pisum sativum HOM05D006537 ORTHO05D008186 6.7e-105 384.4 242 76.4
CsaV3_6G003840 Cucumis sativus L. HOM05D006537 ORTHO05D008186 8.7e-105 384.0 244 77.0
TPR.G34202 Trifolium pratense HOM05D006537 ORTHO05D008186 1.9e-104 382.9 242 75.2
Glyma.12G053200 Glycine max HOM05D006537 ORTHO05D008186 4.3e-104 381.7 242 75.2
Nitab4.5_0003132g0110 Nicotiana tabacum HOM05D006537 ORTHO05D008186 4.3e-104 381.7 203 95.6
VMungo1127G2200 Vigna mungo HOM05D006537 ORTHO05D008186 9.7e-104 380.6 248 75.0
CANSAT78G1337 Cannabis sativa HOM05D006537 ORTHO05D008186 1.3e-103 380.2 246 76.0
Sed0000584 Sechium edule HOM05D006537 ORTHO05D008186 1.6e-103 379.8 252 75.4
unitig_747.g21541 Utricularia gibba HOM05D006537 ORTHO05D008186 4.8e-103 378.3 239 78.2
Glyma.11G128700 Glycine max HOM05D006537 ORTHO05D008186 6.3e-103 377.9 242 75.6
HanXRQChr14g0433111 Helianthus annuus HOM05D006537 ORTHO05D008186 1.5e-101 373.2 245 73.9
Lalb_Chr01g0003221 Lupinus albus HOM05D006537 ORTHO05D008186 2.9e-100 369.0 245 74.3
EL10Ac3g05587 Beta vulgaris HOM05D006537 ORTHO05D008186 6.5e-100 367.9 264 70.8
RcHm_v2.0_Chr4g0407291 Rosa chinensis HOM05D006537 ORTHO05D008186 8.5e-100 367.5 245 75.9
THA.LOC104826193 Tarenaya hassleriana HOM05D006537 ORTHO05D008186 2.5e-99 365.9 242 76.0
Aa31LG5G5440 Aethionema arabicum HOM05D006537 ORTHO05D008186 9.4e-99 364.0 245 71.8
ECA238G3138 Erigeron canadensis HOM05D000961 ORTHO05D000001 9.4e-99 364.0 236 76.7
Lsat_1_v5_gn_2_34721 Lactuca sativa HOM05D006537 ORTHO05D008186 4.6e-98 361.7 245 73.5
Nn1g09574 Nelumbo nucifera HOM05D006537 ORTHO05D008186 6.7e-97 357.8 246 71.5
CDE04G1858 Ceratophyllum demersum HOM05D006537 ORTHO05D008186 2.2e-95 352.8 246 68.7
vmacro22675 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 3.4e-93 345.5 203 83.7
Manes.04G042325 Manihot esculenta HOM05D006537 ORTHO05D008186 2.9e-92 342.4 210 80.5
Zm00001eb237480 Zea mays HOM05D006537 ORTHO05D008186 3.8e-92 342.0 250 66.8
COL.COLO4_24411 Corchorus olitorius HOM05D006537 ORTHO05D008186 1.4e-91 340.1 208 80.3
HPP92_005584 Vanilla planifolia HOM05D006537 ORTHO05D008186 4.2e-91 338.6 248 68.5
HPP92_005589 Vanilla planifolia HOM05D006537 ORTHO05D008186 5.5e-91 338.2 248 68.5
Sabra07G0103400 Salix brachista HOM05D006537 ORTHO05D008186 4.7e-90 335.1 225 76.9
ATR0686G132 Amborella trichopoda HOM05D006537 ORTHO05D008186 1.3e-87 327.0 245 66.1
SEGI_14947 Sequoiadendron giganteum HOM05D006537 ORTHO05D008186 1.3e-87 327.0 239 66.9
Os02g0272600 Oryza sativa ssp. japonica HOM05D006537 ORTHO05D008186 1.7e-87 326.6 246 65.4
Dinv44198 Davidia involucrata HOM05D006537 ORTHO05D008186 2.2e-87 326.2 184 89.7
AUR62002287 Chenopodium quinoa HOM05D006537 ORTHO05D008186 1.3e-84 317.0 198 74.7
Sc25g0002980 Simmondsia chinensis HOM05D006537 ORTHO05D008186 1.3e-84 317.0 248 66.9
PGR083G1737 Punica granatum HOM05D006537 ORTHO05D008186 4.2e-83 312.0 246 65.0
A10p04320 Brassica napus HOM05D006537 ORTHO05D008186 8.0e-82 307.8 196 72.4
Cpa.g.sc409.1 Carica papaya HOM05D006537 ORTHO05D008186 1.1e-80 303.9 202 75.2
Lj6A56G22 Lonicera japonica HOM05D006537 ORTHO05D008186 1.3e-76 290.4 245 63.3
Hund03149 Selenicereus undatus HOM05D006537 ORTHO05D008186 1.6e-74 283.5 266 62.0
MSTRG.24999 Avicennia marina HOM05D006537 ORTHO05D008186 2.3e-73 279.6 246 60.6
AagrBONN_evm.TU.Sc2ySwM_344.2170 Anthoceros agrestis HOM05D006537 ORTHO05D008186 1.2e-69 267.3 236 55.1
Mapoly0042s0024 Marchantia polymorpha HOM05D006537 ORTHO05D008186 1.5e-67 260.4 241 53.5
SMO174G0097 Selaginella moellendorffii HOM05D006537 ORTHO05D008186 8.3e-63 244.6 238 52.5
BraA10t42709Z Brassica rapa HOM05D006537 ORTHO05D008186 2.4e-62 243.0 158 73.4
Pp3c14_4280 Physcomitrium patens HOM05D006537 ORTHO05D008186 8.6e-60 234.6 244 48.0
Pp3c10_5780 Physcomitrium patens HOM05D006537 ORTHO05D008186 9.5e-59 231.1 251 46.2
FAN07G2858 Fragaria x ananassa HOM05D006537 ORTHO05D008186 1.6e-58 230.3 202 63.9
PSO675G1145 Papaver somniferum HOM05D006537 ORTHO05D008186 2.5e-51 206.5 152 68.4
PSO675G6606 Papaver somniferum HOM05D006537 ORTHO05D008186 4.3e-51 205.7 146 68.5
PSO229G0026 Papaver somniferum HOM05D006537 ORTHO05D008186 1.6e-50 203.8 143 69.2
SalBow7G4202 Salvia bowleyana HOM05D006537 ORTHO05D008186 3.1e-49 199.5 131 74.8
SHI21233 Sapria himalayana HOM05D006537 ORTHO05D008186 7.5e-48 194.9 157 61.1
PSO832G3398 Papaver somniferum HOM05D006537 ORTHO05D008186 6.4e-47 191.8 116 80.2
PSO017G0422 Papaver somniferum HOM05D006537 ORTHO05D008186 3.2e-46 189.5 116 79.3
DCAR_022903 Daucus carota HOM05D006537 ORTHO05D008186 2.1e-37 160.2 119 71.4
BraA10t42699Z Brassica rapa HOM05D006537 ORTHO05D008186 3.1e-33 146.4 95 73.7
A10p04420 Brassica napus HOM05D006537 ORTHO05D008186 5.2e-33 145.6 95 73.7
Cre13.g576300 Chlamydomonas reinhardtii HOM05D006537 ORTHO05D008186 4.4e-32 142.5 231 37.7
Lj6P622T45 Lonicera japonica HOM05D006537 ORTHO05D008186 1.7e-31 140.6 91 72.5
CBR_g29804 Chara braunii HOM05D006537 ORTHO05D008186 2.8e-18 96.7 71 66.2
vmacro00700 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 3.1e-17 93.2 166 39.2
PRCOL_00006256 Prasinoderma coloniale HOM05D006537 ORTHO05D008186 1.3e-15 87.8 238 28.2
Sopen06g005930 Solanum pennellii HOM05D006537 ORTHO05D008186 1.2e-08 64.7 38 97.4
Cpa.g.c46401 Carica papaya HOM05D006537 ORTHO05D008186 9.3e-06 55.1 39 59.0


User provided reference genes

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