Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g071260.4 Solanum lycopersicum HOM05D007939 ORTHO05D010027 3.9e-38 161.0 83 100.0
PGSC0003DMG400033058 Solanum tuberosum HOM05D007939 ORTHO05D010027 7.2e-24 113.6 59 96.6
MD14G1189000 Malus domestica HOM05D007939 ORTHO05D010027 1.2e-15 86.3 56 73.2
Peaxi162Scf00689g00418 Petunia axillaris HOM05D007939 ORTHO05D010027 2.7e-15 85.1 66 72.7
Lj9A455T57 Lonicera japonica HOM05D007939 ORTHO05D010027 3.6e-15 84.7 50 80.0
Cfa019042 Carpinus fangiana HOM05D007939 ORTHO05D010027 6.1e-15 84.0 52 78.8
Ciclev10023252m.g Citrus clementina HOM05D007939 ORTHO05D010027 6.1e-15 84.0 55 76.4
CsaV3_1G008140 Cucumis sativus L. HOM05D007939 ORTHO05D010027 6.1e-15 84.0 46 89.1
Oeu041591.1 Olea europaea HOM05D007939 ORTHO05D010027 1.4e-14 82.8 59 72.9
Sed0024093 Sechium edule HOM05D007939 ORTHO05D010027 1.4e-14 82.8 52 78.8
Migut.D01894 Erythranthe guttata HOM05D007939 ORTHO05D010027 1.8e-14 82.4 59 72.9
ClCG01G014170 Citrullus lanatus HOM05D007939 ORTHO05D010027 2.3e-14 82.0 45 88.9
MELO3C002231.2 Cucumis melo HOM05D007939 ORTHO05D010027 2.3e-14 82.0 45 88.9
Potri.012G074300 Populus trichocarpa HOM05D007939 ORTHO05D010027 2.3e-14 82.0 50 80.0
Prupe.5G181400 Prunus persica HOM05D007939 ORTHO05D010027 4.0e-14 81.3 55 72.7
CiPaw.11G033900 Carya illinoinensis HOM05D007939 ORTHO05D010027 5.2e-14 80.9 52 75.0
CAN.G628.63 Capsicum annuum HOM05D007939 ORTHO05D010027 6.8e-14 80.5 45 86.7
Nn4g22962 Nelumbo nucifera HOM05D007939 ORTHO05D010027 1.2e-13 79.7 57 70.2
Hund02701 Selenicereus undatus HOM05D007939 ORTHO05D010027 1.2e-13 79.7 50 80.0
HanXRQChr09g0271581 Helianthus annuus HOM05D007939 ORTHO05D010027 2.0e-13 79.0 56 69.6
Carub.0005s1396 Capsella rubella HOM05D007939 ORTHO05D010027 2.6e-13 78.6 57 70.2
C03p72070 Brassica napus HOM05D007939 ORTHO05D010027 3.4e-13 78.2 57 70.2
BolC3t19505H Brassica oleracea HOM05D007939 ORTHO05D010027 3.4e-13 78.2 57 70.2
BraA06t25058Z Brassica rapa HOM05D007939 ORTHO05D010027 3.4e-13 78.2 57 70.2
CARHR156540 Cardamine hirsuta HOM05D007939 ORTHO05D010027 3.4e-13 78.2 57 71.9
Manes.14G071800 Manihot esculenta HOM05D007939 ORTHO05D010027 3.4e-13 78.2 55 69.1
Nn3g17057 Nelumbo nucifera HOM05D007939 ORTHO05D010027 4.4e-13 77.8 57 68.4
BcaB01g00871 Brassica carinata HOM05D007939 ORTHO05D010027 5.7e-13 77.4 57 68.4
Cc04_g16150 Coffea canephora HOM05D007939 ORTHO05D010027 5.7e-13 77.4 58 69.0
Thhalv10010893m.g Eutrema salsugineum HOM05D007939 ORTHO05D010027 5.7e-13 77.4 57 70.2
Nitab4.5_0000003g0340 Nicotiana tabacum HOM05D007939 ORTHO05D010027 5.7e-13 77.4 49 75.5
Atru.chr9.2381 Acer truncatum HOM05D007939 ORTHO05D010027 7.5e-13 77.0 52 71.2
Gohir.A12G276700 Gossypium hirsutum HOM05D007939 ORTHO05D010027 7.5e-13 77.0 52 71.2
Gohir.D12G277700 Gossypium hirsutum HOM05D007939 ORTHO05D010027 7.5e-13 77.0 52 71.2
Gorai.008G298400 Gossypium raimondii HOM05D007939 ORTHO05D010027 7.5e-13 77.0 52 71.2
Nitab4.5_0002101g0080 Nicotiana tabacum HOM05D007939 ORTHO05D010027 7.5e-13 77.0 50 78.0
COL.COLO4_05795 Corchorus olitorius HOM05D007939 ORTHO05D010027 1.3e-12 76.3 45 80.0
DCAR_021553 Daucus carota HOM05D007939 ORTHO05D010027 1.3e-12 76.3 52 71.2
Lj4g0008013 Lotus japonicus HOM05D007939 ORTHO05D010027 1.3e-12 76.3 55 65.5
Rhsim12G0160700 Rhododendron simsii HOM05D007939 ORTHO05D010027 1.3e-12 76.3 61 62.3
Solyc03g113670.4 Solanum lycopersicum HOM05D007939 ORTHO05D010027 1.3e-12 76.3 60 65.0
Aa31LG4G16500 Aethionema arabicum HOM05D007939 ORTHO05D010027 1.7e-12 75.9 45 80.0
RcHm_v2.0_Chr7g0179931 Rosa chinensis HOM05D007939 ORTHO05D010027 1.7e-12 75.9 50 72.0
Haze_07419 Corylus avellana HOM05D007939 ORTHO05D010027 2.2e-12 75.5 45 80.0
Sp5g14120 Schrenkiella parvula HOM05D007939 ORTHO05D010027 2.2e-12 75.5 57 68.4
CSS0005245 Camellia sinensis var. sinensis HOM05D007939 ORTHO05D010027 2.8e-12 75.1 47 76.6
Glyma.05G032500 Glycine max HOM05D007939 ORTHO05D010027 3.7e-12 74.7 50 72.0
AL5G27140 Arabidopsis lyrata HOM05D007939 ORTHO05D010027 4.8e-12 74.3 57 66.7
Thecc.03G001700 Theobroma cacao HOM05D007939 ORTHO05D010027 4.8e-12 74.3 46 76.1
SalBow3G2524 Salvia bowleyana HOM05D007939 ORTHO05D010027 6.3e-12 73.9 58 62.1
CSS0025662 Camellia sinensis var. sinensis HOM05D007939 ORTHO05D010027 8.3e-12 73.6 47 74.5
CAN.G853.35 Capsicum annuum HOM05D007939 ORTHO05D010027 1.1e-11 73.2 60 63.3
PSO591G0029 Papaver somniferum HOM05D007939 ORTHO05D010027 1.1e-11 73.2 48 75.0
Peaxi162Scf00017g02235 Petunia axillaris HOM05D007939 ORTHO05D010027 1.1e-11 73.2 58 62.1
Phvul.003G196000 Phaseolus vulgaris HOM05D007939 ORTHO05D010027 1.1e-11 73.2 50 72.0
EL10Ac5g10844 Beta vulgaris HOM05D007939 ORTHO05D010027 1.4e-11 72.8 48 68.8
BcaB02g10687 Brassica carinata HOM05D007939 ORTHO05D010027 1.4e-11 72.8 45 77.8
C03p66950 Brassica napus HOM05D007939 ORTHO05D010027 1.4e-11 72.8 52 71.2
Rhsim08G0164200 Rhododendron simsii HOM05D007939 ORTHO05D010027 1.4e-11 72.8 46 73.9
BcaC01g01771 Brassica carinata HOM05D007939 ORTHO05D010027 1.8e-11 72.4 45 75.6
Lalb_Chr13g0298021 Lupinus albus HOM05D007939 ORTHO05D010027 2.4e-11 72.0 50 68.0
EL10Ac5g10864 Beta vulgaris HOM05D007939 ORTHO05D010027 3.1e-11 71.6 45 73.3
BolC3t18968H Brassica oleracea HOM05D007939 ORTHO05D010027 3.1e-11 71.6 45 77.8
Medtr4g107140 Medicago truncatula HOM05D007939 ORTHO05D010027 3.1e-11 71.6 45 73.3
Lsat_1_v5_gn_4_74421 Lactuca sativa HOM05D007939 ORTHO05D010027 4.1e-11 71.2 50 70.0
Sabra12G0052700 Salix brachista HOM05D007939 ORTHO05D010027 4.1e-11 71.2 45 75.6
SGA_v2.0_scaffold7G04104 Striga asiatica HOM05D007939 ORTHO05D010027 7.0e-11 70.5 44 75.0
unitig_21.g20455 Utricularia gibba HOM05D002627 ORTHO05D010027 7.0e-11 70.5 50 62.0
Sabra15G0093500 Salix brachista HOM05D007939 ORTHO05D010027 9.1e-11 70.1 45 73.3
EL10Ac5g11334 Beta vulgaris HOM05D007939 ORTHO05D010027 1.2e-10 69.7 45 71.1
Oeu046758.2 Olea europaea HOM05D007939 ORTHO05D010027 3.5e-10 68.2 45 71.1
ATR0712G037 Amborella trichopoda HOM05D007939 ORTHO05D010027 5.9e-10 67.4 40 77.5
Nitab4.5_0000642g0220 Nicotiana tabacum HOM05D007939 ORTHO05D010027 2.9e-09 65.1 45 66.7
Nitab4.5_0002875g0050 Nicotiana tabacum HOM05D007939 ORTHO05D010027 2.9e-09 65.1 45 66.7
Os03g0824500 Oryza sativa ssp. japonica HOM05D007939 ORTHO05D010027 5.0e-09 64.3 42 71.4
Zm00001eb151290 Zea mays HOM05D007939 ORTHO05D010027 6.5e-09 63.9 38 76.3
Zm00001eb123900 Zea mays HOM05D007939 ORTHO05D010027 1.1e-08 63.2 38 73.7
Zm00001eb302590 Zea mays HOM05D007939 ORTHO05D010027 2.5e-08 62.0 39 71.8
QL10p013938 Quercus lobata HOM05D007939 ORTHO05D010027 3.0e-06 55.1 44 63.6


User provided reference genes

Program Settings