Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g063390.3 Solanum lycopersicum HOM05D008218 ORTHO05D010347 4.1e-19 97.1 49 100.0
Solyc06g063400.3 Solanum lycopersicum HOM05D008218 ORTHO05D010347 5.0e-17 90.1 49 91.8
Prupe.8G198600 Prunus persica HOM05D008218 ORTHO05D010347 3.6e-15 84.0 49 89.8
Phvul.008G131550 Phaseolus vulgaris HOM05D008218 ORTHO05D010347 4.7e-15 83.6 49 87.8
Hma1.2p1_0149F.1_g066410 Hydrangea macrophylla HOM05D008218 ORTHO05D010347 8.0e-15 82.8 49 87.8
RcHm_v2.0_Chr6g0284071 Rosa chinensis HOM05D008218 ORTHO05D010347 8.0e-15 82.8 49 87.8
TWI36G0894 Tripterygium wilfordii HOM05D008218 ORTHO05D010347 2.0e-13 78.2 49 83.7
Lsat_1_v5_gn_2_120021 Lactuca sativa HOM05D009582 ORTHO05D010347 1.7e-12 75.1 48 79.2
FAN27G2427 Fragaria x ananassa HOM05D008218 ORTHO05D010347 2.2e-12 74.7 44 86.4
FAN15G3347 Fragaria x ananassa HOM05D008218 ORTHO05D010347 4.9e-12 73.6 44 84.1
Thhalv10021897m.g Eutrema salsugineum HOM05D008218 ORTHO05D010347 6.4e-12 73.2 49 81.6
PGSC0003DMG400007753 Solanum tuberosum HOM05D008218 ORTHO05D010347 6.4e-12 73.2 45 86.7
AL3G18510 Arabidopsis lyrata HOM05D008218 ORTHO05D010347 8.3e-12 72.8 49 81.6
AT3G07230 Arabidopsis thaliana HOM05D008218 ORTHO05D010347 8.3e-12 72.8 49 81.6
Carub.0003s0676 Capsella rubella HOM05D008218 ORTHO05D010347 1.4e-11 72.0 49 81.6
FAN24G2161 Fragaria x ananassa HOM05D008218 ORTHO05D010347 1.4e-11 72.0 68 60.3
COL.COLO4_08652 Corchorus olitorius HOM05D008218 ORTHO05D010347 2.4e-11 71.2 49 81.6
Nitab4.5_0013864g0040 Nicotiana tabacum HOM05D008218 ORTHO05D010347 2.4e-11 71.2 48 81.2
CARHR081880 Cardamine hirsuta HOM05D008218 ORTHO05D010347 3.2e-11 70.9 49 79.6
Aa31LG5G17820 Aethionema arabicum HOM05D008218 ORTHO05D010347 4.1e-11 70.5 49 79.6
Gohir.A07G161100 Gossypium hirsutum HOM05D008218 ORTHO05D010347 4.1e-11 70.5 49 79.6
Gohir.D07G164600 Gossypium hirsutum HOM05D008218 ORTHO05D010347 4.1e-11 70.5 49 79.6
Potri.002G246300 Populus trichocarpa HOM05D008218 ORTHO05D010347 4.1e-11 70.5 49 79.6
Gohir.D11G145833 Gossypium hirsutum HOM05D008218 ORTHO05D010347 9.2e-11 69.3 49 79.6
Mapoly0087s0005 Marchantia polymorpha HOM05D008218 ORTHO05D010347 9.2e-11 69.3 49 75.5
Thecc.01G219400 Theobroma cacao HOM05D008218 ORTHO05D010347 9.2e-11 69.3 49 79.6
CiPaw.13G048900 Carya illinoinensis HOM05D008218 ORTHO05D010347 1.2e-10 68.9 49 77.6
TWI18G1398 Tripterygium wilfordii HOM05D008218 ORTHO05D010347 1.2e-10 68.9 49 77.6
CsaV3_3G030050 Cucumis sativus L. HOM05D008218 ORTHO05D010347 2.7e-10 67.8 48 70.8
Nn7g36571 Nelumbo nucifera HOM05D008218 ORTHO05D010347 2.7e-10 67.8 49 77.6
TWI75G0809 Tripterygium wilfordii HOM05D008218 ORTHO05D010347 2.7e-10 67.8 49 77.6
Duzib211G0660 Durio zibethinus HOM05D008218 ORTHO05D010347 4.6e-10 67.0 49 77.6
THA.LOC104818972 Tarenaya hassleriana HOM05D008218 ORTHO05D010347 7.8e-10 66.2 49 77.6
THA.LOC104822489 Tarenaya hassleriana HOM05D008218 ORTHO05D010347 7.8e-10 66.2 49 77.6
CAN.G874.7 Capsicum annuum HOM05D008218 ORTHO05D010347 1.0e-09 65.9 49 77.6
Solyc06g083340.3 Solanum lycopersicum HOM05D008218 ORTHO05D010347 1.0e-09 65.9 49 77.6
PGSC0003DMG400020101 Solanum tuberosum HOM05D008218 ORTHO05D010347 1.0e-09 65.9 49 77.6
Lalb_Chr19g0125871 Lupinus albus HOM05D008218 ORTHO05D010347 1.3e-09 65.5 49 73.5
Manes.12G047600 Manihot esculenta HOM05D008218 ORTHO05D010347 1.3e-09 65.5 49 73.5
Migut.D02504 Erythranthe guttata HOM05D008218 ORTHO05D010347 3.9e-09 63.9 49 75.5
Hund18437 Selenicereus undatus HOM05D008218 ORTHO05D010347 3.9e-09 63.9 49 75.5
Potri.014G191300 Populus trichocarpa HOM05D008218 ORTHO05D010347 5.0e-09 63.5 49 73.5
Os12g0405700 Oryza sativa ssp. japonica HOM05D008218 ORTHO05D010347 6.6e-09 63.2 49 69.4
EL10Ac7g17908 Beta vulgaris HOM05D008218 ORTHO05D010347 8.6e-09 62.8 48 72.9
A03p35150 Brassica napus HOM05D008218 ORTHO05D010347 8.6e-09 62.8 49 75.5
Hma1.2p1_0226F.1_g095360 Hydrangea macrophylla HOM05D008218 ORTHO05D010347 8.6e-09 62.8 49 73.5
PSO017G0111 Papaver somniferum HOM05D008218 ORTHO05D010347 8.6e-09 62.8 49 71.4
PSO170G1121 Papaver somniferum HOM05D008218 ORTHO05D010347 8.6e-09 62.8 49 71.4
PSO170G3918 Papaver somniferum HOM05D008218 ORTHO05D010347 8.6e-09 62.8 49 71.4
Thecc.05G251000 Theobroma cacao HOM05D008218 ORTHO05D010347 1.1e-08 62.4 49 71.4
PGR044G2382 Punica granatum HOM05D008218 ORTHO05D010347 1.5e-08 62.0 49 73.5
Duzib133G0946 Durio zibethinus HOM05D008218 ORTHO05D010347 1.9e-08 61.6 49 73.5
Manes.13G049700 Manihot esculenta HOM05D008218 ORTHO05D010347 1.9e-08 61.6 49 73.5
PSO357G0222 Papaver somniferum HOM05D008218 ORTHO05D010347 3.3e-08 60.8 49 69.4
Gohir.A07G093000 Gossypium hirsutum HOM05D008218 ORTHO05D010347 4.3e-08 60.5 49 71.4
CiPaw.14G038700 Carya illinoinensis HOM05D008218 ORTHO05D010347 5.6e-08 60.1 49 69.4
BcaC05g29851 Brassica carinata HOM05D003583 ORTHO05D004169 7.3e-08 59.7 49 73.5
BraA05t22826Z Brassica rapa HOM05D003583 ORTHO05D004169 1.6e-07 58.5 49 71.4
Gohir.A11G139700 Gossypium hirsutum HOM05D008218 ORTHO05D010347 2.8e-07 57.8 49 71.4
MELO3C029169.2 Cucumis melo HOM05D008218 ORTHO05D010347 3.6e-07 57.4 44 75.0
Glyma.18G159800 Glycine max HOM05D008218 ORTHO05D010347 6.2e-07 56.6 49 67.3
Nitab4.5_0003020g0060 Nicotiana tabacum HOM05D008218 ORTHO05D010347 6.2e-07 56.6 32 90.6
Pp3c23_15470 Physcomitrium patens HOM05D008218 ORTHO05D010347 1.8e-06 55.1 49 57.1
Pp3c20_8300 Physcomitrium patens HOM05D008218 ORTHO05D010347 2.3e-06 54.7 50 66.0
Glyma.08G348200 Glycine max HOM05D008218 ORTHO05D010347 3.1e-06 54.3 49 65.3


User provided reference genes

Program Settings