Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g069700.4 Solanum lycopersicum HOM05D007763 ORTHO05D009537 6.4e-194 681.8 807 100.0
Sopen06g027000 Solanum pennellii HOM05D007763 ORTHO05D009537 1.4e-100 371.7 662 98.6
CAN.G587.9 Capsicum annuum HOM05D007763 ORTHO05D009537 1.1e-52 212.6 655 89.0
Nitab4.5_0003021g0070 Nicotiana tabacum HOM05D007763 ORTHO05D009537 3.5e-38 164.5 136 83.1
Peaxi162Scf00013g00410 Petunia axillaris HOM05D007763 ORTHO05D009537 4.5e-38 164.1 138 81.2
Nitab4.5_0004286g0010 Nicotiana tabacum HOM05D007763 ORTHO05D009537 1.7e-32 145.6 120 85.0
Migut.I00207 Erythranthe guttata HOM05D007763 ORTHO05D009537 2.2e-29 135.2 138 52.9
SGA_v2.0_scaffold25G10931 Striga asiatica HOM05D007763 ORTHO05D009537 2.5e-28 131.7 172 45.9
Dinv38739 Davidia involucrata HOM05D007763 ORTHO05D001128 1.6e-27 129.0 178 42.7
HanXRQChr08g0236691 Helianthus annuus HOM05D007763 ORTHO05D009537 2.1e-27 128.6 140 50.7
Hma1.2p1_0060F.1_g033520 Hydrangea macrophylla HOM05D007763 ORTHO05D009537 2.7e-27 128.3 157 48.4
Lsat_1_v5_gn_5_21540 Lactuca sativa HOM05D007763 ORTHO05D009537 5.2e-26 124.0 131 52.7
Cc04_g15160 Coffea canephora HOM05D007763 ORTHO05D009537 1.5e-25 122.5 136 48.5
MSTRG.11374 Avicennia marina HOM05D007763 ORTHO05D009537 1.3e-24 119.4 170 43.5
Lj9C466T13 Lonicera japonica HOM05D007763 ORTHO05D009537 2.8e-24 118.2 165 46.1
Thecc.03G093400 Theobroma cacao HOM05D007763 ORTHO05D009537 1.1e-23 116.3 130 48.5
RcHm_v2.0_Chr7g0181881 Rosa chinensis HOM05D007763 ORTHO05D009537 1.8e-23 115.5 141 48.9
Actinidia04871 Actinidia chinensis HOM05D007763 ORTHO05D009537 9.1e-23 113.2 152 42.1
Manes.14G081200 Manihot esculenta HOM05D007763 ORTHO05D009537 2.7e-22 111.7 163 42.3
Duzib205G0970 Durio zibethinus HOM05D007763 ORTHO05D009537 3.5e-22 111.3 130 46.2
CSS0022156 Camellia sinensis var. sinensis HOM05D007763 ORTHO05D009537 1.3e-21 109.4 152 43.4
Sc12g0006490 Simmondsia chinensis HOM05D007763 ORTHO05D009537 2.3e-21 108.6 158 42.4
Haze_07298 Corylus avellana HOM05D007763 ORTHO05D010304 3.8e-21 107.8 152 39.5
Rhsim08G0152400 Rhododendron simsii HOM05D000001 ORTHO05D010304 8.6e-21 106.7 129 45.0
AUR62021645 Chenopodium quinoa HOM05D007763 ORTHO05D009537 1.5e-20 105.9 124 44.4
FvH4_5g14610 Fragaria vesca HOM05D007763 ORTHO05D009537 2.5e-20 105.1 128 48.4
TAR622G0770 Trochodendron aralioides HOM05D007763 ORTHO05D009537 2.5e-20 105.1 138 44.9
Gorai.003G098200 Gossypium raimondii HOM05D007763 ORTHO05D009537 4.2e-20 104.4 118 44.9
PGR031G2821 Punica granatum HOM05D007763 ORTHO05D009537 4.2e-20 104.4 149 42.3
FAN13G0255 Fragaria x ananassa HOM05D007763 ORTHO05D009537 7.2e-20 103.6 127 47.2
FAN18G1924 Fragaria x ananassa HOM05D007763 ORTHO05D009537 7.2e-20 103.6 127 47.2
Gohir.D03G094100 Gossypium hirsutum HOM05D007763 ORTHO05D009537 1.6e-19 102.4 118 44.1
COL.COLO4_36930 Corchorus olitorius HOM05D007763 ORTHO05D009537 2.8e-19 101.7 155 41.3
GSVIVG01007974001 Vitis vinifera HOM05D007763 ORTHO05D010304 3.6e-19 101.3 144 42.4
Gohir.A03G067600 Gossypium hirsutum HOM05D007763 ORTHO05D009537 6.1e-19 100.5 132 43.9
Cfa018915 Carpinus fangiana HOM05D007763 ORTHO05D009537 8.0e-19 100.1 162 40.1
TWI60G1313 Tripterygium wilfordii HOM05D007763 ORTHO05D009537 1.0e-18 99.8 151 43.7
Atru.chr12.1670 Acer truncatum HOM05D007763 ORTHO05D009537 1.4e-18 99.4 124 44.4
Prupe.5G197300 Prunus persica HOM05D007763 ORTHO05D009537 2.3e-18 98.6 121 43.8
Ah.02g113700 Amaranthus hybridus HOM05D007763 ORTHO05D009537 4.0e-18 97.8 125 42.4
Ciclev10024595m.g Citrus clementina HOM05D007763 ORTHO05D009537 6.8e-18 97.1 166 37.3
Aqoxy3G00480 Aquilegia oxysepala HOM05D007763 ORTHO05D009537 1.2e-17 96.3 151 41.1
Carub.0008s2207 Capsella rubella HOM05D007763 ORTHO05D009537 9.8e-17 93.2 165 38.8
PSO017G0499 Papaver somniferum HOM05D007763 ORTHO05D009537 9.8e-17 93.2 152 41.4
QL10p017571 Quercus lobata HOM05D007763 ORTHO05D009537 1.3e-16 92.8 124 41.1
Nn2g12476 Nelumbo nucifera HOM05D007763 ORTHO05D009537 3.2e-15 88.2 146 37.7
EL10Ac5g11053 Beta vulgaris HOM05D014602 ORTHO05D009537 7.0e-15 87.0 80 56.2
ClCG09G020450 Citrullus lanatus HOM05D007763 ORTHO05D009537 7.0e-15 87.0 127 40.2
Oeu052450.2 Olea europaea HOM05D007763 ORTHO05D009537 1.6e-14 85.9 71 60.6
Sed0000161 Sechium edule HOM05D007763 ORTHO05D009537 2.0e-14 85.5 126 44.4
AL8G38070 Arabidopsis lyrata HOM05D007763 ORTHO05D009537 5.9e-14 84.0 146 39.0
Thhalv10005336m.g Eutrema salsugineum HOM05D007763 ORTHO05D009537 5.9e-14 84.0 151 39.1
THA.LOC104801471 Tarenaya hassleriana HOM05D007763 ORTHO05D009537 3.9e-13 81.3 118 43.2
MELO3C025502.2 Cucumis melo HOM05D007763 ORTHO05D009537 1.5e-12 79.3 173 32.9
AT5G61400 Arabidopsis thaliana HOM05D007763 ORTHO05D009537 2.5e-12 78.6 151 38.4
CARHR275160 Cardamine hirsuta HOM05D007763 ORTHO05D009537 3.3e-12 78.2 165 35.2
Phvul.009G185566 Phaseolus vulgaris HOM05D007763 ORTHO05D009537 5.6e-12 77.4 77 44.2
Atru.chr12.1664 Acer truncatum HOM05D007763 ORTHO05D009537 9.5e-12 76.6 73 49.3
Aa31LG11G2020 Aethionema arabicum HOM05D007763 ORTHO05D009537 4.7e-11 74.3 125 36.8
AUR62008445 Chenopodium quinoa HOM05D007763 ORTHO05D009537 4.7e-11 74.3 140 34.3
BcaC04g23450 Brassica carinata HOM05D007763 ORTHO05D009537 6.1e-11 73.9 133 39.1
C09p08190 Brassica napus HOM05D007763 ORTHO05D009537 6.1e-11 73.9 133 39.1
BolC9t53731H Brassica oleracea HOM05D007763 ORTHO05D009537 6.1e-11 73.9 133 39.1
CsaV3_5G025970 Cucumis sativus L. HOM05D007763 ORTHO05D009537 6.1e-11 73.9 173 30.6
DCAR_002300 Daucus carota HOM05D007763 ORTHO05D009537 6.1e-11 73.9 77 49.4
CDE04G3021 Ceratophyllum demersum HOM05D007763 ORTHO05D000003 8.0e-11 73.6 127 34.6
ECA246G2275 Erigeron canadensis HOM05D007763 ORTHO05D009537 1.0e-10 73.2 92 37.0
TPR.G27557 Trifolium pratense HOM05D007763 ORTHO05D009537 1.4e-10 72.8 74 41.9
BcaNung06902 Brassica carinata HOM05D007763 ORTHO05D009537 5.2e-10 70.9 165 35.8
BraA09t36381Z Brassica rapa HOM05D007763 ORTHO05D009537 5.2e-10 70.9 134 39.6
arahy.Tifrunner.gnm1.ann1.NWYI6Z Arachis hypogaea HOM05D000001 ORTHO05D010304 3.4e-09 68.2 74 41.9
Ca_14664_v3 Cicer arietinum L. HOM05D007763 ORTHO05D009537 7.5e-09 67.0 79 38.0
Atru.chr12.1659 Acer truncatum HOM05D007763 ORTHO05D009537 9.8e-09 66.6 75 45.3
arahy.Tifrunner.gnm1.ann1.PFL66H Arachis hypogaea HOM05D007763 ORTHO05D009537 1.7e-08 65.9 73 41.1
Lalb_Chr08g0235511 Lupinus albus HOM05D007763 ORTHO05D009537 8.3e-08 63.5 74 40.5
LjContig00102g0005353 Lotus japonicus HOM05D000001 ORTHO05D010304 1.4e-07 62.8 72 41.7
vmacro17568 Vaccinium macrocarpon HOM05D007763 ORTHO05D009537 1.9e-07 62.4 111 42.3
Medtr3g037490 Medicago truncatula HOM05D007763 ORTHO05D009537 6.0e-06 57.4 58 43.1
ATR1127G168 Amborella trichopoda HOM05D007763 ORTHO05D009537 7.8e-06 57.0 128 33.6


User provided reference genes

Program Settings