Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g069520.3 Solanum lycopersicum HOM05D006748 ORTHO05D008553 6.1e-58 227.3 114 100.0
Sopen06g026810 Solanum pennellii HOM05D006748 ORTHO05D008553 4.3e-51 204.5 101 100.0
Nitab4.5_0005160g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 2.7e-45 185.3 101 90.1
Nitab4.5_0011867g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 2.7e-45 185.3 101 90.1
Peaxi162Scf00702g00422 Petunia axillaris HOM05D006748 ORTHO05D008553 7.8e-45 183.7 101 89.1
SGA_v2.0_scaffold49G18162 Striga asiatica HOM05D006748 ORTHO05D008553 7.3e-43 177.2 101 84.2
Oeu008258.1 Olea europaea HOM05D006748 ORTHO05D008553 2.8e-42 175.3 101 83.2
unitig_750.g28509 Utricularia gibba HOM05D006748 ORTHO05D008553 1.8e-41 172.6 102 82.4
MSTRG.22979 Avicennia marina HOM05D006748 ORTHO05D008553 2.6e-40 168.7 101 82.2
Migut.I00325 Erythranthe guttata HOM05D006748 ORTHO05D008553 2.6e-40 168.7 107 79.4
Cc10_g05660 Coffea canephora HOM05D006748 ORTHO05D008553 1.1e-38 163.3 104 80.8
THA.LOC104818341 Tarenaya hassleriana HOM05D006748 ORTHO05D008553 7.1e-38 160.6 104 76.0
Carub.0006s0686 Capsella rubella HOM05D006748 ORTHO05D008553 9.2e-38 160.2 97 81.4
AT5G07960 Arabidopsis thaliana HOM05D006748 ORTHO05D008553 3.5e-37 158.3 100 79.0
CARHR205230 Cardamine hirsuta HOM05D006748 ORTHO05D008553 3.5e-37 158.3 100 79.0
Sp6g34980 Schrenkiella parvula HOM05D006748 ORTHO05D008553 3.5e-37 158.3 100 79.0
AL6G18300 Arabidopsis lyrata HOM05D006748 ORTHO05D008553 4.6e-37 157.9 100 79.0
BcaC06g32512 Brassica carinata HOM05D006748 ORTHO05D008553 4.6e-37 157.9 99 78.8
Thhalv10015079m.g Eutrema salsugineum HOM05D006748 ORTHO05D008553 4.6e-37 157.9 100 78.0
BcaC03g13204 Brassica carinata HOM05D006748 ORTHO05D008553 1.3e-36 156.4 101 77.2
C02p03380 Brassica napus HOM05D006748 ORTHO05D008553 1.3e-36 156.4 101 77.2
C09p68960 Brassica napus HOM05D006748 ORTHO05D008553 1.3e-36 156.4 99 77.8
BolC2t06300H Brassica oleracea HOM05D006748 ORTHO05D008553 1.3e-36 156.4 101 77.2
BraA02t04939Z Brassica rapa HOM05D006748 ORTHO05D008553 1.3e-36 156.4 100 78.0
BcaB05g21592 Brassica carinata HOM05D006748 ORTHO05D008553 1.7e-36 156.0 97 79.4
BolC9t59641H Brassica oleracea HOM05D006748 ORTHO05D008553 3.0e-36 155.2 99 77.8
Hma1.2p1_0060F.1_g033230 Hydrangea macrophylla HOM05D006748 ORTHO05D008553 3.0e-36 155.2 99 79.8
PSO541G5074 Papaver somniferum HOM05D006748 ORTHO05D008553 6.6e-36 154.1 99 75.8
PSO675G4773 Papaver somniferum HOM05D006748 ORTHO05D008553 6.6e-36 154.1 99 75.8
Aa31LG3G18570 Aethionema arabicum HOM05D006748 ORTHO05D008553 1.1e-35 153.3 100 77.0
Atru.chr9.414 Acer truncatum HOM05D006748 ORTHO05D008553 2.5e-35 152.1 100 74.0
CANSAT80G2841 Cannabis sativa HOM05D006748 ORTHO05D008553 7.3e-35 150.6 100 73.0
TAR622G0828 Trochodendron aralioides HOM05D006748 ORTHO05D008553 9.5e-35 150.2 99 72.7
MD06G1200600 Malus domestica HOM05D006748 ORTHO05D008553 1.2e-34 149.8 101 71.3
GSVIVG01007891001 Vitis vinifera HOM05D006748 ORTHO05D008553 1.2e-34 149.8 96 79.2
Lalb_Chr09g0334301 Lupinus albus HOM05D006748 ORTHO05D008553 2.8e-34 148.7 101 70.3
MD14G1210100 Malus domestica HOM05D006748 ORTHO05D008553 2.8e-34 148.7 101 72.3
Nn3g17423 Nelumbo nucifera HOM05D006748 ORTHO05D008553 2.8e-34 148.7 92 80.4
CSS0043022 Camellia sinensis var. sinensis HOM05D006748 ORTHO05D008553 4.7e-34 147.9 92 81.5
Dinv10524 Davidia involucrata HOM05D006748 ORTHO05D008553 4.7e-34 147.9 99 75.8
ClCG06G015720 Citrullus lanatus HOM05D006748 ORTHO05D008553 6.2e-34 147.5 100 74.0
Duzib084G0059 Durio zibethinus HOM05D006748 ORTHO05D008553 6.2e-34 147.5 99 72.7
Gohir.A12G181700 Gossypium hirsutum HOM05D006748 ORTHO05D008553 6.2e-34 147.5 99 73.7
Gohir.D12G184500 Gossypium hirsutum HOM05D006748 ORTHO05D008553 6.2e-34 147.5 99 73.7
Gorai.008G197900 Gossypium raimondii HOM05D006748 ORTHO05D008553 6.2e-34 147.5 99 73.7
Manes.06G086100 Manihot esculenta HOM05D006748 ORTHO05D008553 8.1e-34 147.1 92 78.3
Sed0010236 Sechium edule HOM05D006748 ORTHO05D008553 8.1e-34 147.1 100 73.0
Thecc.03G099400 Theobroma cacao HOM05D006748 ORTHO05D008553 8.1e-34 147.1 99 72.7
Actinidia35032 Actinidia chinensis HOM05D006748 ORTHO05D008553 1.1e-33 146.7 99 74.7
Eucgr.K02517 Eucalyptus grandis HOM05D006748 ORTHO05D008553 1.1e-33 146.7 92 78.3
PGR044G1724 Punica granatum HOM05D006748 ORTHO05D008553 1.1e-33 146.7 97 74.2
Hund09880 Selenicereus undatus HOM05D006748 ORTHO05D008553 1.1e-33 146.7 88 80.7
Ciclev10023002m.g Citrus clementina HOM05D006748 ORTHO05D008553 1.8e-33 146.0 96 75.0
Potri.015G056300 Populus trichocarpa HOM05D006748 ORTHO05D008553 1.8e-33 146.0 99 73.7
CiPaw.12G007800 Carya illinoinensis HOM05D006748 ORTHO05D008553 5.2e-33 144.4 99 73.7
Hund02598 Selenicereus undatus HOM05D006748 ORTHO05D008553 5.2e-33 144.4 94 76.6
SGA_v2.0_scaffold25G10944 Striga asiatica HOM05D006748 ORTHO05D008553 5.2e-33 144.4 82 85.4
EL10Ac5g11112 Beta vulgaris HOM05D006748 ORTHO05D008553 6.8e-33 144.1 101 73.3
Ca_18978_v3 Cicer arietinum L. HOM05D006748 ORTHO05D008553 6.8e-33 144.1 101 71.3
CsaV3_1G002810 Cucumis sativus L. HOM05D006748 ORTHO05D008553 8.9e-33 143.7 100 72.0
Psat5g203080 Pisum sativum HOM05D006748 ORTHO05D008553 1.2e-32 143.3 101 70.3
TPR.G12215 Trifolium pratense HOM05D006748 ORTHO05D008553 1.5e-32 142.9 101 70.3
Cpa.g.sc94.24 Carica papaya HOM05D006748 ORTHO05D008553 2.0e-32 142.5 92 75.0
Medtr3g024170 Medicago truncatula HOM05D006748 ORTHO05D008553 2.0e-32 142.5 101 70.3
Medtr3g024190 Medicago truncatula HOM05D006748 ORTHO05D008553 2.0e-32 142.5 101 70.3
Cfa019312 Carpinus fangiana HOM05D006748 ORTHO05D008553 3.4e-32 141.7 99 69.7
Lj1g0012744 Lotus japonicus HOM05D006748 ORTHO05D008553 3.4e-32 141.7 101 70.3
Phvul.009G193300 Phaseolus vulgaris HOM05D006748 ORTHO05D008553 3.4e-32 141.7 101 70.3
HPP92_019473 Vanilla planifolia HOM05D006748 ORTHO05D008553 3.4e-32 141.7 91 73.6
Zm00001eb057720 Zea mays HOM05D006748 ORTHO05D008553 3.4e-32 141.7 108 63.0
SHI30118 Sapria himalayana HOM05D006748 ORTHO05D008553 4.4e-32 141.4 90 75.6
TWI81G0385 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 4.4e-32 141.4 98 69.4
ECA247G1600 Erigeron canadensis HOM05D006748 ORTHO05D008553 5.8e-32 141.0 101 68.3
Os03g0756800 Oryza sativa ssp. japonica HOM05D006748 ORTHO05D008553 5.8e-32 141.0 96 67.7
Haze_07696 Corylus avellana HOM05D006748 ORTHO05D008553 7.6e-32 140.6 99 69.7
RcHm_v2.0_Chr7g0182761 Rosa chinensis HOM05D006748 ORTHO05D008553 7.6e-32 140.6 98 67.3
Glyma.06G201800 Glycine max HOM05D006748 ORTHO05D008553 1.3e-31 139.8 101 69.3
HanXRQChr02g0044721 Helianthus annuus HOM05D006748 ORTHO05D008553 1.7e-31 139.4 101 70.3
Potri.012G065500 Populus trichocarpa HOM05D006748 ORTHO05D008553 2.2e-31 139.0 89 75.3
TWI60G0647 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 3.8e-31 138.3 99 69.7
FAN13G1579 Fragaria x ananassa HOM05D006748 ORTHO05D008553 4.9e-31 137.9 92 72.8
FvH4_5g14060 Fragaria vesca HOM05D006748 ORTHO05D008553 8.4e-31 137.1 92 71.7
FvH4_5g14160 Fragaria vesca HOM05D006748 ORTHO05D008553 1.4e-30 136.3 92 71.7
QL10p019141 Quercus lobata HOM05D006748 ORTHO05D008553 2.4e-30 135.6 99 68.7
Lalb_Chr16g0391551 Lupinus albus HOM05D006748 ORTHO05D008553 3.2e-30 135.2 93 71.0
Sed0016176 Sechium edule HOM05D006748 ORTHO05D008553 9.2e-30 133.7 100 66.0
Lsat_1_v5_gn_1_13560 Lactuca sativa HOM05D006748 ORTHO05D008553 1.2e-29 133.3 98 67.3
Sc12g0006600 Simmondsia chinensis HOM05D006748 ORTHO05D008553 3.5e-29 131.7 78 83.3
Lj5A105G56 Lonicera japonica HOM05D006748 ORTHO05D008553 3.0e-28 128.6 99 65.7
vmacro16507 Vaccinium macrocarpon HOM05D006748 ORTHO05D008553 1.2e-26 123.2 80 75.0
Actinidia19003 Actinidia chinensis HOM05D006748 ORTHO05D008553 2.1e-26 122.5 80 77.5
Manes.14G084550 Manihot esculenta HOM05D006748 ORTHO05D008553 3.6e-26 121.7 80 75.0
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 4.7e-26 121.3 80 73.8
Rhsim12G0151700 Rhododendron simsii HOM05D006748 ORTHO05D008553 4.7e-26 121.3 79 75.9
VMungo1309G2295 Vigna mungo HOM05D006748 ORTHO05D008553 8.1e-26 120.6 81 74.1
HPP92_006054 Vanilla planifolia HOM05D006748 ORTHO05D008553 1.8e-25 119.4 91 62.6
QL09p026979 Quercus lobata HOM05D006748 ORTHO05D008553 6.9e-25 117.5 131 51.1
arahy.Tifrunner.gnm1.ann1.HPW464 Arachis hypogaea HOM05D006748 ORTHO05D008553 7.6e-24 114.0 80 71.2
AUR62008510 Chenopodium quinoa HOM05D006748 ORTHO05D008553 7.6e-24 114.0 82 70.7
SMO201G0125 Selaginella moellendorffii HOM05D006748 ORTHO05D008553 2.9e-23 112.1 87 63.2
AUR62021580 Chenopodium quinoa HOM05D006748 ORTHO05D008553 6.4e-23 110.9 77 72.7
CDE05G0122 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 1.4e-22 109.8 89 65.2
ATR0064G062 Amborella trichopoda HOM05D006748 ORTHO05D008553 2.7e-21 105.5 74 67.6
Mapoly0019s0070 Marchantia polymorpha HOM05D006748 ORTHO05D008553 3.0e-20 102.1 87 57.5
Sabra15G0081500 Salix brachista HOM05D006748 ORTHO05D008553 5.1e-20 101.3 81 64.2
HanXRQChr16g0510351 Helianthus annuus HOM05D006748 ORTHO05D008553 5.6e-19 97.8 71 69.0
CBR_g90015 Chara braunii HOM05D006748 ORTHO05D008553 7.3e-19 97.4 91 48.4
Pp3c14_26790 Physcomitrium patens HOM05D006748 ORTHO05D008553 1.6e-18 96.3 95 50.5
BraA10t44914Z Brassica rapa HOM05D006748 ORTHO05D008553 2.1e-18 95.9 57 80.7
A10p28650 Brassica napus HOM05D006748 ORTHO05D008553 2.4e-17 92.4 82 58.5
AagrBONN_evm.TU.Sc2ySwM_117.1931 Anthoceros agrestis HOM05D006748 ORTHO05D008553 7.6e-16 87.4 72 58.3
MELO3C017217.2 Cucumis melo HOM05D006748 ORTHO05D008553 1.1e-14 83.6 54 75.9
HanXRQChr14g0449601 Helianthus annuus HOM05D006748 ORTHO05D008553 6.2e-10 67.8 57 63.2
COL.COLO4_37587 Corchorus olitorius HOM05D006748 ORTHO05D008553 1.4e-09 66.6 46 71.7
SEGI_29622 Sequoiadendron giganteum HOM05D006748 ORTHO05D008553 5.8e-08 61.2 45 66.7
CDE02G4382 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 2.9e-07 58.9 45 64.4


User provided reference genes

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