Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g066190.3 Solanum lycopersicum HOM05D006875 ORTHO05D008416 9.0e-90 333.6 168 100.0
Sopen06g024670 Solanum pennellii HOM05D006875 ORTHO05D008416 4.2e-87 324.7 168 97.6
PGSC0003DMG400020470 Solanum tuberosum HOM05D006875 ORTHO05D008416 1.2e-86 323.2 167 97.0
Nitab4.5_0000109g0180 Nicotiana tabacum HOM05D006875 ORTHO05D008416 7.4e-68 260.8 169 82.8
Nitab4.5_0005761g0030 Nicotiana tabacum HOM05D006875 ORTHO05D008416 2.2e-64 249.2 185 75.1
Peaxi162Scf00185g01627 Petunia axillaris HOM05D006875 ORTHO05D008416 1.2e-62 243.4 169 78.7
SGA_v2.0_scaffold144G35866 Striga asiatica HOM05D006875 ORTHO05D008416 5.7e-52 208.0 172 66.3
Migut.E01333 Erythranthe guttata HOM05D006875 ORTHO05D008416 8.2e-51 204.1 171 65.5
Cc08_g04080 Coffea canephora HOM05D006875 ORTHO05D008416 3.8e-48 195.3 169 66.9
MSTRG.13901 Avicennia marina HOM05D006875 ORTHO05D008416 1.6e-46 189.9 176 63.1
SalBow4G1271 Salvia bowleyana HOM05D006875 ORTHO05D008416 2.1e-46 189.5 169 65.1
Actinidia14761 Actinidia chinensis HOM05D006875 ORTHO05D008416 1.0e-45 187.2 176 58.5
Dinv29039 Davidia involucrata HOM05D006875 ORTHO05D008416 4.4e-44 181.8 170 59.4
Actinidia18144 Actinidia chinensis HOM05D006875 ORTHO05D008416 1.3e-43 180.3 176 57.4
CSS0027486 Camellia sinensis var. sinensis HOM05D006875 ORTHO05D008416 1.8e-42 176.4 185 55.7
CiPaw.12G070200 Carya illinoinensis HOM05D006875 ORTHO05D008416 9.4e-39 164.1 173 56.1
HanXRQChr16g0510981 Helianthus annuus HOM05D006875 ORTHO05D008416 9.4e-39 164.1 178 59.0
Duzib205G1866 Durio zibethinus HOM05D006875 ORTHO05D008416 3.6e-38 162.2 174 59.2
AT5G45590 Arabidopsis thaliana HOM05D006875 ORTHO05D008416 2.3e-37 159.5 173 53.8
Sed0011128 Sechium edule HOM05D006875 ORTHO05D008416 2.3e-37 159.5 177 55.9
THA.LOC104806179 Tarenaya hassleriana HOM05D006875 ORTHO05D008416 6.7e-37 157.9 178 56.7
AL8G13090 Arabidopsis lyrata HOM05D006875 ORTHO05D008416 1.5e-36 156.8 172 54.7
Potri.001G133600 Populus trichocarpa HOM05D006875 ORTHO05D008416 1.5e-36 156.8 178 54.5
Sp2g10480 Schrenkiella parvula HOM05D006875 ORTHO05D008416 1.5e-36 156.8 171 55.6
BcaC03g16779 Brassica carinata HOM05D006875 ORTHO05D008416 5.7e-36 154.8 168 56.5
BolC2t10706H Brassica oleracea HOM05D006875 ORTHO05D008416 5.7e-36 154.8 168 56.5
Lalb_Chr16g0380861 Lupinus albus HOM05D006875 ORTHO05D008416 7.5e-36 154.5 176 56.2
Oeu044464.1 Olea europaea HOM05D006875 ORTHO05D008416 7.5e-36 154.5 93 87.1
A06p46520 Brassica napus HOM05D006875 ORTHO05D008416 9.7e-36 154.1 168 56.0
BraA06t27526Z Brassica rapa HOM05D006875 ORTHO05D008416 9.7e-36 154.1 168 56.0
CARHR176440 Cardamine hirsuta HOM05D006875 ORTHO05D008416 2.2e-35 152.9 173 54.3
BolC7t43404H Brassica oleracea HOM05D006875 ORTHO05D008416 4.8e-35 151.8 168 55.4
Carub.0008s0244 Capsella rubella HOM05D006875 ORTHO05D008416 8.2e-35 151.0 173 53.8
unitig_0.g2213 Utricularia gibba HOM05D006875 ORTHO05D008416 1.8e-34 149.8 168 56.5
BcaC06g34424 Brassica carinata HOM05D006875 ORTHO05D008416 2.4e-34 149.4 168 54.8
C07p28660 Brassica napus HOM05D006875 ORTHO05D008416 2.4e-34 149.4 168 54.8
Thhalv10001052m.g Eutrema salsugineum HOM05D006875 ORTHO05D008416 2.4e-34 149.4 174 54.0
C02p46480 Brassica napus HOM05D006875 ORTHO05D008416 4.1e-34 148.7 168 55.4
BcaC06g31539 Brassica carinata HOM05D006875 ORTHO05D008416 5.3e-34 148.3 168 53.6
Aa31LG9G7450 Aethionema arabicum HOM05D006875 ORTHO05D008416 9.1e-34 147.5 173 54.9
arahy.Tifrunner.gnm1.ann1.7H2E39 Arachis hypogaea HOM05D006875 ORTHO05D008416 2.0e-33 146.4 177 53.7
arahy.Tifrunner.gnm1.ann1.J2I619 Arachis hypogaea HOM05D006875 ORTHO05D008416 2.0e-33 146.4 177 53.7
EL10Ac5g11986 Beta vulgaris HOM05D006875 ORTHO05D008416 4.5e-33 145.2 176 51.1
Duzib068G0693 Durio zibethinus HOM05D006875 ORTHO05D008416 7.7e-33 144.4 169 53.8
Lalb_Chr05g0215561 Lupinus albus HOM05D006875 ORTHO05D008416 7.7e-33 144.4 177 55.4
Medtr5g027470 Medicago truncatula HOM05D006875 ORTHO05D008416 1.3e-32 143.7 171 51.5
Nn1g01960 Nelumbo nucifera HOM05D006875 ORTHO05D008416 1.7e-32 143.3 174 52.3
Sabra01G0103300 Salix brachista HOM05D006875 ORTHO05D008416 2.2e-32 142.9 211 46.4
Hma1.2p1_0979F.1_g243510 Hydrangea macrophylla HOM05D006875 ORTHO05D008416 2.9e-32 142.5 173 49.7
Sc01g0006090 Simmondsia chinensis HOM05D006875 ORTHO05D008416 3.8e-32 142.1 170 52.4
Ca_25148_v3 Cicer arietinum L. HOM05D006875 ORTHO05D008416 6.5e-32 141.4 170 52.9
Hund14386 Selenicereus undatus HOM05D006875 ORTHO05D008416 1.1e-31 140.6 176 50.6
GSVIVG01011544001 Vitis vinifera HOM05D006875 ORTHO05D008416 1.9e-31 139.8 147 55.8
Ah.12g055650 Amaranthus hybridus HOM05D006875 ORTHO05D008416 9.4e-31 137.5 179 49.2
Glyma.01G009800 Glycine max HOM05D006875 ORTHO05D008416 1.2e-30 137.1 175 52.0
Prupe.5G024300 Prunus persica HOM05D006875 ORTHO05D008416 1.2e-30 137.1 173 49.1
RcHm_v2.0_Chr7g0212891 Rosa chinensis HOM05D006875 ORTHO05D008416 1.2e-30 137.1 174 52.3
TPR.G9090 Trifolium pratense HOM05D006875 ORTHO05D008416 3.6e-30 135.6 170 51.8
A02p29280 Brassica napus HOM05D006875 ORTHO05D008416 8.0e-30 134.4 167 52.1
BraA02t07958Z Brassica rapa HOM05D006875 ORTHO05D008416 8.0e-30 134.4 167 52.1
VMungo1215G2146 Vigna mungo HOM05D006875 ORTHO05D008416 8.0e-30 134.4 166 53.6
Cfa012555 Carpinus fangiana HOM05D006875 ORTHO05D008416 1.4e-29 133.7 175 52.0
CsaV3_3G030390 Cucumis sativus L. HOM05D006875 ORTHO05D008416 1.4e-29 133.7 178 48.9
TAR629G1490 Trochodendron aralioides HOM05D006875 ORTHO05D008416 1.4e-29 133.7 173 50.3
MELO3C022766.2 Cucumis melo HOM05D006875 ORTHO05D008416 1.8e-29 133.3 176 48.9
Gohir.D08G173100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 3.0e-29 132.5 172 51.7
Glyma.09G211300 Glycine max HOM05D006875 ORTHO05D008416 5.2e-29 131.7 174 52.3
CDE05G0418 Ceratophyllum demersum HOM05D006875 ORTHO05D008416 4.4e-28 128.6 177 46.9
Eucgr.D02619 Eucalyptus grandis HOM05D006875 ORTHO05D008416 4.4e-28 128.6 180 50.6
Atru.chr6.1576 Acer truncatum HOM05D006875 ORTHO05D008416 4.8e-27 125.2 182 45.1
Phvul.002G132700 Phaseolus vulgaris HOM05D006875 ORTHO05D008416 4.8e-27 125.2 174 50.6
Potri.003G099900 Populus trichocarpa HOM05D006875 ORTHO05D008416 1.8e-26 123.2 176 46.6
Lj2g0021598 Lotus japonicus HOM05D006875 ORTHO05D008416 4.1e-26 122.1 171 46.8
PSO782G2435 Papaver somniferum HOM05D006875 ORTHO05D008416 9.1e-26 120.9 170 50.6
PSO063G1678 Papaver somniferum HOM05D006875 ORTHO05D008416 1.6e-25 120.2 170 50.0
vmacro14218 Vaccinium macrocarpon HOM05D006875 ORTHO05D008416 2.0e-25 119.8 249 36.5
Ciclev10002495m.g Citrus clementina HOM05D006875 ORTHO05D008416 1.3e-24 117.1 176 46.6
TWI23G0606 Tripterygium wilfordii HOM05D006875 ORTHO05D008416 1.3e-24 117.1 176 43.8
Os10g0579500 Oryza sativa ssp. japonica HOM05D006875 ORTHO05D008416 2.5e-23 112.8 92 68.5
Zm00001eb025290 Zea mays HOM05D006875 ORTHO05D008416 2.5e-23 112.8 92 67.4
Cpa.g.c33846 Carica papaya HOM05D006875 ORTHO05D008416 5.5e-23 111.7 142 52.8
FAN13G1224 Fragaria x ananassa HOM05D006875 ORTHO05D008416 5.5e-23 111.7 176 44.9
Aqoxy3G02082 Aquilegia oxysepala HOM05D006875 ORTHO05D008416 2.1e-22 109.8 176 47.2
Thecc.03G314400 Theobroma cacao HOM05D006875 ORTHO05D008416 3.6e-22 109.0 175 46.3
FAN04G1681 Fragaria x ananassa HOM05D006875 ORTHO05D008416 4.7e-22 108.6 179 43.0
FvH4_5g23590 Fragaria vesca HOM05D006875 ORTHO05D008416 6.1e-22 108.2 176 43.2
FAN18G3946 Fragaria x ananassa HOM05D006875 ORTHO05D008416 6.1e-22 108.2 176 43.2
FAN18G3512 Fragaria x ananassa HOM05D006875 ORTHO05D008416 8.0e-22 107.8 176 43.2
Manes.17G011100 Manihot esculenta HOM05D006875 ORTHO05D008416 8.0e-22 107.8 62 83.9
CANSAT21G2454 Cannabis sativa HOM05D006875 ORTHO05D008416 1.8e-21 106.7 176 44.9
FAN08G3065 Fragaria x ananassa HOM05D006875 ORTHO05D008416 1.8e-21 106.7 179 43.0
Sabra03G0067900 Salix brachista HOM05D006875 ORTHO05D008416 6.8e-21 104.8 121 49.6
Psat2g139680 Pisum sativum HOM05D006875 ORTHO05D008416 8.8e-21 104.4 147 45.6
Gohir.A08G152100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 2.6e-20 102.8 168 45.2
Lsat_1_v5_gn_3_43041 Lactuca sativa HOM05D006875 ORTHO05D008416 4.4e-20 102.1 186 43.0
ClCG07G002300 Citrullus lanatus HOM05D006875 ORTHO05D008416 2.8e-19 99.4 147 44.9
Rhsim07G0136500 Rhododendron simsii HOM05D006875 ORTHO05D008416 8.3e-19 97.8 151 43.7
ECA233G1303 Erigeron canadensis HOM05D000321 ORTHO05D000204 3.1e-18 95.9 66 72.7
COL.COLO4_16883 Corchorus olitorius HOM05D006875 ORTHO05D008416 1.2e-17 94.0 55 85.5
Haze_08105 Corylus avellana HOM05D006875 ORTHO05D008416 2.0e-17 93.2 65 70.8
MD00G1000200 Malus domestica HOM05D006875 ORTHO05D008416 2.7e-17 92.8 173 40.5
Haze_08111 Corylus avellana HOM05D006875 ORTHO05D008416 3.5e-17 92.4 152 45.4
Gorai.004G180500 Gossypium raimondii HOM05D006875 ORTHO05D008416 2.3e-16 89.7 168 42.3
HPP92_025490 Vanilla planifolia HOM05D006875 ORTHO05D008416 1.9e-15 86.7 174 39.7
Mapoly0025s0027 Marchantia polymorpha HOM05D006875 ORTHO05D008416 9.5e-15 84.3 67 62.7
QL12p000430 Quercus lobata HOM05D006875 ORTHO05D008416 9.5e-15 84.3 150 40.7
CDE11G0569 Ceratophyllum demersum HOM05D006875 ORTHO05D008416 1.6e-14 83.6 145 40.0
Pp3c9_12060 Physcomitrium patens HOM05D006875 ORTHO05D008416 2.1e-14 83.2 67 61.2
ATR0829G201 Amborella trichopoda HOM05D006875 ORTHO05D008416 5.7e-12 75.1 64 60.9
PGR031G1815 Punica granatum HOM05D006875 ORTHO05D008416 9.8e-12 74.3 137 40.9
SHI45156 Sapria himalayana HOM05D006875 ORTHO05D008416 2.2e-11 73.2 76 52.6
SGA_v2.0_scaffold111G31380 Striga asiatica HOM05D006875 ORTHO05D008416 1.1e-10 70.9 143 37.8
DCAR_004255 Daucus carota HOM05D049898 ORTHO05D008416 1.4e-10 70.5 109 49.5
AagrBONN_evm.TU.Sc2ySwM_362.254 Anthoceros agrestis HOM05D006875 ORTHO05D008416 1.8e-10 70.1 67 56.7
RcHm_v2.0_Chr1g0382651 Rosa chinensis HOM05D006875 ORTHO05D008416 2.4e-10 69.7 45 71.1
SEGI_22250 Sequoiadendron giganteum HOM05D006875 ORTHO05D008416 3.0e-08 62.8 70 52.9


User provided reference genes

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