Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g068660.3 Solanum lycopersicum HOM05D008232 ORTHO05D010390 3.4e-55 218.0 104 100.0
Sopen06g025940 Solanum pennellii HOM05D008232 ORTHO05D010390 3.4e-55 218.0 104 100.0
Peaxi162Scf00207g00211 Petunia axillaris HOM05D005461 ORTHO05D007157 2.3e-43 178.7 102 81.4
Oeu036452.1 Olea europaea HOM05D008232 ORTHO05D010390 6.7e-35 150.6 104 63.5
Migut.I00645 Erythranthe guttata HOM05D008232 ORTHO05D010390 1.3e-33 146.4 103 68.0
Nitab4.5_0004890g0010 Nicotiana tabacum HOM05D008232 ORTHO05D010390 1.1e-32 143.3 90 78.9
Dinv23254 Davidia involucrata HOM05D008232 ORTHO05D010390 2.1e-25 119.0 97 57.7
PGR031G2543 Punica granatum HOM05D008232 ORTHO05D010390 4.5e-23 111.3 96 54.2
SalBow7G0137 Salvia bowleyana HOM05D008232 ORTHO05D010390 8.4e-22 107.1 88 56.8
HanXRQChr09g0274311 Helianthus annuus HOM05D008232 ORTHO05D010390 3.2e-21 105.1 97 60.8
Potri.010G248600 Populus trichocarpa HOM05D008232 ORTHO05D010390 9.3e-21 103.6 104 49.0
QL04p062033 Quercus lobata HOM05D008232 ORTHO05D010390 1.6e-20 102.8 90 52.2
Duzib235G0354 Durio zibethinus HOM05D008232 ORTHO05D010390 3.5e-20 101.7 91 50.5
Cc04_g05510 Coffea canephora HOM05D000169 ORTHO05D001214 1.0e-19 100.1 88 59.1
Lsat_1_v5_gn_4_85220 Lactuca sativa HOM05D008232 ORTHO05D010390 1.8e-19 99.4 94 58.5
PGSC0003DMG400028930 Solanum tuberosum HOM05D008232 ORTHO05D010390 3.9e-19 98.2 49 100.0
Prupe.3G107800 Prunus persica HOM05D008232 ORTHO05D010390 6.7e-19 97.4 101 47.5
MD09G1231600 Malus domestica HOM05D008232 ORTHO05D010390 1.1e-18 96.7 98 46.9
FvH4_6g27930 Fragaria vesca HOM05D008232 ORTHO05D010390 2.5e-18 95.5 101 49.5
CiPaw.03G112900 Carya illinoinensis HOM05D008232 ORTHO05D010390 4.3e-18 94.7 97 51.5
FAN02G3893 Fragaria x ananassa HOM05D008232 ORTHO05D010390 5.7e-18 94.4 101 51.5
FAN14G2943 Fragaria x ananassa HOM05D008232 ORTHO05D010390 5.7e-18 94.4 101 49.5
Atru.chr1.2756 Acer truncatum HOM05D008232 ORTHO05D010390 1.6e-17 92.8 99 48.5
AT1G73120 Arabidopsis thaliana HOM05D008232 ORTHO05D010390 8.2e-17 90.5 109 45.0
Ciclev10026814m.g Citrus clementina HOM05D008232 ORTHO05D010390 1.1e-16 90.1 103 43.7
FAN05G2300 Fragaria x ananassa HOM05D008232 ORTHO05D010390 1.1e-16 90.1 101 49.5
Manes.06G016400 Manihot esculenta HOM05D008232 ORTHO05D010390 1.1e-16 90.1 109 50.5
Eucgr.J03142 Eucalyptus grandis HOM05D008232 ORTHO05D010390 1.4e-16 89.7 102 50.0
AL2G32870 Arabidopsis lyrata HOM05D008232 ORTHO05D010390 2.4e-16 89.0 109 44.0
C02p30580 Brassica napus HOM05D008232 ORTHO05D010390 2.4e-16 89.0 111 43.2
BraA07t31461Z Brassica rapa HOM05D008232 ORTHO05D010390 3.1e-16 88.6 107 43.0
A02p18450 Brassica napus HOM05D008232 ORTHO05D010390 5.3e-16 87.8 111 41.4
BraA02t06884Z Brassica rapa HOM05D008232 ORTHO05D010390 5.3e-16 87.8 111 41.4
Thecc.06G043900 Theobroma cacao HOM05D000051 ORTHO05D000015 5.3e-16 87.8 90 45.6
C06p47310 Brassica napus HOM05D008232 ORTHO05D010390 6.9e-16 87.4 107 42.1
BolC6t39770H Brassica oleracea HOM05D008232 ORTHO05D010390 6.9e-16 87.4 107 42.1
A07p39100 Brassica napus HOM05D008232 ORTHO05D010390 9.0e-16 87.0 107 42.1
Carub.0002s1989 Capsella rubella HOM05D008232 ORTHO05D010390 1.2e-15 86.7 109 42.2
THA.LOC104813941 Tarenaya hassleriana HOM05D008232 ORTHO05D010390 1.2e-15 86.7 102 43.1
CARHR066090 Cardamine hirsuta HOM05D008232 ORTHO05D010390 2.0e-15 85.9 108 43.5
Sed0014962 Sechium edule HOM05D008232 ORTHO05D010390 3.4e-15 85.1 99 43.4
Sp5g28080 Schrenkiella parvula HOM05D008232 ORTHO05D010390 4.5e-15 84.7 109 42.2
Gohir.A05G117900 Gossypium hirsutum HOM05D008232 ORTHO05D010390 5.9e-15 84.3 91 46.2
Actinidia08925 Actinidia chinensis HOM05D008232 ORTHO05D010390 2.2e-14 82.4 63 57.1
Thhalv10019346m.g Eutrema salsugineum HOM05D008232 ORTHO05D010390 2.9e-14 82.0 109 40.4
FAN09G3435 Fragaria x ananassa HOM05D008232 ORTHO05D010390 3.8e-14 81.6 96 46.9
Aa31LG4G3390 Aethionema arabicum HOM05D008232 ORTHO05D010390 5.0e-14 81.3 108 41.7
MELO3C016243.2 Cucumis melo HOM05D008232 ORTHO05D010390 5.0e-14 81.3 99 41.4
Gohir.D05G118800 Gossypium hirsutum HOM05D008232 ORTHO05D010390 8.5e-14 80.5 90 46.7
CsaV3_4G007020 Cucumis sativus L. HOM05D008232 ORTHO05D010390 1.1e-13 80.1 99 41.4
Gorai.009G122800 Gossypium raimondii HOM05D008232 ORTHO05D010390 1.1e-13 80.1 90 46.7
TWI31G1109 Tripterygium wilfordii HOM05D008232 ORTHO05D010390 1.1e-13 80.1 84 41.7
RcHm_v2.0_Chr2g0131491 Rosa chinensis HOM05D008232 ORTHO05D010390 1.4e-13 79.7 83 48.2
TAR383G0592 Trochodendron aralioides HOM05D008232 ORTHO05D010390 3.2e-13 78.6 97 39.2
Cfa023521 Carpinus fangiana HOM05D008232 ORTHO05D010390 4.2e-13 78.2 81 49.4
PSO782G2603 Papaver somniferum HOM05D008232 ORTHO05D010390 1.6e-12 76.3 90 43.3
PSO478G5163 Papaver somniferum HOM05D008232 ORTHO05D010390 2.7e-12 75.5 95 42.1
Cpa.g.sc2471.1 Carica papaya HOM05D008232 ORTHO05D010390 7.9e-12 73.9 82 43.9
CANSAT64G1479 Cannabis sativa HOM05D008232 ORTHO05D010390 1.0e-11 73.6 109 43.1
COL.COLO4_26749 Corchorus olitorius HOM05D008232 ORTHO05D010390 3.0e-11 72.0 76 42.1
Aqoxy7G03060 Aquilegia oxysepala HOM05D008232 ORTHO05D010390 3.9e-11 71.6 97 36.1
ClCG07G011230 Citrullus lanatus HOM05D008232 ORTHO05D010390 5.7e-10 67.8 83 37.3
Hund22378 Selenicereus undatus HOM05D008232 ORTHO05D010390 6.3e-09 64.3 86 40.7
Hma1.2p1_1174F.1_g263880 Hydrangea macrophylla HOM05D006153 ORTHO05D007701 1.3e-06 56.6 96 33.3
Sc10g0006420 Simmondsia chinensis HOM05D008232 ORTHO05D010390 2.2e-06 55.8 98 35.7
MBI14_g17362_MAGBIO Magnolia biondii HOM05D008232 ORTHO05D010390 3.8e-06 55.1 94 31.9


User provided reference genes

Program Settings