Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g068480.3 Solanum lycopersicum HOM05D005969 ORTHO05D007407 2.4e-226 788.5 397 100.0
Sopen06g025730 Solanum pennellii HOM05D005969 ORTHO05D007407 4.5e-217 757.7 383 99.2
PGSC0003DMG402028489 Solanum tuberosum HOM05D005969 ORTHO05D007407 7.8e-209 730.3 379 96.6
CAN.G1932.3 Capsicum annuum HOM05D005969 ORTHO05D007407 5.6e-191 671.0 388 88.7
Nitab4.5_0000886g0040 Nicotiana tabacum HOM05D005969 ORTHO05D007407 1.6e-182 642.9 385 87.0
Nitab4.5_0008962g0040 Nicotiana tabacum HOM05D005969 ORTHO05D007407 1.1e-181 640.2 385 86.5
CANSAT56G2142 Cannabis sativa HOM05D005969 ORTHO05D007407 2.4e-157 559.3 391 73.1
Cc04_g05150 Coffea canephora HOM05D005969 ORTHO05D007407 5.3e-157 558.1 319 83.7
Haze_16671 Corylus avellana HOM05D005969 ORTHO05D007407 3.4e-156 555.4 374 75.1
Cfa001877 Carpinus fangiana HOM05D005969 ORTHO05D007407 7.6e-156 554.3 389 72.8
Lj3g0024544 Lotus japonicus HOM05D005969 ORTHO05D007407 1.7e-155 553.1 360 75.3
SGA_v2.0_scaffold37G14696 Striga asiatica HOM05D005969 ORTHO05D007407 1.7e-155 553.1 379 71.8
CSS0032429 Camellia sinensis var. sinensis HOM05D005969 ORTHO05D007407 2.9e-155 552.4 392 72.4
arahy.Tifrunner.gnm1.ann1.M9PPGY Arachis hypogaea HOM05D005969 ORTHO05D007407 3.8e-155 552.0 327 81.7
Actinidia18250 Actinidia chinensis HOM05D005969 ORTHO05D007407 4.9e-155 551.6 390 72.1
FvH4_6g28580 Fragaria vesca HOM05D005969 ORTHO05D007407 4.9e-155 551.6 328 79.6
Peaxi162Scf00207g00440 Petunia axillaris HOM05D005969 ORTHO05D007407 4.9e-155 551.6 385 76.9
Medtr4g007190 Medicago truncatula HOM05D005969 ORTHO05D007407 6.5e-155 551.2 390 71.5
Dinv23280 Davidia involucrata HOM05D005969 ORTHO05D007407 8.4e-155 550.8 334 79.6
TAR628G0900 Trochodendron aralioides HOM05D005969 ORTHO05D007407 1.4e-154 550.1 386 72.8
FAN02G2588 Fragaria x ananassa HOM05D005969 ORTHO05D007407 1.9e-154 549.7 373 72.4
Lalb_Chr01g0012061 Lupinus albus HOM05D005969 ORTHO05D007407 1.9e-154 549.7 324 80.9
arahy.Tifrunner.gnm1.ann1.WI8D6W Arachis hypogaea HOM05D005969 ORTHO05D007407 2.5e-154 549.3 367 74.4
GSVIVG01015969001 Vitis vinifera HOM05D005969 ORTHO05D007407 3.2e-154 548.9 377 73.5
AUR62027000 Chenopodium quinoa HOM05D005969 ORTHO05D007407 5.5e-154 548.1 369 73.4
Gohir.A05G118900 Gossypium hirsutum HOM05D005969 ORTHO05D007407 7.1e-154 547.7 318 81.4
Glyma.08G219200 Glycine max HOM05D005969 ORTHO05D007407 1.2e-153 547.0 319 82.1
Gorai.009G123400 Gossypium raimondii HOM05D005969 ORTHO05D007407 2.1e-153 546.2 318 81.4
Migut.I00689 Erythranthe guttata HOM05D005969 ORTHO05D007407 2.7e-153 545.8 389 71.0
Thhalv10018762m.g Eutrema salsugineum HOM05D005969 ORTHO05D007407 6.0e-153 544.7 319 81.2
RcHm_v2.0_Chr2g0132911 Rosa chinensis HOM05D005969 ORTHO05D007407 6.0e-153 544.7 343 75.8
Duzib235G1247 Durio zibethinus HOM05D005969 ORTHO05D007407 7.9e-153 544.3 318 81.4
Carub.0002s1982 Capsella rubella HOM05D005969 ORTHO05D007407 1.0e-152 543.9 319 80.3
MD10G1047600 Malus domestica HOM05D005969 ORTHO05D007407 1.0e-152 543.9 409 67.7
Psat7g262880 Pisum sativum HOM05D005969 ORTHO05D007407 1.0e-152 543.9 382 71.5
TWI12G1191 Tripterygium wilfordii HOM05D005969 ORTHO05D007407 1.0e-152 543.9 390 72.3
Gohir.D05G119800 Gossypium hirsutum HOM05D005969 ORTHO05D007407 1.3e-152 543.5 318 81.1
Hma1.2p1_0109F.1_g052610 Hydrangea macrophylla HOM05D005969 ORTHO05D007407 1.3e-152 543.5 388 72.2
Phvul.010G161700 Phaseolus vulgaris HOM05D005969 ORTHO05D007407 1.3e-152 543.5 383 70.8
CiPaw.01G255000 Carya illinoinensis HOM05D005969 ORTHO05D007407 1.8e-152 543.1 393 70.7
VMungo0331G0028 Vigna mungo HOM05D005969 ORTHO05D007407 1.8e-152 543.1 374 71.7
MSTRG.22801 Avicennia marina HOM05D005969 ORTHO05D007407 3.0e-152 542.3 365 73.2
Eucgr.F03965 Eucalyptus grandis HOM05D005969 ORTHO05D007407 3.0e-152 542.3 319 79.9
AT1G73060 Arabidopsis thaliana HOM05D005969 ORTHO05D007407 1.5e-151 540.0 319 79.6
AUR62030840 Chenopodium quinoa HOM05D005969 ORTHO05D007407 1.5e-151 540.0 377 71.9
DCAR_021370 Daucus carota HOM05D005969 ORTHO05D007407 1.9e-151 539.7 386 70.2
Lsat_1_v5_gn_1_31041 Lactuca sativa HOM05D005969 ORTHO05D007407 1.9e-151 539.7 349 74.8
Sabra01G0030300 Salix brachista HOM05D005969 ORTHO05D007407 2.5e-151 539.3 392 69.9
BraA07t31457Z Brassica rapa HOM05D005969 ORTHO05D007407 3.3e-151 538.9 319 80.3
Nn6g31679 Nelumbo nucifera HOM05D005969 ORTHO05D007407 3.3e-151 538.9 358 74.0
Sp5g28020 Schrenkiella parvula HOM05D005969 ORTHO05D007407 3.3e-151 538.9 319 80.6
Ciclev10025812m.g Citrus clementina HOM05D005969 ORTHO05D007407 5.7e-151 538.1 317 80.4
PGR102G2845 Punica granatum HOM05D005969 ORTHO05D007407 5.7e-151 538.1 404 69.6
THA.LOC104814755 Tarenaya hassleriana HOM05D005969 ORTHO05D007407 9.7e-151 537.3 318 79.6
HanXRQChr04g0099681 Helianthus annuus HOM05D005969 ORTHO05D007407 1.3e-150 537.0 362 73.5
COL.COLO4_26714 Corchorus olitorius HOM05D005969 ORTHO05D007407 1.6e-150 536.6 318 80.5
A07p39070 Brassica napus HOM05D005969 ORTHO05D007407 2.2e-150 536.2 316 80.4
C06p47280 Brassica napus HOM05D005969 ORTHO05D007407 2.2e-150 536.2 316 80.4
BolC6t39767H Brassica oleracea HOM05D005969 ORTHO05D007407 2.2e-150 536.2 316 80.4
Potri.001G044000 Populus trichocarpa HOM05D005969 ORTHO05D007407 3.7e-150 535.4 386 71.2
Aa31LG4G3330 Aethionema arabicum HOM05D005969 ORTHO05D007407 4.8e-150 535.0 346 74.6
EL10Ac9g22204 Beta vulgaris HOM05D005969 ORTHO05D007407 8.2e-150 534.3 360 72.8
AL2G32810 Arabidopsis lyrata HOM05D005969 ORTHO05D007407 5.3e-149 531.6 319 78.4
ClCG09G003350 Citrullus lanatus HOM05D005969 ORTHO05D007407 6.9e-149 531.2 386 70.2
MELO3C023469.2 Cucumis melo HOM05D005969 ORTHO05D007407 6.9e-149 531.2 408 67.6
ECA247G4019 Erigeron canadensis HOM05D005969 ORTHO05D007407 3.4e-148 528.9 370 70.8
Atru.chr10.2417 Acer truncatum HOM05D005969 ORTHO05D007407 4.5e-148 528.5 361 73.7
MBI05_g33301_MAGBIO Magnolia biondii HOM05D005969 ORTHO05D007407 4.5e-148 528.5 377 71.9
CsaV3_7G031880 Cucumis sativus L. HOM05D005969 ORTHO05D007407 5.9e-148 528.1 387 70.3
SalBow7G3052 Salvia bowleyana HOM05D005969 ORTHO05D007407 1.3e-147 526.9 394 67.0
Sc12g0005780 Simmondsia chinensis HOM05D005969 ORTHO05D007407 6.5e-147 524.6 388 68.6
ATR0807G102 Amborella trichopoda HOM05D005969 ORTHO05D007407 1.4e-146 523.5 320 77.2
Aqoxy5G00978 Aquilegia oxysepala HOM05D005969 ORTHO05D007407 2.3e-144 516.2 396 66.4
PSO541G5031 Papaver somniferum HOM05D005969 ORTHO05D007407 3.0e-144 515.8 387 66.9
Cpa.g.sc1250.2 Carica papaya HOM05D005969 ORTHO05D007407 5.1e-144 515.0 307 80.5
PSO675G4447 Papaver somniferum HOM05D005969 ORTHO05D007407 9.7e-143 510.8 341 72.1
Sed0009912 Sechium edule HOM05D005969 ORTHO05D007407 3.7e-142 508.8 410 64.1
Thecc.06G042200 Theobroma cacao HOM05D005969 ORTHO05D007407 8.2e-142 507.7 359 71.0
Hund06517 Selenicereus undatus HOM05D005969 ORTHO05D007407 1.1e-141 507.3 391 66.2
Os02g0117100 Oryza sativa ssp. japonica HOM05D005969 ORTHO05D007407 1.1e-138 497.3 316 75.3
Rhsim08G0203900 Rhododendron simsii HOM05D005969 ORTHO05D007407 1.9e-138 496.5 367 67.8
CDE06G0123 Ceratophyllum demersum HOM05D005969 ORTHO05D007407 3.2e-138 495.7 319 73.7
QL05p035856 Quercus lobata HOM05D005969 ORTHO05D007407 8.2e-134 481.1 276 83.0
HPP92_025491 Vanilla planifolia HOM05D005969 ORTHO05D007407 1.8e-133 479.9 316 71.5
unitig_27.g25102 Utricularia gibba HOM05D005969 ORTHO05D002795 2.2e-131 473.0 276 81.5
FAN05G1215 Fragaria x ananassa HOM05D005969 ORTHO05D007407 7.2e-130 468.0 327 70.9
Ah.01g024670 Amaranthus hybridus HOM05D005969 ORTHO05D007407 3.3e-127 459.1 379 66.0
Lj9C492T12 Lonicera japonica HOM05D005969 ORTHO05D007407 1.7e-126 456.8 268 81.3
HanXRQChr14g0426701 Helianthus annuus HOM05D005969 ORTHO05D007407 9.1e-125 451.1 267 79.4
vmacro19064 Vaccinium macrocarpon HOM05D005969 ORTHO05D007407 3.1e-117 426.0 259 78.4
Manes.11G065200 Manihot esculenta HOM05D005969 ORTHO05D007407 7.7e-116 421.4 321 67.0
Pp3c4_10300 Physcomitrium patens HOM05D005969 ORTHO05D007407 1.0e-115 421.0 329 61.1
Mapoly0001s0169 Marchantia polymorpha HOM05D005969 ORTHO05D007407 6.8e-112 408.3 314 60.2
HPP92_025442 Vanilla planifolia HOM05D005969 ORTHO05D007407 1.2e-111 407.5 268 70.1
AagrBONN_evm.TU.Sc2ySwM_362.432 Anthoceros agrestis HOM05D005969 ORTHO05D007407 2.4e-109 399.8 318 59.1
SMO358G0640 Selaginella moellendorffii HOM05D005969 ORTHO05D007407 1.3e-107 394.0 389 51.7
arahy.Tifrunner.gnm1.ann1.9VR9ZH Arachis hypogaea HOM05D005969 ORTHO05D007407 1.1e-106 391.0 267 72.7
arahy.Tifrunner.gnm1.ann1.5US335 Arachis hypogaea HOM05D005969 ORTHO05D007407 2.1e-105 386.7 321 63.6
Prupe.3G098800 Prunus persica HOM05D005969 ORTHO05D007407 2.3e-104 383.3 276 69.9
HanXRQChr04g0099721 Helianthus annuus HOM05D005969 ORTHO05D007407 2.2e-102 376.7 290 65.9
FAN14G2562 Fragaria x ananassa HOM05D005969 ORTHO05D007407 1.3e-99 367.5 233 75.5
CARHR066030 Cardamine hirsuta HOM05D005969 ORTHO05D007407 4.1e-93 345.9 263 64.6
arahy.Tifrunner.gnm1.ann1.79PBZ8 Arachis hypogaea HOM05D005969 ORTHO05D007407 1.6e-81 307.4 269 63.9
arahy.Tifrunner.gnm1.ann1.UJC0YQ Arachis hypogaea HOM05D005969 ORTHO05D007407 1.0e-75 288.1 268 60.1
Ca_20531_v3 Cicer arietinum L. HOM05D005969 ORTHO05D007407 8.6e-75 285.0 175 79.4
MCO01G214 Micromonas commoda HOM05D005969 ORTHO05D007407 1.3e-70 271.2 322 41.9
MCO01G215 Micromonas commoda HOM05D005969 ORTHO05D007407 1.3e-70 271.2 322 41.9
Cre03.g184550 Chlamydomonas reinhardtii HOM05D005969 ORTHO05D007407 3.2e-69 266.5 311 44.4
PRCOL_00001281 Prasinoderma coloniale HOM05D005969 ORTHO05D007407 3.3e-66 256.5 336 40.2
Sc12g0008350 Simmondsia chinensis HOM05D005969 ORTHO05D007407 7.3e-66 255.4 154 77.9
Zm00001eb230040 Zea mays HOM05D005969 ORTHO05D007407 4.0e-64 249.6 165 72.1
Hma1.2p1_0109F.1_g052630 Hydrangea macrophylla HOM05D005969 ORTHO05D007407 7.1e-61 238.8 166 72.9
Ca_20538_v3 Cicer arietinum L. HOM05D005969 ORTHO05D007407 2.5e-58 230.3 127 85.0
MCO09G747 Micromonas commoda HOM05D005969 ORTHO05D007407 7.6e-39 165.6 404 31.2
arahy.Tifrunner.gnm1.ann1.U87P2U Arachis hypogaea HOM05D005442 ORTHO05D006450 1.4e-37 161.4 91 87.9
CBR_g50572 Chara braunii HOM05D000019 ORTHO05D000048 3.1e-32 143.7 94 67.0
HanXRQChr04g0099751 Helianthus annuus HOM05D005969 ORTHO05D007407 1.7e-30 137.9 79 81.0
Sc12g0008300 Simmondsia chinensis HOM05D005969 ORTHO05D007407 3.6e-28 130.2 90 70.0
SEGI_39006 Sequoiadendron giganteum HOM05D005969 ORTHO05D007407 6.7e-27 125.9 73 74.0
arahy.Tifrunner.gnm1.ann1.4WI1XR Arachis hypogaea HOM05D005969 ORTHO05D007407 4.2e-21 106.7 105 54.3
CBR_g50568 Chara braunii HOM05D000004 ORTHO05D000002 3.6e-20 103.6 126 45.2
BcaB04g17655 Brassica carinata HOM05D005969 ORTHO05D007407 2.8e-17 94.0 64 73.4
Hma1.2p1_0109F.1_g052620 Hydrangea macrophylla HOM05D005969 ORTHO05D007407 4.1e-16 90.1 54 77.8
QL04p063552 Quercus lobata HOM05D005969 ORTHO05D007407 1.5e-15 88.2 74 59.5
HanXRQChr14g0426781 Helianthus annuus HOM05D005969 ORTHO05D007407 1.3e-14 85.1 47 85.1
SEGI_03763 Sequoiadendron giganteum HOM05D005969 ORTHO05D007407 5.0e-14 83.2 51 72.5
SEGI_15560 Sequoiadendron giganteum HOM05D005969 ORTHO05D007407 5.0e-14 83.2 51 72.5
Pp3c12_7180 Physcomitrium patens HOM05D001237 ORTHO05D009110 6.5e-14 82.8 299 27.4
PGSC0003DMG400019818 Solanum tuberosum HOM05D005969 ORTHO05D007407 8.5e-14 82.4 95 51.6
Glyma.07G022602 Glycine max HOM05D005969 ORTHO05D007407 1.9e-13 81.3 59 69.5
QL05p035860 Quercus lobata HOM05D005969 ORTHO05D007407 4.0e-11 73.6 41 87.8
TPR.G26782 Trifolium pratense HOM05D009488 ORTHO05D011222 8.8e-11 72.4 43 76.7
Lj9C492T13 Lonicera japonica HOM05D005969 ORTHO05D007407 4.4e-10 70.1 113 46.9
TPR.G23080 Trifolium pratense HOM05D005969 ORTHO05D007407 5.7e-10 69.7 42 76.2
SMO356G0709 Selaginella moellendorffii HOM05D001237 ORTHO05D009110 1.3e-09 68.6 282 28.0
Psat6g223920 Pisum sativum HOM05D002710 ORTHO05D002905 2.2e-09 67.8 138 34.8
Sopen08g024630 Solanum pennellii HOM05D001237 ORTHO05D009110 3.7e-09 67.0 288 26.4
Zm00001eb208900 Zea mays HOM05D001237 ORTHO05D009110 3.7e-09 67.0 275 24.7
Potri.003G182801 Populus trichocarpa HOM05D005969 ORTHO05D007407 4.8e-09 66.6 75 48.0
HanXRQChr04g0099771 Helianthus annuus HOM05D005969 ORTHO05D007407 6.3e-09 66.2 42 76.2
AL8G21880 Arabidopsis lyrata HOM05D001237 ORTHO05D009110 8.2e-09 65.9 275 24.7
Sp2g19180 Schrenkiella parvula HOM05D001237 ORTHO05D009110 1.1e-08 65.5 275 25.1
Carub.0008s0852 Capsella rubella HOM05D001237 ORTHO05D009110 1.4e-08 65.1 275 24.4
vmacro22924 Vaccinium macrocarpon HOM05D001237 ORTHO05D009110 1.4e-08 65.1 294 26.2
MD00G1000600 Malus domestica HOM05D001237 ORTHO05D009110 2.4e-08 64.3 308 24.0
AT5G48790 Arabidopsis thaliana HOM05D001237 ORTHO05D009110 3.1e-08 63.9 275 24.4
Thecc.03G315000 Theobroma cacao HOM05D001237 ORTHO05D009110 3.1e-08 63.9 276 25.4
Mapoly0052s0004 Marchantia polymorpha HOM05D001237 ORTHO05D009110 4.1e-08 63.5 293 25.6
Manes.17G008800 Manihot esculenta HOM05D001237 ORTHO05D009110 5.3e-08 63.2 350 24.6
Lj8A324T105 Lonicera japonica HOM05D001237 ORTHO05D009110 9.1e-08 62.4 303 25.4
ATR0829G072 Amborella trichopoda HOM05D001237 ORTHO05D009110 1.6e-07 61.6 279 24.7
arahy.Tifrunner.gnm1.ann1.GZLR9S Arachis hypogaea HOM05D005969 ORTHO05D007407 1.6e-07 61.6 80 43.8
A06p38920 Brassica napus HOM05D001237 ORTHO05D009110 1.6e-07 61.6 275 24.4
BraA06t26806Z Brassica rapa HOM05D001237 ORTHO05D009110 1.6e-07 61.6 275 24.4
Nn3g19221 Nelumbo nucifera HOM05D001237 ORTHO05D009110 1.6e-07 61.6 294 24.8
Aqoxy3G02614 Aquilegia oxysepala HOM05D001237 ORTHO05D009110 2.6e-07 60.8 321 24.6
Cc00_g24190 Coffea canephora HOM05D001237 ORTHO05D009110 3.5e-07 60.5 292 23.3
Thhalv10004626m.g Eutrema salsugineum HOM05D001237 ORTHO05D009110 3.5e-07 60.5 275 24.7
Atru.chr6.1547 Acer truncatum HOM05D001237 ORTHO05D009110 4.5e-07 60.1 305 24.6
CsaV3_3G001140 Cucumis sativus L. HOM05D001237 ORTHO05D009110 4.5e-07 60.1 298 24.5
C07p39410 Brassica napus HOM05D001237 ORTHO05D009110 1.0e-06 58.9 275 24.4
BolC7t44460H Brassica oleracea HOM05D001237 ORTHO05D009110 1.0e-06 58.9 258 24.8
MCO15G307 Micromonas commoda HOM05D001237 ORTHO05D009110 2.2e-06 57.8 284 23.9


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