Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g068420.1 Solanum lycopersicum HOM05D000410 ORTHO05D003193 3.9e-35 151.0 80 100.0
Solyc10g055560.2 Solanum lycopersicum HOM05D000410 ORTHO05D003193 2.0e-23 112.1 76 76.3
PGSC0003DMG400026724 Solanum tuberosum HOM05D000410 ORTHO05D003193 5.9e-23 110.5 71 83.1
Sopen10g025300 Solanum pennellii HOM05D000410 ORTHO05D003193 1.4e-21 105.9 70 80.0
Peaxi162Scf00042g02412 Petunia axillaris HOM05D000410 ORTHO05D003193 1.4e-16 89.4 73 64.4
Nitab4.5_0002763g0020 Nicotiana tabacum HOM05D000410 ORTHO05D003193 5.3e-16 87.4 73 64.4
Nitab4.5_0005236g0030 Nicotiana tabacum HOM05D000410 ORTHO05D003193 6.5e-14 80.5 61 72.1
Nitab4.5_0003914g0080 Nicotiana tabacum HOM05D000410 ORTHO05D003193 7.2e-13 77.0 72 59.7
SalBow3G0122 Salvia bowleyana HOM05D000410 ORTHO05D003193 1.6e-12 75.9 67 55.2
GSVIVG01024021001 Vitis vinifera HOM05D000410 ORTHO05D003193 6.1e-12 73.9 62 64.5
Nitab4.5_0000369g0100 Nicotiana tabacum HOM05D000410 ORTHO05D003193 8.0e-12 73.6 64 62.5
Nitab4.5_0000283g0380 Nicotiana tabacum HOM05D000410 ORTHO05D003193 1.0e-11 73.2 72 56.9
Cfa005246 Carpinus fangiana HOM05D000410 ORTHO05D003193 1.4e-11 72.8 66 59.1
CSS0000474 Camellia sinensis var. sinensis HOM05D000410 ORTHO05D003193 1.8e-11 72.4 75 54.7
Peaxi162Scf00362g00634 Petunia axillaris HOM05D000410 ORTHO05D003193 1.8e-11 72.4 60 68.3
Hma1.2p1_0163F.1_g072480 Hydrangea macrophylla HOM05D000410 ORTHO05D003193 2.3e-11 72.0 71 53.5
Rhsim05G0056800 Rhododendron simsii HOM05D000410 ORTHO05D003193 3.0e-11 71.6 64 56.2
Haze_02137 Corylus avellana HOM05D000410 ORTHO05D003193 4.0e-11 71.2 61 63.9
Duzib052G0401 Durio zibethinus HOM05D000410 ORTHO05D003193 4.0e-11 71.2 73 52.1
PGSC0003DMG400006187 Solanum tuberosum HOM05D000410 ORTHO05D003193 4.0e-11 71.2 75 54.7
Actinidia23579 Actinidia chinensis HOM05D000410 ORTHO05D003193 5.2e-11 70.9 71 56.3
CiPaw.05G082300 Carya illinoinensis HOM05D000410 ORTHO05D003193 6.7e-11 70.5 72 54.2
Hund00021 Selenicereus undatus HOM05D000410 ORTHO05D003193 8.8e-11 70.1 61 63.9
CiPaw.06G121800 Carya illinoinensis HOM05D000410 ORTHO05D003193 1.1e-10 69.7 61 60.7
Cc09_g09780 Coffea canephora HOM05D000410 ORTHO05D003193 1.1e-10 69.7 63 60.3
Duzib132G0350 Durio zibethinus HOM05D000410 ORTHO05D003193 1.1e-10 69.7 78 52.6
CSS0036741 Camellia sinensis var. sinensis HOM05D000410 ORTHO05D003193 1.5e-10 69.3 64 57.8
QL11p050700 Quercus lobata HOM05D000410 ORTHO05D003193 1.5e-10 69.3 66 56.1
MD10G1124700 Malus domestica HOM05D000410 ORTHO05D003193 2.0e-10 68.9 74 55.4
Dinv41938 Davidia involucrata HOM05D003994 ORTHO05D004957 2.6e-10 68.6 62 59.7
Nitab4.5_0000079g0280 Nicotiana tabacum HOM05D000410 ORTHO05D003193 3.3e-10 68.2 61 60.7
Oeu006690.1 Olea europaea HOM05D000410 ORTHO05D003193 3.3e-10 68.2 74 50.0
MSTRG.27637 Avicennia marina HOM05D000410 ORTHO05D003193 5.7e-10 67.4 70 51.4
Nn5g30786 Nelumbo nucifera HOM05D000410 ORTHO05D003193 1.3e-09 66.2 66 57.6
Actinidia00623 Actinidia chinensis HOM05D000410 ORTHO05D003193 1.7e-09 65.9 74 48.6
EL10Ac9g21378 Beta vulgaris HOM05D000410 ORTHO05D003193 1.7e-09 65.9 64 54.7
Ciclev10028906m.g Citrus clementina HOM05D000410 ORTHO05D003193 1.7e-09 65.9 64 57.8
Lj5P178T68 Lonicera japonica HOM05D000410 ORTHO05D003193 1.7e-09 65.9 64 53.1
MD05G1122000 Malus domestica HOM05D000410 ORTHO05D003193 1.7e-09 65.9 74 51.4
RcHm_v2.0_Chr6g0251771 Rosa chinensis HOM05D000410 ORTHO05D003193 1.7e-09 65.9 61 57.4
FvH4_2g01150 Fragaria vesca HOM05D000410 ORTHO05D003193 2.8e-09 65.1 77 48.1
Prupe.8G165800 Prunus persica HOM05D000410 ORTHO05D003193 3.7e-09 64.7 77 49.4
QL02p012235 Quercus lobata HOM05D000410 ORTHO05D003193 3.7e-09 64.7 73 49.3
Thecc.02G059900 Theobroma cacao HOM05D000410 ORTHO05D003193 3.7e-09 64.7 66 54.5
FAN24G3571 Fragaria x ananassa HOM05D000410 ORTHO05D003193 6.3e-09 63.9 72 47.2
FAN27G1294 Fragaria x ananassa HOM05D000410 ORTHO05D003193 6.3e-09 63.9 72 48.6
Gohir.A01G168800 Gossypium hirsutum HOM05D000410 ORTHO05D003193 6.3e-09 63.9 56 60.7
Gohir.D01G159700 Gossypium hirsutum HOM05D000410 ORTHO05D003193 6.3e-09 63.9 56 60.7
Gorai.002G198200 Gossypium raimondii HOM05D000410 ORTHO05D003193 6.3e-09 63.9 56 60.7
Sopen01g053650 Solanum pennellii HOM05D000410 ORTHO05D003193 6.3e-09 63.9 64 57.8
FAN15G1862 Fragaria x ananassa HOM05D000410 ORTHO05D003193 8.2e-09 63.5 72 47.2
MSTRG.19988 Avicennia marina HOM05D000410 ORTHO05D003193 1.1e-08 63.2 73 46.6
Migut.N01320 Erythranthe guttata HOM05D000410 ORTHO05D003193 1.1e-08 63.2 73 42.5
TWI31G0485 Tripterygium wilfordii HOM05D000410 ORTHO05D003193 1.1e-08 63.2 76 50.0
AUR62013030 Chenopodium quinoa HOM05D000410 ORTHO05D003193 1.4e-08 62.8 64 53.1
Sc18g0006430 Simmondsia chinensis HOM05D000410 ORTHO05D003193 1.4e-08 62.8 61 55.7
Solyc01g111610.3 Solanum lycopersicum HOM05D000410 ORTHO05D003193 1.8e-08 62.4 64 56.2
AUR62043668 Chenopodium quinoa HOM05D000410 ORTHO05D003193 2.4e-08 62.0 64 51.6
Oeu055668.1 Olea europaea HOM05D000410 ORTHO05D003193 2.4e-08 62.0 74 47.3
Oeu055669.1 Olea europaea HOM05D000410 ORTHO05D003193 2.4e-08 62.0 74 47.3
Cpa.g.sc37.131 Carica papaya HOM05D000410 ORTHO05D003193 3.1e-08 61.6 73 45.2
TWI79G1704 Tripterygium wilfordii HOM05D000410 ORTHO05D003193 3.1e-08 61.6 71 50.7
MSTRG.5452 Avicennia marina HOM05D000410 ORTHO05D003193 4.1e-08 61.2 71 45.1
Lsat_1_v5_gn_8_124401 Lactuca sativa HOM05D000410 ORTHO05D003193 4.1e-08 61.2 65 52.3
TAR628G0975 Trochodendron aralioides HOM05D000410 ORTHO05D003193 4.1e-08 61.2 71 53.5
Potri.009G135400 Populus trichocarpa HOM05D000410 ORTHO05D003193 5.3e-08 60.8 71 53.5
TAR381G0116 Trochodendron aralioides HOM05D000410 ORTHO05D003193 5.3e-08 60.8 60 55.0
MSTRG.16907 Avicennia marina HOM05D000410 ORTHO05D003193 7.0e-08 60.5 61 50.8
Potri.004G175500 Populus trichocarpa HOM05D000410 ORTHO05D003193 7.0e-08 60.5 74 50.0
vmacro17346 Vaccinium macrocarpon HOM05D000410 ORTHO05D003193 9.1e-08 60.1 64 48.4
AT4G35070 Arabidopsis thaliana HOM05D000410 ORTHO05D003193 1.2e-07 59.7 60 53.3
DCAR_003171 Daucus carota HOM05D000410 ORTHO05D003193 1.2e-07 59.7 60 53.3
TWI75G0032 Tripterygium wilfordii HOM05D000410 ORTHO05D003193 1.6e-07 59.3 73 46.6
Sabra04G0117300 Salix brachista HOM05D000410 ORTHO05D003193 2.0e-07 58.9 72 48.6
Dinv14107 Davidia involucrata HOM05D000410 ORTHO05D003193 2.7e-07 58.5 54 59.3
SGA_v2.0_scaffold58G20365 Striga asiatica HOM05D000410 ORTHO05D003193 2.7e-07 58.5 64 46.9
Aqoxy6G02157 Aquilegia oxysepala HOM05D000410 ORTHO05D003193 3.5e-07 58.2 53 60.4
AL7G16150 Arabidopsis lyrata HOM05D000410 ORTHO05D003193 3.5e-07 58.2 60 51.7
Manes.11G096100 Manihot esculenta HOM05D000410 ORTHO05D003193 3.5e-07 58.2 75 46.7
CARHR243350 Cardamine hirsuta HOM05D000410 ORTHO05D003193 4.5e-07 57.8 60 51.7
Duzib248G1595 Durio zibethinus HOM05D000410 ORTHO05D003193 4.5e-07 57.8 55 52.7
MD15G1009900 Malus domestica HOM05D000410 ORTHO05D003193 4.5e-07 57.8 64 46.9
Sabra09G0105100 Salix brachista HOM05D000410 ORTHO05D003193 4.5e-07 57.8 61 55.7
Sed0012285 Sechium edule HOM05D000410 ORTHO05D003193 5.9e-07 57.4 64 45.3
CiPaw.07G146500 Carya illinoinensis HOM05D000410 ORTHO05D003193 7.7e-07 57.0 75 45.3
Gorai.002G002800 Gossypium raimondii HOM05D000410 ORTHO05D003193 7.7e-07 57.0 52 59.6
Manes.04G076100 Manihot esculenta HOM05D000410 ORTHO05D003193 7.7e-07 57.0 75 44.0
Migut.B00078 Erythranthe guttata HOM05D000410 ORTHO05D003193 1.3e-06 56.2 64 45.3
Gohir.A01G002466 Gossypium hirsutum HOM05D000410 ORTHO05D003193 1.3e-06 56.2 72 48.6
Gohir.D01G002150 Gossypium hirsutum HOM05D000410 ORTHO05D003193 1.7e-06 55.8 53 56.6
Manes.18G011107 Manihot esculenta HOM05D000410 ORTHO05D003193 1.7e-06 55.8 79 43.0
PSO675G4644 Papaver somniferum HOM05D000410 ORTHO05D003193 1.7e-06 55.8 73 47.9
TAR625G1321 Trochodendron aralioides HOM05D000410 ORTHO05D003193 1.7e-06 55.8 74 48.6
Actinidia20512 Actinidia chinensis HOM05D000410 ORTHO05D003193 2.2e-06 55.5 71 42.3
COL.COLO4_17340 Corchorus olitorius HOM05D000410 ORTHO05D003193 2.2e-06 55.5 55 56.4
HanXRQChr17g0570671 Helianthus annuus HOM05D000410 ORTHO05D003193 2.2e-06 55.5 66 45.5
PSO541G1763 Papaver somniferum HOM05D000410 ORTHO05D003193 2.2e-06 55.5 74 47.3
Sc14g0002270 Simmondsia chinensis HOM05D000410 ORTHO05D003193 2.2e-06 55.5 53 54.7
arahy.Tifrunner.gnm1.ann1.2PCK9I Arachis hypogaea HOM05D000410 ORTHO05D003193 2.9e-06 55.1 66 40.9
ECA233G2636 Erigeron canadensis HOM05D000410 ORTHO05D003193 2.9e-06 55.1 61 49.2
Cfa013984 Carpinus fangiana HOM05D000410 ORTHO05D003193 5.0e-06 54.3 60 41.7
VMungo1309G3017 Vigna mungo HOM05D000410 ORTHO05D003193 5.0e-06 54.3 71 45.1
ClCG02G004080 Citrullus lanatus HOM05D000410 ORTHO05D003193 6.5e-06 53.9 64 43.8
PGR142G2306 Punica granatum HOM05D000410 ORTHO05D003193 6.5e-06 53.9 50 52.0
THA.LOC104819655 Tarenaya hassleriana HOM05D000410 ORTHO05D003193 6.5e-06 53.9 59 50.8
SGA_v2.0_scaffold32G13284 Striga asiatica HOM05D000410 ORTHO05D003193 8.5e-06 53.5 64 43.8


User provided reference genes

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