Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g068853.1 Solanum lycopersicum HOM05D000475 ORTHO05D000343 3.5e-70 268.1 127 100.0
Sopen06g026120 Solanum pennellii HOM05D000475 ORTHO05D000343 5.8e-33 144.4 80 83.8
Solyc06g068850.4 Solanum lycopersicum HOM05D000475 ORTHO05D000343 1.2e-30 136.7 80 78.8
Nitab4.5_0001841g0060 Nicotiana tabacum HOM05D000475 ORTHO05D000343 8.7e-21 104.0 79 64.6
Nitab4.5_0005097g0060 Nicotiana tabacum HOM05D000475 ORTHO05D000343 3.4e-17 92.0 79 57.0
Peaxi162Scf00207g00142 Petunia axillaris HOM05D000475 ORTHO05D000343 7.9e-14 80.9 87 48.3
CAN.G1089.26 Capsicum annuum HOM05D000475 ORTHO05D000343 3.1e-10 68.9 42 66.7
SGA_v2.0_scaffold40G15627 Striga asiatica HOM05D000475 ORTHO05D000343 4.5e-09 65.1 48 54.2
arahy.Tifrunner.gnm1.ann1.79XQVK Arachis hypogaea HOM05D000475 ORTHO05D000343 2.2e-08 62.8 51 49.0
arahy.Tifrunner.gnm1.ann1.QM61S2 Arachis hypogaea HOM05D000475 ORTHO05D000343 2.2e-08 62.8 51 49.0
TAR622G0630 Trochodendron aralioides HOM05D000475 ORTHO05D000343 1.4e-07 60.1 45 55.6
Dinv23224 Davidia involucrata HOM05D000475 ORTHO05D000343 2.5e-07 59.3 47 51.1
Thecc.03G140500 Theobroma cacao HOM05D000475 ORTHO05D000343 2.5e-07 59.3 56 48.2
MSTRG.11226 Avicennia marina HOM05D000475 ORTHO05D000343 4.2e-07 58.5 53 47.2
EL10Ac6g13406 Beta vulgaris HOM05D000475 ORTHO05D000343 4.2e-07 58.5 57 45.6
Lalb_Chr11g0069171 Lupinus albus HOM05D000475 ORTHO05D000343 4.2e-07 58.5 42 57.1
Oeu028936.1 Olea europaea HOM05D000475 ORTHO05D000343 4.2e-07 58.5 50 48.0
Migut.I00619 Erythranthe guttata HOM05D000475 ORTHO05D000343 5.5e-07 58.2 60 43.3
COL.COLO4_37256 Corchorus olitorius HOM05D000475 ORTHO05D000343 9.4e-07 57.4 41 58.5
Manes.14G044900 Manihot esculenta HOM05D000475 ORTHO05D000343 9.4e-07 57.4 49 49.0
MD00G1177300 Malus domestica HOM05D000475 ORTHO05D000343 1.2e-06 57.0 49 51.0
RcHm_v2.0_Chr7g0188711 Rosa chinensis HOM05D000475 ORTHO05D000343 1.2e-06 57.0 40 57.5
SEGI_36381 Sequoiadendron giganteum HOM05D000475 ORTHO05D000343 1.2e-06 57.0 52 42.3
TAR374G0817 Trochodendron aralioides HOM05D000475 ORTHO05D000343 1.2e-06 57.0 45 53.3
Gohir.D09G248800 Gossypium hirsutum HOM05D000475 ORTHO05D000343 1.6e-06 56.6 47 51.1
Gorai.006G273200 Gossypium raimondii HOM05D000475 ORTHO05D000343 1.6e-06 56.6 47 51.1
Dinv11294 Davidia involucrata HOM05D000475 ORTHO05D000343 2.7e-06 55.8 55 43.6
Dinv11296 Davidia involucrata HOM05D000475 ORTHO05D000343 2.7e-06 55.8 55 43.6
Hma1.2p1_0577F.1_g182270 Hydrangea macrophylla HOM05D000475 ORTHO05D000343 2.7e-06 55.8 47 48.9
SEGI_22052 Sequoiadendron giganteum HOM05D000475 ORTHO05D000343 2.7e-06 55.8 64 35.9
Glyma.04G201400 Glycine max HOM05D000475 ORTHO05D000343 4.7e-06 55.1 50 46.0
MD14G1147400 Malus domestica HOM05D000475 ORTHO05D000343 7.9e-06 54.3 62 40.3
Prupe.1G215000 Prunus persica HOM05D000475 ORTHO05D000343 7.9e-06 54.3 47 51.1


User provided reference genes

Program Settings