Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g073170.1 Solanum lycopersicum HOM05D007459 ORTHO05D009234 7.4e-84 313.9 169 100.0
Sopen06g029540 Solanum pennellii HOM05D007459 ORTHO05D009234 1.8e-82 309.3 169 98.2
PGSC0003DMG400027018 Solanum tuberosum HOM05D007459 ORTHO05D009234 4.5e-81 304.7 169 97.0
Nitab4.5_0002553g0080 Nicotiana tabacum HOM05D007459 ORTHO05D009234 2.0e-73 279.3 170 89.4
Nitab4.5_0013525g0010 Nicotiana tabacum HOM05D007459 ORTHO05D009234 5.9e-73 277.7 169 88.8
Peaxi162Scf00180g00063 Petunia axillaris HOM05D007459 ORTHO05D009234 7.7e-73 277.3 169 87.6
Cc03_g12180 Coffea canephora HOM05D007459 ORTHO05D009234 1.7e-51 206.5 174 63.8
Lj6A129T18 Lonicera japonica HOM05D007459 ORTHO05D009234 1.2e-49 200.3 170 62.4
CSS0017730 Camellia sinensis var. sinensis HOM05D007459 ORTHO05D009234 1.5e-47 193.4 172 61.6
Hma1.2p1_2359F.1_g320593 Hydrangea macrophylla HOM05D007459 ORTHO05D009234 9.4e-47 190.7 171 58.5
Dinv44169 Davidia involucrata HOM05D007459 ORTHO05D009234 1.6e-46 189.9 169 60.4
Hma1.2p1_0554F.1_g177940 Hydrangea macrophylla HOM05D007459 ORTHO05D009234 4.7e-46 188.3 171 57.9
SGA_v2.0_scaffold25G10994 Striga asiatica HOM05D007459 ORTHO05D009234 1.0e-45 187.2 170 61.8
Nn1g09730 Nelumbo nucifera HOM05D007459 ORTHO05D009234 2.0e-44 183.0 168 56.0
TAR362G1157 Trochodendron aralioides HOM05D007459 ORTHO05D009234 2.0e-44 183.0 168 55.4
unitig_85.g27223 Utricularia gibba HOM05D007459 ORTHO05D009234 1.3e-43 180.3 167 55.7
Thhalv10001662m.g Eutrema salsugineum HOM05D007459 ORTHO05D009234 4.8e-43 178.3 169 55.6
Duzib151G0483 Durio zibethinus HOM05D007459 ORTHO05D009234 1.4e-42 176.8 169 56.8
QL10p052586 Quercus lobata HOM05D007459 ORTHO05D009234 4.1e-42 175.3 172 56.4
AL4G42340 Arabidopsis lyrata HOM05D007459 ORTHO05D009234 9.1e-42 174.1 169 56.2
AT2G43540 Arabidopsis thaliana HOM05D007459 ORTHO05D009234 9.1e-42 174.1 168 56.0
CARHR138660 Cardamine hirsuta HOM05D007459 ORTHO05D009234 1.6e-41 173.3 169 54.4
Migut.N03078 Erythranthe guttata HOM05D007459 ORTHO05D009234 2.0e-41 172.9 167 58.7
Potri.007G134400 Populus trichocarpa HOM05D007459 ORTHO05D009234 2.7e-41 172.6 174 53.4
Lalb_Chr22g0352011 Lupinus albus HOM05D007459 ORTHO05D009234 3.5e-41 172.2 168 53.0
vmacro06567 Vaccinium macrocarpon HOM05D007459 ORTHO05D009234 3.5e-41 172.2 174 52.3
Sabra07G0109100 Salix brachista HOM05D007459 ORTHO05D009234 4.5e-41 171.8 174 52.9
A04p32820 Brassica napus HOM05D007459 ORTHO05D009234 7.7e-41 171.0 168 54.2
BraA04t18744Z Brassica rapa HOM05D007459 ORTHO05D009234 7.7e-41 171.0 168 54.2
Gohir.D02G110600 Gossypium hirsutum HOM05D007459 ORTHO05D009234 7.7e-41 171.0 169 55.6
Gorai.005G125500 Gossypium raimondii HOM05D007459 ORTHO05D009234 7.7e-41 171.0 169 55.6
COL.COLO4_28394 Corchorus olitorius HOM05D007459 ORTHO05D009234 1.0e-40 170.6 170 57.1
Thecc.04G171000 Theobroma cacao HOM05D007459 ORTHO05D009234 2.3e-40 169.5 169 55.0
Carub.0004s2600 Capsella rubella HOM05D007459 ORTHO05D009234 2.9e-40 169.1 171 52.6
Ciclev10022478m.g Citrus clementina HOM05D007459 ORTHO05D009234 3.8e-40 168.7 181 54.1
C04p70510 Brassica napus HOM05D007459 ORTHO05D009234 5.0e-40 168.3 168 53.6
CiPaw.01G173000 Carya illinoinensis HOM05D007459 ORTHO05D009234 5.0e-40 168.3 171 55.0
Haze_01404 Corylus avellana HOM05D007459 ORTHO05D009234 5.0e-40 168.3 170 55.9
Gohir.A02G092500 Gossypium hirsutum HOM05D007459 ORTHO05D009234 5.0e-40 168.3 170 54.7
BcaB06g29324 Brassica carinata HOM05D007459 ORTHO05D009234 6.6e-40 167.9 168 53.6
BcaC02g07169 Brassica carinata HOM05D007459 ORTHO05D009234 1.1e-39 167.2 169 53.8
BcaC02g07170 Brassica carinata HOM05D007459 ORTHO05D009234 1.1e-39 167.2 169 53.8
BolC4t28553H Brassica oleracea HOM05D007459 ORTHO05D009234 1.1e-39 167.2 169 53.8
Manes.04G050800 Manihot esculenta HOM05D007459 ORTHO05D009234 1.1e-39 167.2 170 51.2
Sp4g25650 Schrenkiella parvula HOM05D007459 ORTHO05D009234 2.5e-39 166.0 172 53.5
Aa31LG1G25280 Aethionema arabicum HOM05D007459 ORTHO05D009234 4.2e-39 165.2 168 53.0
Rhsim09G0013300 Rhododendron simsii HOM05D007459 ORTHO05D009234 7.2e-39 164.5 172 52.3
Cfa015229 Carpinus fangiana HOM05D007459 ORTHO05D009234 9.5e-39 164.1 170 54.7
Haze_01410 Corylus avellana HOM05D007459 ORTHO05D009234 2.1e-38 162.9 170 54.7
Sc06g0007410 Simmondsia chinensis HOM05D007459 ORTHO05D009234 2.1e-38 162.9 168 53.0
MELO3C017778.2 Cucumis melo HOM05D007459 ORTHO05D009234 6.1e-38 161.4 170 52.9
C04p70520 Brassica napus HOM05D007459 ORTHO05D009234 1.0e-37 160.6 159 54.1
THA.LOC104805901 Tarenaya hassleriana HOM05D007459 ORTHO05D009234 1.8e-37 159.8 174 52.3
BolC4t28554H Brassica oleracea HOM05D007459 ORTHO05D009234 3.0e-37 159.1 157 54.1
MD04G1047100 Malus domestica HOM05D007459 ORTHO05D009234 4.0e-37 158.7 170 52.4
PGR142G0909 Punica granatum HOM05D007459 ORTHO05D009234 4.0e-37 158.7 168 52.4
Atru.chr4.1350 Acer truncatum HOM05D007459 ORTHO05D009234 6.8e-37 157.9 174 54.0
CANSAT56G1213 Cannabis sativa HOM05D007459 ORTHO05D009234 6.8e-37 157.9 172 51.7
MBI11_g23942_MAGBIO Magnolia biondii HOM05D004197 ORTHO05D004975 7.5e-36 154.5 160 51.9
Sed0000488 Sechium edule HOM05D007459 ORTHO05D009234 7.5e-36 154.5 168 51.8
CsaV3_4G002640 Cucumis sativus L. HOM05D007459 ORTHO05D009234 9.8e-36 154.1 165 52.1
Prupe.1G201700 Prunus persica HOM05D007459 ORTHO05D009234 1.7e-35 153.3 170 52.9
Lj3g0013618 Lotus japonicus HOM05D007459 ORTHO05D009234 2.8e-35 152.5 171 50.3
Lsat_1_v5_gn_8_158021 Lactuca sativa HOM05D007459 ORTHO05D009234 4.9e-35 151.8 168 48.8
RcHm_v2.0_Chr2g0138101 Rosa chinensis HOM05D007459 ORTHO05D009234 6.3e-35 151.4 170 50.0
Actinidia27099 Actinidia chinensis HOM05D007459 ORTHO05D009234 2.4e-34 149.4 141 57.4
FvH4_6g31340 Fragaria vesca HOM05D007459 ORTHO05D009234 3.1e-34 149.1 169 49.7
FAN14G2685 Fragaria x ananassa HOM05D007459 ORTHO05D009234 3.1e-34 149.1 169 49.7
TPR.G6565 Trifolium pratense HOM05D007459 ORTHO05D009234 3.1e-34 149.1 168 50.0
FAN05G5726 Fragaria x ananassa HOM05D007459 ORTHO05D009234 4.1e-34 148.7 169 49.7
Psat5g291760 Pisum sativum HOM05D007459 ORTHO05D009234 5.4e-34 148.3 169 52.1
HPP92_004524 Vanilla planifolia HOM05D007459 ORTHO05D009234 1.2e-33 147.1 167 50.3
HanXRQChr14g0433791 Helianthus annuus HOM05D007459 ORTHO05D009234 2.7e-33 146.0 167 47.3
TPR.G13012 Trifolium pratense HOM05D007459 ORTHO05D009234 2.7e-33 146.0 168 48.8
Ca_01236_v3 Cicer arietinum L. HOM05D007459 ORTHO05D009234 3.5e-33 145.6 171 47.4
Medtr2g099440 Medicago truncatula HOM05D007459 ORTHO05D009234 7.8e-33 144.4 168 50.0
TWI38G0757 Tripterygium wilfordii HOM05D007459 ORTHO05D009234 1.0e-32 144.1 159 50.9
Haze_01399 Corylus avellana HOM05D007459 ORTHO05D009234 8.6e-32 141.0 161 50.9
BcaC02g07168 Brassica carinata HOM05D007459 ORTHO05D009234 1.5e-31 140.2 142 52.8
CDE09G0571 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 9.5e-31 137.5 138 49.3
Phvul.005G155700 Phaseolus vulgaris HOM05D007459 ORTHO05D009234 1.6e-30 136.7 166 44.0
Glyma.13G346600 Glycine max HOM05D007459 ORTHO05D009234 3.1e-29 132.5 168 47.0
DCAR_028411 Daucus carota HOM05D007459 ORTHO05D009234 5.2e-29 131.7 167 46.7
ATR0743G068 Amborella trichopoda HOM05D007459 ORTHO05D009234 2.0e-28 129.8 171 46.2
Os04g0495300 Oryza sativa ssp. japonica HOM05D007459 ORTHO05D009234 4.4e-28 128.6 169 42.6
EL10Ac3g06032 Beta vulgaris HOM05D007459 ORTHO05D009234 9.8e-28 127.5 172 48.3
HPP92_004533 Vanilla planifolia HOM05D007459 ORTHO05D009234 1.6e-25 120.2 130 49.2
Zm00001eb078650 Zea mays HOM05D007459 ORTHO05D009234 2.7e-25 119.4 169 42.6
AUR62002368 Chenopodium quinoa HOM05D007459 ORTHO05D009234 1.0e-24 117.5 170 44.1
AUR62023818 Chenopodium quinoa HOM05D007459 ORTHO05D009234 1.0e-24 117.5 170 44.7
Duzib151G0582 Durio zibethinus HOM05D007459 ORTHO05D009234 1.9e-23 113.2 123 48.8
ClCG07G015090 Citrullus lanatus HOM05D007459 ORTHO05D009234 3.6e-22 109.0 168 40.5
Ah.07g202500 Amaranthus hybridus HOM05D007459 ORTHO05D009234 1.4e-21 107.1 172 43.6
Eucgr.L02147 Eucalyptus grandis HOM05D007459 ORTHO05D009234 1.7e-19 100.1 146 42.5
EL10Ac5g11171 Beta vulgaris HOM05D007459 ORTHO05D009234 3.9e-16 89.0 120 50.0
EL10Ac9g22812 Beta vulgaris HOM05D007459 ORTHO05D009234 5.1e-16 88.6 151 43.0
EL10Ac4g10228 Beta vulgaris HOM05D007459 ORTHO05D009234 3.1e-13 79.3 133 39.1
Mapoly0038s0008 Marchantia polymorpha HOM05D007459 ORTHO05D009234 2.0e-12 76.6 151 33.1
SEGI_40343 Sequoiadendron giganteum HOM05D007459 ORTHO05D009234 2.6e-12 76.3 137 35.0
CAN.G1030.15 Capsicum annuum HOM05D007459 ORTHO05D009234 1.7e-11 73.6 58 69.0
Pp3c3_12780 Physcomitrium patens HOM05D007459 ORTHO05D009234 5.4e-10 68.6 184 29.3
Pp3c17_9330 Physcomitrium patens HOM05D007459 ORTHO05D009234 1.6e-09 67.0 179 29.1
EL10Ac6g13927 Beta vulgaris HOM05D000045 ORTHO05D010054 6.6e-08 61.6 100 45.0
ECA238G4467 Erigeron canadensis HOM05D007459 ORTHO05D009234 2.8e-06 56.2 73 43.8


User provided reference genes

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