Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g068760.3 Solanum lycopersicum HOM05D001551 ORTHO05D005859 4.0e-164 581.3 275 100.0
Sopen06g026040 Solanum pennellii HOM05D001551 ORTHO05D005859 1.0e-162 576.6 276 99.6
PGSC0003DMG400025575 Solanum tuberosum HOM05D001551 ORTHO05D005859 2.5e-161 572.0 276 98.6
CAN.G1089.16 Capsicum annuum HOM05D001551 ORTHO05D005859 7.6e-155 550.4 276 94.6
Nitab4.5_0007345g0100 Nicotiana tabacum HOM05D001551 ORTHO05D005859 1.9e-150 535.8 276 92.4
Nitab4.5_0012775g0030 Nicotiana tabacum HOM05D001551 ORTHO05D005859 4.3e-150 534.6 276 92.0
Peaxi162Scf00207g00254 Petunia axillaris HOM05D001551 ORTHO05D005859 1.3e-138 496.5 278 88.1
Hma1.2p1_0577F.1_g182180 Hydrangea macrophylla HOM05D001551 ORTHO05D005859 2.3e-135 485.7 255 86.7
CSS0038575 Camellia sinensis var. sinensis HOM05D001551 ORTHO05D005859 3.0e-135 485.3 267 83.1
CSS0002484 Camellia sinensis var. sinensis HOM05D001551 ORTHO05D005859 3.9e-135 485.0 267 83.1
Cc04_g05770 Coffea canephora HOM05D001551 ORTHO05D005859 3.9e-135 485.0 264 82.2
Rhsim12G0181300 Rhododendron simsii HOM05D001551 ORTHO05D005859 5.1e-135 484.6 269 82.5
Thecc.03G141800 Theobroma cacao HOM05D001551 ORTHO05D005859 5.1e-135 484.6 269 82.9
Duzib205G1491 Durio zibethinus HOM05D001551 ORTHO05D005859 1.1e-134 483.4 269 83.3
MSTRG.22814 Avicennia marina HOM05D001551 ORTHO05D005859 4.4e-134 481.5 275 80.7
SalBow7G1162 Salvia bowleyana HOM05D001551 ORTHO05D005859 9.7e-134 480.3 275 81.8
COL.COLO4_37269 Corchorus olitorius HOM05D001551 ORTHO05D005859 6.3e-133 477.6 268 81.7
Actinidia08913 Actinidia chinensis HOM05D001551 ORTHO05D005859 1.4e-132 476.5 266 81.2
Lsat_1_v5_gn_5_9381 Lactuca sativa HOM05D001551 ORTHO05D005859 1.5e-131 473.0 264 82.6
Lj9C488G12 Lonicera japonica HOM05D001551 ORTHO05D005859 2.6e-131 472.2 259 82.6
vmacro16761 Vaccinium macrocarpon HOM05D001551 ORTHO05D005859 2.9e-130 468.8 274 79.6
Gohir.A11G038800 Gossypium hirsutum HOM05D001551 ORTHO05D005859 3.8e-130 468.4 268 81.3
Migut.I00664 Erythranthe guttata HOM05D001551 ORTHO05D005859 5.0e-130 468.0 275 79.6
Gohir.D11G042000 Gossypium hirsutum HOM05D001551 ORTHO05D005859 1.1e-129 466.8 262 81.7
TAR629G2635 Trochodendron aralioides HOM05D001551 ORTHO05D005859 1.5e-129 466.5 259 81.9
Glyma.04G202400 Glycine max HOM05D001551 ORTHO05D005859 1.9e-129 466.1 262 81.3
Lj1g0018460 Lotus japonicus HOM05D001551 ORTHO05D005859 3.2e-129 465.3 264 80.3
Potri.012G109800 Populus trichocarpa HOM05D001551 ORTHO05D005859 1.2e-128 463.4 270 80.0
Gorai.007G045200 Gossypium raimondii HOM05D001551 ORTHO05D005859 2.1e-128 462.6 263 81.4
TWI23G1313 Tripterygium wilfordii HOM05D001551 ORTHO05D005859 2.7e-128 462.2 270 80.0
Glyma.06G163100 Glycine max HOM05D001551 ORTHO05D005859 8.0e-128 460.7 267 79.0
Sabra12G0080000 Salix brachista HOM05D001551 ORTHO05D005859 8.0e-128 460.7 276 78.6
TAR371G0091 Trochodendron aralioides HOM05D001551 ORTHO05D005859 1.8e-127 459.5 258 82.6
GSVIVG01008663001 Vitis vinifera HOM05D001551 ORTHO05D005859 3.0e-127 458.8 269 78.8
Atru.chr6.1937 Acer truncatum HOM05D001551 ORTHO05D005859 3.9e-127 458.4 261 80.5
Cpa.g.sc2215.3 Carica papaya HOM05D001551 ORTHO05D005859 6.7e-127 457.6 268 78.4
Gohir.A03G055800 Gossypium hirsutum HOM05D001551 ORTHO05D005859 6.7e-127 457.6 259 81.9
Phvul.009G160500 Phaseolus vulgaris HOM05D001551 ORTHO05D005859 8.8e-127 457.2 262 78.2
Ca_10874_v3 Cicer arietinum L. HOM05D001551 ORTHO05D005859 1.1e-126 456.8 259 79.5
HanXRQChr05g0155371 Helianthus annuus HOM05D001551 ORTHO05D005859 1.1e-126 456.8 262 81.3
Aqoxy5G03068 Aquilegia oxysepala HOM05D001551 ORTHO05D005859 1.5e-126 456.4 262 79.0
Actinidia36846 Actinidia chinensis HOM05D001551 ORTHO05D005859 2.0e-126 456.1 275 77.5
Medtr3g098510 Medicago truncatula HOM05D001551 ORTHO05D005859 2.6e-126 455.7 265 77.4
Gorai.003G117100 Gossypium raimondii HOM05D001551 ORTHO05D005859 4.4e-126 454.9 267 79.8
arahy.Tifrunner.gnm1.ann1.D8JD58 Arachis hypogaea HOM05D001551 ORTHO05D005859 7.4e-126 454.1 268 77.2
arahy.Tifrunner.gnm1.ann1.Q2CTBB Arachis hypogaea HOM05D001551 ORTHO05D005859 7.4e-126 454.1 268 77.2
Manes.14G043800 Manihot esculenta HOM05D001551 ORTHO05D005859 9.7e-126 453.8 259 80.3
RcHm_v2.0_Chr7g0188531 Rosa chinensis HOM05D001551 ORTHO05D005859 9.7e-126 453.8 276 77.2
QL10p000300 Quercus lobata HOM05D001551 ORTHO05D005859 3.7e-125 451.8 253 80.2
MD06G1129000 Malus domestica HOM05D001551 ORTHO05D005859 6.3e-125 451.1 276 77.5
MD14G1145900 Malus domestica HOM05D001551 ORTHO05D005859 6.3e-125 451.1 276 77.2
PSO017G1738 Papaver somniferum HOM05D001551 ORTHO05D005859 1.1e-124 450.3 259 80.3
Ciclev10032408m.g Citrus clementina HOM05D001551 ORTHO05D005859 4.1e-124 448.4 270 78.1
Prupe.5G140300 Prunus persica HOM05D001551 ORTHO05D005859 4.1e-124 448.4 276 76.8
PSO478G5149 Papaver somniferum HOM05D001551 ORTHO05D005859 5.3e-124 448.0 259 79.9
Rhsim08G0198700 Rhododendron simsii HOM05D001551 ORTHO05D005859 5.3e-124 448.0 249 81.5
Lalb_Chr08g0237601 Lupinus albus HOM05D001551 ORTHO05D005859 7.0e-124 447.6 259 77.2
Cfa018920 Carpinus fangiana HOM05D001551 ORTHO05D005859 4.5e-123 444.9 254 79.5
MELO3C002387.2 Cucumis melo HOM05D001551 ORTHO05D005859 6.5e-122 441.0 266 74.1
Oeu051186.2 Olea europaea HOM05D001551 ORTHO05D005859 6.5e-122 441.0 292 72.3
BcaNung03998 Brassica carinata HOM05D001551 ORTHO05D005859 8.5e-122 440.7 271 76.0
BraA01t01589Z Brassica rapa HOM05D001551 ORTHO05D005859 1.5e-121 439.9 271 76.0
Cfa018698 Carpinus fangiana HOM05D001551 ORTHO05D005859 1.5e-121 439.9 254 79.1
unitig_27.g25103 Utricularia gibba HOM05D001551 ORTHO05D005859 1.5e-121 439.9 275 73.8
FAN04G0171 Fragaria x ananassa HOM05D001551 ORTHO05D005859 1.9e-121 439.5 280 75.7
CsaV3_1G009930 Cucumis sativus L. HOM05D001551 ORTHO05D005859 2.5e-121 439.1 266 73.7
FvH4_5g09710 Fragaria vesca HOM05D001551 ORTHO05D005859 2.5e-121 439.1 280 75.7
Psat5g055440 Pisum sativum HOM05D001551 ORTHO05D005859 3.2e-121 438.7 259 75.7
A01p16340 Brassica napus HOM05D001551 ORTHO05D005859 4.2e-121 438.3 271 75.6
FAN13G0525 Fragaria x ananassa HOM05D001551 ORTHO05D005859 5.5e-121 438.0 280 75.0
C01p20490 Brassica napus HOM05D001551 ORTHO05D005859 9.4e-121 437.2 271 75.3
CiPaw.12G000400 Carya illinoinensis HOM05D001551 ORTHO05D005859 9.4e-121 437.2 253 77.9
BcaC09g50811 Brassica carinata HOM05D001551 ORTHO05D005859 1.2e-120 436.8 270 75.2
FAN08G3006 Fragaria x ananassa HOM05D001551 ORTHO05D005859 1.2e-120 436.8 257 79.0
FAN18G2118 Fragaria x ananassa HOM05D001551 ORTHO05D005859 1.2e-120 436.8 280 75.4
Sc04g0000180 Simmondsia chinensis HOM05D001551 ORTHO05D005859 4.7e-120 434.9 277 74.4
Aa31LG3G7480 Aethionema arabicum HOM05D001551 ORTHO05D005859 8.0e-120 434.1 271 75.3
Sed0027340 Sechium edule HOM05D001551 ORTHO05D005859 2.3e-119 432.6 255 75.7
Eucgr.K02189 Eucalyptus grandis HOM05D001551 ORTHO05D005859 5.2e-119 431.4 262 76.0
vmacro19115 Vaccinium macrocarpon HOM05D001551 ORTHO05D005859 5.2e-119 431.4 249 79.5
AT5G51020 Arabidopsis thaliana HOM05D001551 ORTHO05D005859 6.8e-119 431.0 270 74.8
BolC1t01980H Brassica oleracea HOM05D001551 ORTHO05D005859 6.8e-119 431.0 271 74.2
PGR044G0460 Punica granatum HOM05D001551 ORTHO05D005859 6.8e-119 431.0 261 77.0
DCAR_025640 Daucus carota HOM05D001551 ORTHO05D005859 1.2e-118 430.3 275 73.5
Manes.06G127400 Manihot esculenta HOM05D001551 ORTHO05D005859 1.5e-118 429.9 259 78.0
AL8G25230 Arabidopsis lyrata HOM05D001551 ORTHO05D005859 2.0e-118 429.5 270 74.4
EL10Ac5g11272 Beta vulgaris HOM05D001551 ORTHO05D005859 3.4e-118 428.7 265 74.3
Sp6g13170 Schrenkiella parvula HOM05D001551 ORTHO05D005859 9.8e-118 427.2 276 73.2
Gohir.D03G110700 Gossypium hirsutum HOM05D001551 ORTHO05D005859 1.3e-117 426.8 240 81.7
SGA_v2.0_scaffold5G02806 Striga asiatica HOM05D001551 ORTHO05D005859 1.3e-117 426.8 279 73.1
Carub.0008s1102 Capsella rubella HOM05D001551 ORTHO05D005859 2.8e-117 425.6 268 74.6
CARHR257170 Cardamine hirsuta HOM05D001551 ORTHO05D005859 2.8e-117 425.6 270 74.1
CDE02G1325 Ceratophyllum demersum HOM05D001551 ORTHO05D005859 2.4e-116 422.5 258 74.8
AUR62043378 Chenopodium quinoa HOM05D001551 ORTHO05D005859 2.4e-116 422.5 285 69.8
BraA03t10931Z Brassica rapa HOM05D001551 ORTHO05D005859 3.1e-116 422.2 275 72.0
Haze_07303 Corylus avellana HOM05D006543 ORTHO05D008308 3.1e-116 422.2 266 73.3
THA.LOC104808046 Tarenaya hassleriana HOM05D001551 ORTHO05D005859 7.0e-116 421.0 257 76.3
AUR62032208 Chenopodium quinoa HOM05D001551 ORTHO05D005859 1.2e-115 420.2 283 70.3
Sp7g23070 Schrenkiella parvula HOM05D001551 ORTHO05D005859 3.5e-115 418.7 271 73.1
Hund10026 Selenicereus undatus HOM05D001551 ORTHO05D005859 1.0e-114 417.2 254 75.2
Sed0019000 Sechium edule HOM05D001551 ORTHO05D005859 1.3e-114 416.8 268 71.3
TWI39G0428 Tripterygium wilfordii HOM05D001551 ORTHO05D005859 4.2e-113 411.8 268 72.8
SGA_v2.0_scaffold37G14673 Striga asiatica HOM05D001551 ORTHO05D005859 1.0e-111 407.1 230 82.2
A03p16410 Brassica napus HOM05D001551 ORTHO05D005859 1.8e-111 406.4 300 66.0
Actinidia18288 Actinidia chinensis HOM05D001551 ORTHO05D005859 2.3e-111 406.0 267 71.5
Dinv13710 Davidia involucrata HOM05D001551 ORTHO05D005859 6.8e-111 404.4 209 85.6
THA.LOC104811554 Tarenaya hassleriana HOM05D001551 ORTHO05D005859 4.4e-110 401.7 246 75.2
MBI07_g13940_MAGBIO Magnolia biondii HOM05D001551 ORTHO05D005859 1.1e-108 397.1 295 67.1
BcaC01g06112 Brassica carinata HOM05D001551 ORTHO05D005859 3.1e-108 395.6 279 69.9
Os11g0524300 Oryza sativa ssp. japonica HOM05D001551 ORTHO05D005859 4.1e-108 395.2 231 74.0
Zm00001eb170550 Zea mays HOM05D001551 ORTHO05D005859 2.8e-104 382.5 231 71.4
ClCG03G004050 Citrullus lanatus HOM05D001551 ORTHO05D005859 1.0e-103 380.6 223 76.2
Thhalv10014437m.g Eutrema salsugineum HOM05D001551 ORTHO05D005859 1.5e-102 376.7 217 79.3
Actinidia25511 Actinidia chinensis HOM05D001551 ORTHO05D005859 2.9e-101 372.5 221 77.8
AagrBONN_evm.TU.Sc2ySwM_368.1985 Anthoceros agrestis HOM05D001551 ORTHO05D005859 4.1e-100 368.6 227 69.6
Mapoly0002s0145 Marchantia polymorpha HOM05D001551 ORTHO05D005859 1.3e-98 363.6 238 68.5
Pp3c5_10130 Physcomitrium patens HOM05D001551 ORTHO05D005859 1.1e-97 360.5 222 68.5
Pp3c6_23000 Physcomitrium patens HOM05D001551 ORTHO05D005859 1.6e-96 356.7 220 69.5
SMO118G0459 Selaginella moellendorffii HOM05D001551 ORTHO05D005859 3.6e-96 355.5 222 68.9
Nn4g22121 Nelumbo nucifera HOM05D001551 ORTHO05D005859 2.0e-94 349.7 263 65.4
AUR62011939 Chenopodium quinoa HOM05D001551 ORTHO05D005859 7.5e-94 347.8 286 60.5
TPR.G16934 Trifolium pratense HOM05D001551 ORTHO05D005859 3.7e-93 345.5 192 80.2
AUR62043863 Chenopodium quinoa HOM05D001551 ORTHO05D005859 1.1e-89 334.0 332 53.3
Hund02515 Selenicereus undatus HOM05D001551 ORTHO05D005859 1.8e-87 326.6 279 60.9
Haze_07088 Corylus avellana HOM05D001551 ORTHO05D005859 2.6e-86 322.8 232 65.9
Nn3g16260 Nelumbo nucifera HOM05D001551 ORTHO05D005859 5.8e-86 321.6 164 86.0
Dinv23235 Davidia involucrata HOM05D001551 ORTHO05D005859 9.8e-86 320.9 180 81.7
CBR_g30803 Chara braunii HOM05D001551 ORTHO05D005859 1.9e-81 306.6 223 59.6
SEGI_34423 Sequoiadendron giganteum HOM05D001551 ORTHO05D005859 4.7e-80 302.0 198 66.2
Duzib084G0881 Durio zibethinus HOM05D001551 ORTHO05D005859 2.1e-75 286.6 162 80.9
MBI07_g35983_MAGBIO Magnolia biondii HOM05D001551 ORTHO05D005859 5.4e-68 261.9 163 75.5
Thhalv10025970m.g Eutrema salsugineum HOM05D001551 ORTHO05D005859 7.1e-68 261.5 156 76.3
MBI07_g48061_MAGBIO Magnolia biondii HOM05D001551 ORTHO05D005859 1.5e-65 253.8 138 81.2
HPP92_009738 Vanilla planifolia HOM05D001551 ORTHO05D005859 5.8e-62 241.9 223 57.8
CDE06G0746 Ceratophyllum demersum HOM05D001551 ORTHO05D005859 1.7e-61 240.4 212 59.4
Sc04g0000140 Simmondsia chinensis HOM05D001551 ORTHO05D005859 9.3e-52 208.0 125 76.8
Sc04g0000130 Simmondsia chinensis HOM05D001551 ORTHO05D005859 5.1e-50 202.2 121 76.9
CSS0038626 Camellia sinensis var. sinensis HOM05D001551 ORTHO05D005859 1.6e-35 154.1 104 71.2
CSS0016811 Camellia sinensis var. sinensis HOM05D001551 ORTHO05D005859 4.8e-32 142.5 86 80.2
FvH4_6g04500 Fragaria vesca HOM05D001551 ORTHO05D005859 1.5e-25 120.9 72 77.8
SEGI_13041 Sequoiadendron giganteum HOM05D001551 ORTHO05D005859 1.5e-25 120.9 68 72.1
Psat3g122800 Pisum sativum HOM05D001551 ORTHO05D005859 2.5e-25 120.2 80 68.8
ECA246G1749 Erigeron canadensis HOM05D001551 ORTHO05D005859 1.5e-22 110.9 64 78.1
Pp3c16_270 Physcomitrium patens HOM05D001551 ORTHO05D005859 1.5e-22 110.9 65 69.2
HanXRQChr05g0130591 Helianthus annuus HOM05D001551 ORTHO05D005859 1.3e-21 107.8 53 86.8
Psat7g261640 Pisum sativum HOM05D001551 ORTHO05D005859 1.4e-18 97.8 89 55.1
Cfa013473 Carpinus fangiana HOM05D001551 ORTHO05D005859 6.7e-18 95.5 61 73.8
BcaC01g06064 Brassica carinata HOM05D001551 ORTHO05D005859 2.6e-14 83.6 89 51.7
Sabra15G0128500 Salix brachista HOM05D001551 ORTHO05D003058 7.7e-14 82.0 74 52.7
C03p19300 Brassica napus HOM05D001551 ORTHO05D042173 5.0e-13 79.3 43 76.7
Duzib084G0670 Durio zibethinus HOM05D001551 ORTHO05D005859 2.5e-12 77.0 52 67.3
Psat5g306440 Pisum sativum HOM05D001551 ORTHO05D006558 4.2e-12 76.3 52 71.2
Ah.11g046990 Amaranthus hybridus HOM05D001551 ORTHO05D005859 4.7e-11 72.8 54 66.7
SEGI_34327 Sequoiadendron giganteum HOM05D001551 ORTHO05D005859 1.0e-10 71.6 66 57.6
Ah.02g114530 Amaranthus hybridus HOM05D001551 ORTHO05D005859 3.0e-10 70.1 54 61.1


User provided reference genes

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