Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g065073.1 Solanum lycopersicum HOM05D008200 ORTHO05D007342 5.9e-42 173.7 84 100.0
Sopen06g023600 Solanum pennellii HOM05D008200 ORTHO05D010849 5.9e-42 173.7 84 100.0
PGSC0003DMG400031328 Solanum tuberosum HOM05D008200 ORTHO05D007342 1.4e-38 162.5 82 96.3
Peaxi162Scf00268g00024 Petunia axillaris HOM05D008200 ORTHO05D007342 4.7e-31 137.5 82 82.9
Nitab4.5_0006133g0030 Nicotiana tabacum HOM05D008200 ORTHO05D007342 4.9e-28 127.5 82 75.6
Peaxi162Scf00391g00730 Petunia axillaris HOM05D008200 ORTHO05D007342 2.2e-20 102.1 80 63.8
Peaxi162Scf00071g00049 Petunia axillaris HOM05D008200 ORTHO05D007342 3.7e-20 101.3 80 58.8
PGSC0003DMG400024067 Solanum tuberosum HOM05D008200 ORTHO05D007342 1.4e-19 99.4 80 58.8
PGSC0003DMG400024075 Solanum tuberosum HOM05D008200 ORTHO05D007342 1.4e-19 99.4 80 60.0
Peaxi162Scf00391g00729 Petunia axillaris HOM05D008200 ORTHO05D007342 2.7e-18 95.1 81 60.5
Solyc03g031895.1 Solanum lycopersicum HOM05D008200 ORTHO05D007342 3.5e-18 94.7 80 57.5
CAN.G508.19 Capsicum annuum HOM05D008200 ORTHO05D007342 5.1e-17 90.9 82 50.0
Nitab4.5_0005382g0020 Nicotiana tabacum HOM05D008200 ORTHO05D007342 5.1e-17 90.9 81 55.6
CAN.G201.40 Capsicum annuum HOM05D008200 ORTHO05D007342 6.6e-17 90.5 81 56.8
PGSC0003DMG400002110 Solanum tuberosum HOM05D008200 ORTHO05D007342 6.6e-17 90.5 81 56.8
Peaxi162Scf00071g00435 Petunia axillaris HOM05D008200 ORTHO05D010849 1.5e-16 89.4 63 60.3
Peaxi162Scf00391g00728 Petunia axillaris HOM05D008200 ORTHO05D010849 4.3e-16 87.8 83 54.2
Peaxi162Scf00071g00425 Petunia axillaris HOM05D008200 ORTHO05D007342 5.6e-16 87.4 81 55.6
Peaxi162Scf00798g00320 Petunia axillaris HOM05D008200 ORTHO05D007342 1.2e-15 86.3 83 53.0
CAN.G201.41 Capsicum annuum HOM05D008200 ORTHO05D007342 4.7e-15 84.3 70 57.1
Peaxi162Scf00391g00074 Petunia axillaris HOM05D008200 ORTHO05D007342 1.1e-14 83.2 66 54.5
Solyc03g020050.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 1.1e-14 83.2 56 62.5
Sopen03g029570 Solanum pennellii HOM05D008200 ORTHO05D010849 1.1e-14 83.2 56 62.5
CAN.G2197.1 Capsicum annuum HOM05D008200 ORTHO05D010849 2.4e-14 82.0 56 62.5
Nitab4.5_0014015g0010 Nicotiana tabacum HOM05D008200 ORTHO05D010849 3.1e-14 81.6 80 51.2
Solyc06g061210.4 Solanum lycopersicum HOM05D001063 ORTHO05D000986 5.2e-14 80.9 72 58.3
Sopen11g011140 Solanum pennellii HOM05D008200 ORTHO05D010849 1.5e-13 79.3 75 46.7
PGSC0003DMG400015290 Solanum tuberosum HOM05D008200 ORTHO05D010849 1.5e-13 79.3 56 57.1
Solyc03g020060.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 2.0e-13 79.0 56 60.7
Sopen03g029540 Solanum pennellii HOM05D008200 ORTHO05D010849 3.4e-13 78.2 56 60.7
PGSC0003DMG400015289 Solanum tuberosum HOM05D008200 ORTHO05D010849 9.9e-13 76.6 56 60.7
PGSC0003DMG400039762 Solanum tuberosum HOM05D008200 ORTHO05D010849 1.3e-12 76.3 68 48.5
CAN.G861.41 Capsicum annuum HOM05D008200 ORTHO05D010849 2.2e-12 75.5 57 52.6
PGSC0003DMG400004548 Solanum tuberosum HOM05D008200 ORTHO05D010849 2.2e-12 75.5 56 58.9
Solyc11g020990.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 2.9e-12 75.1 80 46.2
Nitab4.5_0004437g0040 Nicotiana tabacum HOM05D008200 ORTHO05D010849 3.8e-12 74.7 65 49.2
Cc10_g10210 Coffea canephora HOM05D007628 ORTHO05D007342 1.4e-11 72.8 82 47.6
Nitab4.5_0010009g0010 Nicotiana tabacum HOM05D008200 ORTHO05D010849 2.4e-11 72.0 65 46.2
Solyc03g020030.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 4.1e-11 71.2 56 51.8
Solyc03g020040.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 4.1e-11 71.2 56 51.8
Solyc11g020960.2 Solanum lycopersicum HOM05D008200 ORTHO05D010849 4.1e-11 71.2 81 44.4
Sopen03g029600 Solanum pennellii HOM05D008200 ORTHO05D010849 4.1e-11 71.2 56 51.8
PGSC0003DMG400018328 Solanum tuberosum HOM05D008200 ORTHO05D007342 9.2e-11 70.1 79 46.8
Nitab4.5_0003324g0100 Nicotiana tabacum HOM05D008200 ORTHO05D010849 1.2e-10 69.7 56 53.6
Nitab4.5_0005255g0020 Nicotiana tabacum HOM05D008200 ORTHO05D010849 1.2e-10 69.7 66 48.5
CAN.G861.42 Capsicum annuum HOM05D008200 ORTHO05D010849 1.6e-10 69.3 58 50.0
Peaxi162Scf00391g00620 Petunia axillaris HOM05D008200 ORTHO05D010849 1.6e-10 69.3 89 42.7
Cc00_g22140 Coffea canephora HOM05D007628 ORTHO05D007342 2.1e-10 68.9 71 49.3
Nitab4.5_0000363g0010 Nicotiana tabacum HOM05D008200 ORTHO05D010849 2.1e-10 68.9 56 51.8
PGSC0003DMG400009267 Solanum tuberosum HOM05D008200 ORTHO05D010849 2.1e-10 68.9 81 44.4
Solyc11g021060.2 Solanum lycopersicum HOM05D008200 ORTHO05D010849 1.0e-09 66.6 80 43.8
Lalb_Chr25g0283251 Lupinus albus HOM05D007628 ORTHO05D007342 1.7e-09 65.9 78 41.0
Sopen07g028650 Solanum pennellii HOM05D008200 ORTHO05D010849 1.7e-09 65.9 79 44.3
PGSC0003DMG400015287 Solanum tuberosum HOM05D008200 ORTHO05D010849 2.3e-09 65.5 56 46.4
Psat7g225960 Pisum sativum HOM05D007628 ORTHO05D007342 3.0e-09 65.1 78 37.2
Solyc03g020070.4 Solanum lycopersicum HOM05D008200 ORTHO05D010849 6.6e-09 63.9 67 43.3
CAN.G861.46 Capsicum annuum HOM05D008200 ORTHO05D010849 8.7e-09 63.5 65 38.5
Haze_21289 Corylus avellana HOM05D017027 ORTHO05D007342 1.1e-08 63.2 65 41.5
Solyc07g054720.2 Solanum lycopersicum HOM05D008200 ORTHO05D007342 1.1e-08 63.2 79 41.8
TPR.G34119 Trifolium pratense HOM05D007628 ORTHO05D007342 1.1e-08 63.2 78 38.5
Sopen03g029580 Solanum pennellii HOM05D008200 ORTHO05D010849 1.5e-08 62.8 57 43.9
TPR.G34134 Trifolium pratense HOM05D007628 ORTHO05D007342 1.5e-08 62.8 75 40.0
Migut.C01297 Erythranthe guttata HOM05D007628 ORTHO05D007342 3.3e-08 61.6 81 42.0
Psat7g226000 Pisum sativum HOM05D007628 ORTHO05D007342 4.3e-08 61.2 74 36.5
PGSC0003DMG400030593 Solanum tuberosum HOM05D008200 ORTHO05D010849 4.3e-08 61.2 80 42.5
Psat7g225880 Pisum sativum HOM05D007628 ORTHO05D007342 1.6e-07 59.3 78 37.2
PGSC0003DMG400009268 Solanum tuberosum HOM05D008200 ORTHO05D010849 1.6e-07 59.3 80 40.0
Sopen11g011150 Solanum pennellii HOM05D008200 ORTHO05D010849 2.1e-07 58.9 62 40.3
Prupe.1G552700 Prunus persica HOM05D007628 ORTHO05D007342 3.6e-07 58.2 74 40.5
Lj4g0001077 Lotus japonicus HOM05D007628 ORTHO05D007342 4.7e-07 57.8 76 40.8
Sopen03g029560 Solanum pennellii HOM05D008200 ORTHO05D010849 4.7e-07 57.8 82 39.0
Actinidia25283 Actinidia chinensis HOM05D007628 ORTHO05D007342 1.1e-06 56.6 75 45.3
Hund02181 Selenicereus undatus HOM05D007628 ORTHO05D007342 1.4e-06 56.2 72 48.6
PGSC0003DMG400004547 Solanum tuberosum HOM05D008200 ORTHO05D010849 1.4e-06 56.2 68 39.7
Sopen03g029530 Solanum pennellii HOM05D008200 ORTHO05D010849 1.8e-06 55.8 67 40.3
Nitab4.5_0007796g0010 Nicotiana tabacum HOM05D008200 ORTHO05D010849 2.4e-06 55.5 25 96.0
Solyc03g020080.4 Solanum lycopersicum HOM05D008200 ORTHO05D010849 3.1e-06 55.1 82 37.8
Eucgr.F03003 Eucalyptus grandis HOM05D007628 ORTHO05D007342 5.2e-06 54.3 81 45.7


User provided reference genes

Program Settings