Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005235g0030 Nicotiana tabacum HOM05D004554 ORTHO05D005360 6.3e-73 277.3 138 100.0
Solyc06g068030.3 Solanum lycopersicum HOM05D004554 ORTHO05D005360 6.3e-73 277.3 138 100.0
Nitab4.5_0000620g0010 Nicotiana tabacum HOM05D004554 ORTHO05D005360 1.4e-72 276.2 138 99.3
PGSC0003DMG402028512 Solanum tuberosum HOM05D004554 ORTHO05D005360 5.0e-70 267.7 138 97.8
Oeu052276.1 Olea europaea HOM05D004554 ORTHO05D005360 2.1e-68 262.3 138 94.9
MSTRG.4713 Avicennia marina HOM05D004554 ORTHO05D005360 4.6e-68 261.2 138 94.2
Dinv30578 Davidia involucrata HOM05D004554 ORTHO05D005360 6.1e-68 260.8 138 95.7
Migut.D01058 Erythranthe guttata HOM05D004554 ORTHO05D005360 7.9e-68 260.4 138 93.5
Lsat_1_v5_gn_4_105840 Lactuca sativa HOM05D004554 ORTHO05D005360 1.4e-67 259.6 138 90.6
ECA232G3015 Erigeron canadensis HOM05D004554 ORTHO05D005360 3.9e-67 258.1 138 91.3
Actinidia08808 Actinidia chinensis HOM05D004554 ORTHO05D005360 3.3e-66 255.0 138 92.8
Hma1.2p1_0515F.1_g170190 Hydrangea macrophylla HOM05D004554 ORTHO05D005360 5.7e-66 254.2 138 92.8
CSS0043216 Camellia sinensis var. sinensis HOM05D004554 ORTHO05D005360 7.4e-66 253.8 138 92.0
CSS0011930 Camellia sinensis var. sinensis HOM05D004554 ORTHO05D005360 9.7e-66 253.4 138 93.5
HanXRQChr16g0500531 Helianthus annuus HOM05D004554 ORTHO05D005360 1.3e-65 253.1 172 76.2
TWI31G0401 Tripterygium wilfordii HOM05D004554 ORTHO05D005360 2.8e-65 251.9 138 91.3
Duzib268G0645 Durio zibethinus HOM05D004554 ORTHO05D005360 3.7e-65 251.5 138 91.3
CANSAT56G2605 Cannabis sativa HOM05D004554 ORTHO05D005360 6.3e-65 250.8 138 90.6
Thecc.04G171500 Theobroma cacao HOM05D004554 ORTHO05D005360 6.3e-65 250.8 138 91.3
CSS0017610 Camellia sinensis var. sinensis HOM05D004554 ORTHO05D005360 8.2e-65 250.4 159 82.4
CARHR074020 Cardamine hirsuta HOM05D004554 ORTHO05D005360 1.1e-64 250.0 138 89.9
AL2G40970 Arabidopsis lyrata HOM05D004554 ORTHO05D005360 1.4e-64 249.6 138 89.9
AL6G52910 Arabidopsis lyrata HOM05D004554 ORTHO05D005360 1.4e-64 249.6 138 89.9
AT1G80500 Arabidopsis thaliana HOM05D004554 ORTHO05D005360 1.4e-64 249.6 138 89.9
PSO170G6065 Papaver somniferum HOM05D004554 ORTHO05D005360 1.4e-64 249.6 138 87.7
Potri.003G183400 Populus trichocarpa HOM05D004554 ORTHO05D005360 1.4e-64 249.6 138 89.9
CiPaw.03G115100 Carya illinoinensis HOM05D004554 ORTHO05D005360 1.8e-64 249.2 138 90.6
Ciclev10022803m.g Citrus clementina HOM05D004554 ORTHO05D005360 1.8e-64 249.2 138 90.6
Duzib151G1169 Durio zibethinus HOM05D004554 ORTHO05D005360 1.8e-64 249.2 138 90.6
Prupe.1G580600 Prunus persica HOM05D004554 ORTHO05D005360 1.8e-64 249.2 138 90.6
Gohir.A02G092800 Gossypium hirsutum HOM05D004554 ORTHO05D005360 2.4e-64 248.8 138 89.9
CSS0029734 Camellia sinensis var. sinensis HOM05D004554 ORTHO05D005360 3.1e-64 248.4 148 85.1
Eucgr.E03470 Eucalyptus grandis HOM05D004554 ORTHO05D005360 3.1e-64 248.4 138 89.9
Gohir.D02G111000 Gossypium hirsutum HOM05D004554 ORTHO05D005360 3.1e-64 248.4 138 89.9
Gorai.005G125900 Gossypium raimondii HOM05D004554 ORTHO05D005360 3.1e-64 248.4 138 89.9
Glyma.04G207300 Glycine max HOM05D004554 ORTHO05D005360 4.1e-64 248.1 138 89.9
Potri.001G043400 Populus trichocarpa HOM05D004554 ORTHO05D005360 4.1e-64 248.1 138 89.9
Carub.0002s1001 Capsella rubella HOM05D004554 ORTHO05D005360 5.3e-64 247.7 138 89.1
Psat5g058840 Pisum sativum HOM05D004554 ORTHO05D005360 5.3e-64 247.7 138 89.1
PGR119G2244 Punica granatum HOM05D004554 ORTHO05D005360 5.3e-64 247.7 138 89.9
TPR.G7873 Trifolium pratense HOM05D004554 ORTHO05D005360 5.3e-64 247.7 138 89.1
vmacro21051 Vaccinium macrocarpon HOM05D004554 ORTHO05D005360 5.3e-64 247.7 153 83.0
Hund00544 Selenicereus undatus HOM05D004554 ORTHO05D005360 6.9e-64 247.3 138 89.1
BraA09t37732Z Brassica rapa HOM05D004554 ORTHO05D005360 9.1e-64 246.9 149 83.2
Phvul.009G152000 Phaseolus vulgaris HOM05D004554 ORTHO05D005360 9.1e-64 246.9 138 89.1
THA.LOC104819505 Tarenaya hassleriana HOM05D004554 ORTHO05D005360 9.1e-64 246.9 138 89.1
Zm00001eb111730 Zea mays HOM05D004554 ORTHO05D005360 1.2e-63 246.5 138 87.0
Sp5g35300 Schrenkiella parvula HOM05D004554 ORTHO05D005360 1.5e-63 246.1 138 88.4
RcHm_v2.0_Chr1g0339521 Rosa chinensis HOM05D004554 ORTHO05D005360 2.0e-63 245.7 138 88.4
Glyma.06G158300 Glycine max HOM05D004554 ORTHO05D005360 2.6e-63 245.4 138 88.4
CDE01G0639 Ceratophyllum demersum HOM05D004554 ORTHO05D005360 3.4e-63 245.0 138 87.7
Duzib212G0633 Durio zibethinus HOM05D004554 ORTHO05D005360 3.4e-63 245.0 138 87.0
MELO3C023193.2 Cucumis melo HOM05D004554 ORTHO05D005360 4.5e-63 244.6 138 87.7
Os02g0613600 Oryza sativa ssp. japonica HOM05D004554 ORTHO05D005360 5.9e-63 244.2 138 86.2
Lj1g0025297 Lotus japonicus HOM05D004554 ORTHO05D005360 1.0e-62 243.4 138 87.0
Sp2g09550 Schrenkiella parvula HOM05D004554 ORTHO05D005360 1.0e-62 243.4 138 87.7
PSO541G2287 Papaver somniferum HOM05D004554 ORTHO05D005360 2.2e-62 242.3 138 88.4
PSO675G8776 Papaver somniferum HOM05D004554 ORTHO05D005360 2.2e-62 242.3 138 88.4
Sed0018246 Sechium edule HOM05D004554 ORTHO05D005360 2.9e-62 241.9 138 86.2
THA.LOC104807163 Tarenaya hassleriana HOM05D004554 ORTHO05D005360 2.9e-62 241.9 138 87.7
SEGI_00661 Sequoiadendron giganteum HOM05D004554 ORTHO05D005360 3.8e-62 241.5 138 86.2
Manes.04G101300 Manihot esculenta HOM05D004554 ORTHO05D005360 6.5e-62 240.7 138 87.0
CiPaw.04G077100 Carya illinoinensis HOM05D004554 ORTHO05D005360 8.5e-62 240.4 138 85.5
Zm00001eb331160 Zea mays HOM05D004554 ORTHO05D005360 1.1e-61 240.0 139 86.3
Manes.11G068800 Manihot esculenta HOM05D004554 ORTHO05D005360 1.9e-61 239.2 138 87.0
AagrBONN_evm.TU.Sc2ySwM_362.569 Anthoceros agrestis HOM05D004554 ORTHO05D005360 1.5e-58 229.6 138 79.0
A09p21270 Brassica napus HOM05D003109 ORTHO05D003578 1.5e-58 229.6 139 82.0
Mapoly0010s0129 Marchantia polymorpha HOM05D004554 ORTHO05D005360 2.0e-58 229.2 138 79.0
Pp3c14_6180 Physcomitrium patens HOM05D004554 ORTHO05D005360 2.6e-58 228.8 138 79.7
VMungo1309G1053 Vigna mungo HOM05D004554 ORTHO05D005360 2.6e-58 228.8 138 84.1
Medtr1g102650 Medicago truncatula HOM05D004554 ORTHO05D005360 4.4e-58 228.0 169 71.0
Gorai.006G230100 Gossypium raimondii HOM05D004554 ORTHO05D005360 2.8e-57 225.3 138 83.3
Peaxi162Scf00207g00743 Petunia axillaris HOM05D004554 ORTHO05D005360 4.8e-57 224.6 138 83.3
FAN10G0691 Fragaria x ananassa HOM05D004554 ORTHO05D005360 8.2e-57 223.8 189 65.1
Gohir.D09G206200 Gossypium hirsutum HOM05D004554 ORTHO05D005360 1.1e-56 223.4 138 82.6
Hma1.2p1_1324F.1_g275710 Hydrangea macrophylla HOM05D004554 ORTHO05D005360 1.4e-51 206.5 126 84.1
Gohir.A09G212650 Gossypium hirsutum HOM05D004554 ORTHO05D005360 3.7e-49 198.4 122 83.6
Os04g0503800 Oryza sativa ssp. japonica HOM05D004554 ORTHO05D005360 8.2e-49 197.2 112 85.7
SGA_v2.0_scaffold16G07612 Striga asiatica HOM05D004554 ORTHO05D005360 2.6e-47 192.2 108 85.2
Sc10g0005760 Simmondsia chinensis HOM05D004554 ORTHO05D005360 4.5e-47 191.4 107 89.7
Aa31sc43G10 Aethionema arabicum HOM05D004554 ORTHO05D005360 6.5e-46 187.6 138 73.2
Thhalv10019800m.g Eutrema salsugineum HOM05D004554 ORTHO05D005360 8.5e-46 187.2 171 62.0
Sc25g0002650 Simmondsia chinensis HOM05D004554 ORTHO05D005360 8.5e-46 187.2 107 87.9
vmacro16909 Vaccinium macrocarpon HOM05D004554 ORTHO05D005360 8.5e-46 187.2 138 73.9
TWI75G0475 Tripterygium wilfordii HOM05D004554 ORTHO05D005360 2.5e-45 185.7 108 84.3
unitig_899.g14783 Utricularia gibba HOM05D004554 ORTHO05D005360 1.4e-43 179.9 138 68.8
Sabra01G0029900 Salix brachista HOM05D004554 ORTHO05D005360 4.0e-43 178.3 138 70.3
SGA_v2.0_scaffold117G32370 Striga asiatica HOM05D004554 ORTHO05D005360 2.6e-42 175.6 138 68.1
FAN01G0304 Fragaria x ananassa HOM05D004554 ORTHO05D007400 4.4e-42 174.9 140 67.1
BcaB07g30930 Brassica carinata HOM05D004554 ORTHO05D005360 9.8e-42 173.7 138 67.4
Lj1g0023737 Lotus japonicus HOM05D004554 ORTHO05D005360 9.1e-40 167.2 158 59.5
Thhalv10001067m.g Eutrema salsugineum HOM05D004554 ORTHO05D005360 8.0e-36 154.1 82 93.9
CAN.G395.49 Capsicum annuum HOM05D004554 ORTHO05D005360 2.3e-35 152.5 78 97.4
Sopen06g025310 Solanum pennellii HOM05D004554 ORTHO05D005360 2.3e-35 152.5 78 97.4
PGSC0003DMG401028512 Solanum tuberosum HOM05D004554 ORTHO05D005360 2.3e-35 152.5 78 97.4
Carub.0002s0990 Capsella rubella HOM05D004554 ORTHO05D005360 3.4e-34 148.7 82 91.5
SalBow3G2596 Salvia bowleyana HOM05D004554 ORTHO05D005360 4.4e-34 148.3 83 88.0
HanXRQChr09g0274941 Helianthus annuus HOM05D004554 ORTHO05D005360 5.7e-34 147.9 78 91.0
MCO03G231 Micromonas commoda HOM05D004554 ORTHO05D005360 5.7e-34 147.9 144 47.2
SalBow2G1085 Salvia bowleyana HOM05D004554 ORTHO05D005360 5.7e-34 147.9 78 93.6
SMO244G0023 Selaginella moellendorffii HOM05D004554 ORTHO05D005360 5.7e-34 147.9 155 49.0
Cc02_g38630 Coffea canephora HOM05D004554 ORTHO05D005360 2.8e-33 145.6 78 91.0
Oeu053426.1 Olea europaea HOM05D004554 ORTHO05D005360 6.3e-33 144.4 78 91.0
Rhsim08G0215600 Rhododendron simsii HOM05D004554 ORTHO05D005360 6.3e-33 144.4 78 92.3
Rhsim12G0192700 Rhododendron simsii HOM05D004554 ORTHO05D005360 1.4e-32 143.3 78 91.0
Lj9P502T35 Lonicera japonica HOM05D004554 ORTHO05D005360 4.1e-32 141.7 87 80.5
GSVIVG01017278001 Vitis vinifera HOM05D004554 ORTHO05D005360 5.4e-32 141.4 78 89.7
ATR0138G017 Amborella trichopoda HOM05D004554 ORTHO05D005360 9.1e-32 140.6 78 88.5
Cre13.g571600 Chlamydomonas reinhardtii HOM05D004554 ORTHO05D005360 9.1e-32 140.6 135 49.6
Ah.11g047570 Amaranthus hybridus HOM05D004554 ORTHO05D005360 1.2e-31 140.2 78 89.7
Lsat_1_v5_gn_5_132260 Lactuca sativa HOM05D004554 ORTHO05D005360 1.2e-31 140.2 128 60.2
A07p45180 Brassica napus HOM05D004554 ORTHO05D005360 2.7e-31 139.0 78 85.9
C06p54030 Brassica napus HOM05D004554 ORTHO05D005360 2.7e-31 139.0 78 85.9
BolC6t40416H Brassica oleracea HOM05D004554 ORTHO05D005360 2.7e-31 139.0 78 85.9
BraA07t32021Z Brassica rapa HOM05D004554 ORTHO05D005360 2.7e-31 139.0 78 85.9
Atru.chr2.1839 Acer truncatum HOM05D004554 ORTHO05D005360 4.5e-31 138.3 78 88.5
EL10Ac6g14261 Beta vulgaris HOM05D004554 ORTHO05D005360 4.5e-31 138.3 76 90.8
PRCOL_00001690 Prasinoderma coloniale HOM05D004554 ORTHO05D005360 4.5e-31 138.3 130 49.2
BcaC04g21821 Brassica carinata HOM05D004554 ORTHO05D005360 5.9e-31 137.9 78 85.9
BolC9t55589H Brassica oleracea HOM05D004554 ORTHO05D005360 5.9e-31 137.9 78 85.9
QL06p045297 Quercus lobata HOM05D004554 ORTHO05D005360 1.0e-30 137.1 78 87.2
COL.COLO4_28385 Corchorus olitorius HOM05D004554 ORTHO05D005360 1.3e-30 136.7 78 85.9
arahy.Tifrunner.gnm1.ann1.HM0BYB Arachis hypogaea HOM05D004554 ORTHO05D005360 1.7e-30 136.3 78 85.9
arahy.Tifrunner.gnm1.ann1.NV3HYF Arachis hypogaea HOM05D004554 ORTHO05D005360 1.7e-30 136.3 78 85.9
arahy.Tifrunner.gnm1.ann1.YS1HQ5 Arachis hypogaea HOM05D004554 ORTHO05D005360 1.7e-30 136.3 78 85.9
QL10p039943 Quercus lobata HOM05D004554 ORTHO05D005360 1.7e-30 136.3 78 85.9
MD08G1243100 Malus domestica HOM05D004554 ORTHO05D005360 2.3e-30 136.0 78 85.9
Hund06576 Selenicereus undatus HOM05D004554 ORTHO05D005360 2.9e-30 135.6 78 87.2
arahy.Tifrunner.gnm1.ann1.Z4TQX9 Arachis hypogaea HOM05D004554 ORTHO05D005360 3.8e-30 135.2 78 84.6
Lalb_Chr08g0237951 Lupinus albus HOM05D004554 ORTHO05D005360 6.6e-30 134.4 78 83.3
MD15G1436700 Malus domestica HOM05D004554 ORTHO05D005360 8.6e-30 134.0 78 84.6
FvH4_7g07440 Fragaria vesca HOM05D004554 ORTHO05D005360 2.5e-29 132.5 78 82.1
FAN06G4122 Fragaria x ananassa HOM05D004554 ORTHO05D005360 2.5e-29 132.5 78 82.1
ClCG02G000050 Citrullus lanatus HOM05D004554 ORTHO05D005360 3.3e-29 132.1 78 82.1
CsaV3_2G019710 Cucumis sativus L. HOM05D004554 ORTHO05D005360 3.3e-29 132.1 78 82.1
DCAR_025490 Daucus carota HOM05D004554 ORTHO05D005360 4.2e-29 131.7 75 82.7
Lj5A69T38 Lonicera japonica HOM05D004554 ORTHO05D005360 4.2e-29 131.7 116 63.8
FAN03G1590 Fragaria x ananassa HOM05D004554 ORTHO05D005360 3.6e-28 128.6 78 79.5
Rhsim12G0192800 Rhododendron simsii HOM05D004554 ORTHO05D005360 2.3e-27 125.9 61 96.7
Eucgr.L03064 Eucalyptus grandis HOM05D004554 ORTHO05D005360 3.4e-26 122.1 61 93.4
Atru.chr2.1838 Acer truncatum HOM05D004554 ORTHO05D005360 4.1e-24 115.2 56 98.2
Cc02_g38640 Coffea canephora HOM05D004554 ORTHO05D005360 4.1e-24 115.2 56 98.2
Lalb_Chr08g0237961 Lupinus albus HOM05D004554 ORTHO05D005360 4.1e-24 115.2 56 98.2
CsaV3_2G019720 Cucumis sativus L. HOM05D004554 ORTHO05D005360 9.2e-24 114.0 56 94.6
HanXRQChr09g0274931 Helianthus annuus HOM05D004554 ORTHO05D005360 1.2e-23 113.6 56 94.6
MD08G1243200 Malus domestica HOM05D004554 ORTHO05D005360 1.6e-23 113.2 56 96.4
MD15G1436800 Malus domestica HOM05D004554 ORTHO05D005360 1.6e-23 113.2 56 96.4
Carub.0002s2706 Capsella rubella HOM05D004554 ORTHO05D005360 1.0e-22 110.5 56 94.6
CBR_g36380 Chara braunii HOM05D004554 ORTHO05D005360 1.7e-22 109.8 75 64.0
Sed0002995 Sechium edule HOM05D004554 ORTHO05D005360 6.6e-22 107.8 112 54.5
Ca_17005_v3 Cicer arietinum L. HOM05D004554 ORTHO05D005360 4.7e-20 101.7 57 84.2
Medtr3g097015 Medicago truncatula HOM05D004554 ORTHO05D005360 6.1e-20 101.3 56 85.7
TAR626G1579 Trochodendron aralioides HOM05D004554 ORTHO05D005360 8.9e-19 97.4 51 92.2
C09p27060 Brassica napus HOM05D004554 ORTHO05D005360 3.7e-17 92.0 52 84.6
arahy.Tifrunner.gnm1.ann1.MTW2QA Arachis hypogaea HOM05D004554 ORTHO05D005360 5.0e-14 81.6 45 86.7
RcHm_v2.0_Chr2g0154941 Rosa chinensis HOM05D004554 ORTHO05D005360 1.5e-13 80.1 46 84.8
Haze_26443 Corylus avellana HOM05D000849 ORTHO05D005360 8.1e-12 74.3 128 34.4
arahy.Tifrunner.gnm1.ann1.QTZM33 Arachis hypogaea HOM05D004554 ORTHO05D005360 2.2e-09 66.2 41 80.5
SEGI_29883 Sequoiadendron giganteum HOM05D005689 ORTHO05D007060 3.5e-07 58.9 138 25.4
Sp7g37220 Schrenkiella parvula HOM05D005689 ORTHO05D007060 1.0e-06 57.4 135 25.2
Cpa.g.c40005 Carica papaya HOM05D004554 ORTHO05D005360 3.0e-06 55.8 25 96.0
QL11p051435 Quercus lobata HOM05D004554 ORTHO05D005360 3.0e-06 55.8 29 89.7
SMO228G0084 Selaginella moellendorffii HOM05D005689 ORTHO05D007060 8.6e-06 54.3 138 26.1


User provided reference genes

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