Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g063130.3 Solanum lycopersicum HOM05D004903 ORTHO05D005849 1.0e-151 540.0 277 100.0
Sopen06g022580 Solanum pennellii HOM05D004903 ORTHO05D005849 2.8e-149 531.9 277 98.6
PGSC0003DMG400004869 Solanum tuberosum HOM05D004903 ORTHO05D005849 7.2e-145 517.3 277 94.6
CAN.G1633.2 Capsicum annuum HOM05D004903 ORTHO05D005849 3.2e-124 448.7 277 81.2
Nitab4.5_0006190g0020 Nicotiana tabacum HOM05D004903 ORTHO05D005849 4.3e-121 438.3 277 80.1
Peaxi162Scf00207g01534 Petunia axillaris HOM05D004903 ORTHO05D005849 2.2e-117 426.0 277 77.6
Nitab4.5_0010570g0050 Nicotiana tabacum HOM05D004903 ORTHO05D005849 1.2e-99 367.1 277 71.1
CSS0022789 Camellia sinensis var. sinensis HOM05D004903 ORTHO05D005849 3.3e-97 359.0 278 65.1
Dinv20374 Davidia involucrata HOM05D004903 ORTHO05D005849 3.1e-95 352.4 280 62.9
Actinidia24416 Actinidia chinensis HOM05D004903 ORTHO05D005849 8.4e-93 344.4 285 61.1
Actinidia25997 Actinidia chinensis HOM05D004903 ORTHO05D005849 1.9e-92 343.2 278 62.9
Migut.I01143 Erythranthe guttata HOM05D004903 ORTHO05D005849 6.0e-91 338.2 278 62.9
Manes.11G011500 Manihot esculenta HOM05D004903 ORTHO05D005849 3.3e-89 332.4 278 61.2
THA.LOC104810400 Tarenaya hassleriana HOM05D004903 ORTHO05D005849 2.4e-87 326.2 277 62.5
DCAR_022636 Daucus carota HOM05D004903 ORTHO05D005849 6.9e-87 324.7 284 59.5
Atru.chr1.4170 Acer truncatum HOM05D004903 ORTHO05D005849 9.0e-87 324.3 276 59.8
Lj5A28T47 Lonicera japonica HOM05D004903 ORTHO05D005849 9.0e-87 324.3 336 52.1
TAR624G0709 Trochodendron aralioides HOM05D004903 ORTHO05D005849 9.0e-87 324.3 280 58.9
Potri.001G161800 Populus trichocarpa HOM05D004903 ORTHO05D005849 1.2e-86 323.9 281 60.1
RcHm_v2.0_Chr2g0148141 Rosa chinensis HOM05D004903 ORTHO05D005849 1.2e-86 323.9 289 58.5
MSTRG.10905 Avicennia marina HOM05D004903 ORTHO05D005849 2.6e-86 322.8 284 57.4
Lj3g0025901 Lotus japonicus HOM05D004903 ORTHO05D005849 3.4e-86 322.4 278 59.0
QL05p000658 Quercus lobata HOM05D004903 ORTHO05D005849 3.4e-86 322.4 280 61.1
GSVIVG01016657001 Vitis vinifera HOM05D004903 ORTHO05D005849 3.4e-86 322.4 277 58.1
Prupe.3G030200 Prunus persica HOM05D004903 ORTHO05D005849 4.4e-86 322.0 279 59.9
FAN14G1686 Fragaria x ananassa HOM05D004903 ORTHO05D005849 5.8e-86 321.6 289 58.5
CiPaw.01G210600 Carya illinoinensis HOM05D004903 ORTHO05D005849 7.6e-86 321.2 278 61.5
FAN14G0435 Fragaria x ananassa HOM05D004903 ORTHO05D005849 7.6e-86 321.2 285 59.3
SalBow6G3230 Salvia bowleyana HOM05D004903 ORTHO05D005849 9.9e-86 320.9 276 60.1
FAN09G2808 Fragaria x ananassa HOM05D004903 ORTHO05D005849 1.7e-85 320.1 289 58.1
TWI59G0350 Tripterygium wilfordii HOM05D004903 ORTHO05D005849 1.7e-85 320.1 283 58.0
QL05p000751 Quercus lobata HOM05D004903 ORTHO05D005849 2.2e-85 319.7 282 60.6
FAN02G0327 Fragaria x ananassa HOM05D004903 ORTHO05D005849 8.4e-85 317.8 285 58.9
Hund18627 Selenicereus undatus HOM05D004903 ORTHO05D005849 8.4e-85 317.8 275 60.4
Ciclev10026250m.g Citrus clementina HOM05D004903 ORTHO05D005849 1.4e-84 317.0 283 58.7
EL10Ac7g18248 Beta vulgaris HOM05D004903 ORTHO05D005849 1.9e-84 316.6 273 60.4
BolC6t36703H Brassica oleracea HOM05D004903 ORTHO05D005849 1.9e-84 316.6 274 61.3
MD09G1171800 Malus domestica HOM05D004903 ORTHO05D005849 2.4e-84 316.2 283 59.7
C06p15280 Brassica napus HOM05D004903 ORTHO05D005849 4.2e-84 315.5 274 60.9
FvH4_6g36070 Fragaria vesca HOM05D004903 ORTHO05D005849 4.2e-84 315.5 287 57.8
BcaB07g33303 Brassica carinata HOM05D004903 ORTHO05D005849 1.2e-83 313.9 274 60.2
BraA05t20686Z Brassica rapa HOM05D004903 ORTHO05D005849 1.2e-83 313.9 274 62.0
CARHR044070 Cardamine hirsuta HOM05D004903 ORTHO05D005849 1.2e-83 313.9 279 59.5
BcaC08g44129 Brassica carinata HOM05D004903 ORTHO05D005849 1.6e-83 313.5 274 60.9
Thhalv10011709m.g Eutrema salsugineum HOM05D004903 ORTHO05D005849 1.6e-83 313.5 283 57.6
A05p17920 Brassica napus HOM05D004903 ORTHO05D005849 2.7e-83 312.8 274 61.7
C06p09540 Brassica napus HOM05D004903 ORTHO05D005849 3.5e-83 312.4 274 60.9
BolC6t36028H Brassica oleracea HOM05D004903 ORTHO05D005849 3.5e-83 312.4 274 60.9
BcaC08g43554 Brassica carinata HOM05D004903 ORTHO05D005849 4.6e-83 312.0 274 60.2
CsaV3_7G033900 Cucumis sativus L. HOM05D004903 ORTHO05D005849 4.6e-83 312.0 284 58.5
vmacro18714 Vaccinium macrocarpon HOM05D004903 ORTHO05D005849 7.9e-83 311.2 277 57.0
BcaB02g10893 Brassica carinata HOM05D004903 ORTHO05D005849 1.3e-82 310.5 274 59.9
Duzib160G0805 Durio zibethinus HOM05D004903 ORTHO05D005849 1.3e-82 310.5 275 58.9
MD17G1155200 Malus domestica HOM05D004903 ORTHO05D005849 1.3e-82 310.5 285 58.6
Glyma.07G046600 Glycine max HOM05D004903 ORTHO05D005849 1.7e-82 310.1 278 57.9
Thecc.06G131400 Theobroma cacao HOM05D004903 ORTHO05D005849 1.7e-82 310.1 275 58.9
Eucgr.J02586 Eucalyptus grandis HOM05D004903 ORTHO05D005849 2.3e-82 309.7 279 58.1
A06p00790 Brassica napus HOM05D004903 ORTHO05D005849 3.0e-82 309.3 274 59.1
AT1G53760 Arabidopsis thaliana HOM05D004903 ORTHO05D005849 3.9e-82 308.9 277 59.2
BraA06t23313Z Brassica rapa HOM05D004903 ORTHO05D005849 3.9e-82 308.9 274 59.1
Medtr8g023500 Medicago truncatula HOM05D004903 ORTHO05D005849 5.1e-82 308.5 287 56.1
Psat4g164720 Pisum sativum HOM05D004903 ORTHO05D005849 6.6e-82 308.1 276 57.6
AUR62001391 Chenopodium quinoa HOM05D004903 ORTHO05D005849 1.1e-81 307.4 275 58.2
Gohir.A06G142500 Gossypium hirsutum HOM05D004903 ORTHO05D005849 1.9e-81 306.6 273 60.4
arahy.Tifrunner.gnm1.ann1.97GHXX Arachis hypogaea HOM05D004903 ORTHO05D005849 3.3e-81 305.8 280 57.9
Gorai.010G172600 Gossypium raimondii HOM05D004903 ORTHO05D005849 3.3e-81 305.8 273 60.4
AL1G62450 Arabidopsis lyrata HOM05D004903 ORTHO05D005849 4.3e-81 305.4 274 58.8
CANSAT56G0172 Cannabis sativa HOM05D004903 ORTHO05D005849 4.3e-81 305.4 279 56.6
Glyma.16G015600 Glycine max HOM05D004903 ORTHO05D005849 1.3e-80 303.9 280 57.9
ClCG09G001430 Citrullus lanatus HOM05D004903 ORTHO05D005849 1.6e-80 303.5 284 57.7
HanXRQChr12g0360041 Helianthus annuus HOM05D004903 ORTHO05D005849 1.6e-80 303.5 272 57.0
Lsat_1_v5_gn_5_137641 Lactuca sativa HOM05D004903 ORTHO05D005849 1.6e-80 303.5 268 56.7
PSO724G0850 Papaver somniferum HOM05D004903 ORTHO05D005849 4.8e-80 302.0 275 56.0
PSO135G0609 Papaver somniferum HOM05D004903 ORTHO05D005849 3.1e-79 299.3 275 55.3
Carub.0001s4303 Capsella rubella HOM05D004903 ORTHO05D005849 4.0e-79 298.9 274 57.3
Gorai.010G236300 Gossypium raimondii HOM05D004903 ORTHO05D005849 5.3e-79 298.5 273 57.9
Gohir.D06G202400 Gossypium hirsutum HOM05D004903 ORTHO05D005849 9.0e-79 297.7 273 57.9
unitig_32.g11002 Utricularia gibba HOM05D004903 ORTHO05D005849 1.2e-78 297.4 284 56.0
Sed0027894 Sechium edule HOM05D004903 ORTHO05D005849 1.5e-78 297.0 286 57.7
Lalb_Chr17g0343171 Lupinus albus HOM05D004903 ORTHO05D005849 2.6e-78 296.2 279 57.0
Nn8g38503 Nelumbo nucifera HOM05D004903 ORTHO05D005849 3.4e-78 295.8 277 57.4
Sp1g40280 Schrenkiella parvula HOM05D004903 ORTHO05D005849 5.8e-78 295.0 274 57.3
arahy.Tifrunner.gnm1.ann1.3XU7EE Arachis hypogaea HOM05D004903 ORTHO05D005849 7.6e-78 294.7 279 57.3
Cc04_g00600 Coffea canephora HOM05D004903 ORTHO05D005849 9.9e-78 294.3 285 53.7
arahy.Tifrunner.gnm1.ann1.HDKQ14 Arachis hypogaea HOM05D004903 ORTHO05D005849 1.3e-77 293.9 300 54.7
arahy.Tifrunner.gnm1.ann1.M9BVNS Arachis hypogaea HOM05D004903 ORTHO05D005849 1.7e-77 293.5 280 56.8
Rhsim08G0245600 Rhododendron simsii HOM05D004903 ORTHO05D005849 1.7e-77 293.5 231 64.5
arahy.Tifrunner.gnm1.ann1.AA2XIP Arachis hypogaea HOM05D004903 ORTHO05D005849 2.2e-77 293.1 283 54.8
Aqoxy7G00919 Aquilegia oxysepala HOM05D004903 ORTHO05D005849 3.8e-77 292.4 284 54.2
Sabra03G0044200 Salix brachista HOM05D004903 ORTHO05D005849 8.4e-77 291.2 305 52.5
Phvul.010G122300 Phaseolus vulgaris HOM05D004903 ORTHO05D005849 5.5e-76 288.5 277 56.0
Sc12g0011010 Simmondsia chinensis HOM05D004903 ORTHO05D005849 1.2e-75 287.3 263 57.4
arahy.Tifrunner.gnm1.ann1.ZQ2A8X Arachis hypogaea HOM05D004903 ORTHO05D005849 2.1e-75 286.6 299 53.8
Gohir.A06G194700 Gossypium hirsutum HOM05D004903 ORTHO05D005849 6.0e-75 285.0 273 55.7
SGA_v2.0_scaffold71G23946 Striga asiatica HOM05D004903 ORTHO05D005849 7.9e-75 284.6 285 54.7
Aa31LG10G1530 Aethionema arabicum HOM05D000070 ORTHO05D003301 2.3e-74 283.1 255 58.4
arahy.Tifrunner.gnm1.ann1.5Z4EMJ Arachis hypogaea HOM05D004903 ORTHO05D005849 5.1e-74 282.0 279 54.8
HPP92_000828 Vanilla planifolia HOM05D004903 ORTHO05D005849 6.7e-74 281.6 277 56.3
COL.COLO4_30880 Corchorus olitorius HOM05D004903 ORTHO05D005849 3.3e-73 279.3 221 65.6
Oeu053414.1 Olea europaea HOM05D004903 ORTHO05D005849 1.1e-71 274.2 233 58.4
Cpa.g.sc25.203 Carica papaya HOM05D004903 ORTHO05D005849 1.8e-71 273.5 187 72.7
MELO3C024303.2 Cucumis melo HOM05D004903 ORTHO05D005849 6.9e-71 271.6 193 69.9
Zm00001eb207930 Zea mays HOM05D004903 ORTHO05D005849 6.9e-71 271.6 278 52.2
Sabra01G0130700 Salix brachista HOM05D004903 ORTHO05D005849 2.0e-70 270.0 302 52.6
Ca_23466_v3 Cicer arietinum L. HOM05D004903 ORTHO05D005849 6.5e-69 265.0 233 60.1
TPR.G15248 Trifolium pratense HOM05D004903 ORTHO05D005849 1.9e-68 263.5 233 60.1
Cfa003452 Carpinus fangiana HOM05D004903 ORTHO05D005849 2.5e-68 263.1 210 63.3
AUR62025608 Chenopodium quinoa HOM05D004903 ORTHO05D005849 2.5e-68 263.1 262 56.1
ATR0006G080 Amborella trichopoda HOM05D004903 ORTHO05D005849 4.2e-68 262.3 268 49.6
Dinv37814 Davidia involucrata HOM05D004903 ORTHO05D005849 4.2e-68 262.3 211 61.6
VMungo0331G0875 Vigna mungo HOM05D004903 ORTHO05D005849 1.6e-67 260.4 226 60.6
Oeu019513.1 Olea europaea HOM05D004903 ORTHO05D005849 2.1e-67 260.0 190 67.9
Os02g0152600 Oryza sativa ssp. japonica HOM05D004903 ORTHO05D005849 4.6e-67 258.8 281 49.8
Gorai.011G054300 Gossypium raimondii HOM05D004903 ORTHO05D005849 5.1e-66 255.4 220 60.0
MBI17_g12875_MAGBIO Magnolia biondii HOM05D004903 ORTHO05D005849 1.1e-65 254.2 277 49.5
Hma1.2p1_1999F.1_g310500 Hydrangea macrophylla HOM05D004903 ORTHO05D005849 1.9e-65 253.4 186 66.7
ECA234G0009 Erigeron canadensis HOM05D004903 ORTHO05D005849 2.8e-64 249.6 224 56.7
Actinidia31143 Actinidia chinensis HOM05D004903 ORTHO05D005849 1.3e-61 240.7 218 56.9
CDE06G0378 Ceratophyllum demersum HOM05D004903 ORTHO05D005849 3.2e-60 236.1 232 55.6
CDE04G1042 Ceratophyllum demersum HOM05D004903 ORTHO05D005849 7.9e-59 231.5 236 55.1
Hma1.2p1_0090F.1_g045680 Hydrangea macrophylla HOM05D004903 ORTHO05D005849 3.9e-58 229.2 213 55.9
Gohir.A10G050050 Gossypium hirsutum HOM05D004903 ORTHO05D005849 6.3e-56 221.9 277 48.0
Sed0021101 Sechium edule HOM05D004903 ORTHO05D005849 1.0e-53 214.5 232 52.2
Gohir.D10G050650 Gossypium hirsutum HOM05D004903 ORTHO05D005849 3.1e-47 193.0 162 59.9
Mapoly0021s0048 Marchantia polymorpha HOM05D004903 ORTHO05D005849 2.6e-46 189.9 283 39.6
AagrBONN_evm.TU.Sc2ySwM_228.2429 Anthoceros agrestis HOM05D004903 ORTHO05D005849 9.4e-44 181.4 256 37.5
THA.LOC104822767 Tarenaya hassleriana HOM05D006671 ORTHO05D008637 4.5e-38 162.5 210 45.7
Haze_16144 Corylus avellana HOM05D003205 ORTHO05D003746 1.9e-36 157.1 199 43.7
Haze_16148 Corylus avellana HOM05D003205 ORTHO05D003746 9.4e-36 154.8 195 44.6
CBR_g34164 Chara braunii HOM05D004903 ORTHO05D005849 3.0e-34 149.8 205 41.5
Gohir.D06G148232 Gossypium hirsutum HOM05D004903 ORTHO05D005849 1.5e-33 147.5 118 64.4
Pp3c13_9790 Physcomitrium patens HOM05D004903 ORTHO05D005849 9.7e-33 144.8 273 32.2
arahy.Tifrunner.gnm1.ann1.RS9BE1 Arachis hypogaea HOM05D004903 ORTHO05D005849 1.7e-32 144.1 96 74.0
arahy.Tifrunner.gnm1.ann1.AT31DH Arachis hypogaea HOM05D004903 ORTHO05D005849 2.2e-32 143.7 111 66.7
BcaB02g07096 Brassica carinata HOM05D000219 ORTHO05D000226 1.8e-31 140.6 113 63.7
BcaB07g32153 Brassica carinata HOM05D004903 ORTHO05D005849 9.1e-31 138.3 120 60.0
SEGI_28585 Sequoiadendron giganteum HOM05D004903 ORTHO05D005849 3.5e-22 109.8 120 48.3
SEGI_38260 Sequoiadendron giganteum HOM05D004903 ORTHO05D005849 3.5e-22 109.8 129 46.5
CDE06G0441 Ceratophyllum demersum HOM05D004903 ORTHO05D005849 7.7e-22 108.6 88 60.2
Gohir.D02G109866 Gossypium hirsutum HOM05D004903 ORTHO05D005849 6.8e-18 95.5 85 54.1
Cre08.g358557 Chlamydomonas reinhardtii HOM05D004903 ORTHO05D005849 7.0e-15 85.5 199 27.6
Hma1.2p1_0090F.1_g045690 Hydrangea macrophylla HOM05D004903 ORTHO05D005849 2.0e-14 84.0 69 59.4
Duzib192G1079 Durio zibethinus HOM05D004903 ORTHO05D005849 2.5e-12 77.0 206 32.0
PRCOL_00005128 Prasinoderma coloniale HOM05D004903 ORTHO05D005849 3.3e-12 76.6 206 31.6
Cpa.g.sc25.204 Carica papaya HOM05D004903 ORTHO05D005849 2.1e-11 73.9 109 40.4
Glyma.16G014900 Glycine max HOM05D004903 ORTHO05D005849 6.1e-11 72.4 99 41.4
arahy.Tifrunner.gnm1.ann1.1E2DFU Arachis hypogaea HOM05D001485 ORTHO05D005849 4.0e-10 69.7 49 73.5
TPR.G26438 Trifolium pratense HOM05D004903 ORTHO05D005849 1.2e-09 68.2 82 47.6
Actinidia21845 Actinidia chinensis HOM05D004903 ORTHO05D005849 1.4e-07 61.2 44 63.6
MBI17_g12881_MAGBIO Magnolia biondii HOM05D007686 ORTHO05D009709 9.2e-07 58.5 85 40.0
MCO07G235 Micromonas commoda HOM05D004903 ORTHO05D005849 9.2e-07 58.5 159 26.4
TPR.G14723 Trifolium pratense HOM05D004903 ORTHO05D005849 5.9e-06 55.8 35 80.0
arahy.Tifrunner.gnm1.ann1.ZRCJ38 Arachis hypogaea HOM05D004903 ORTHO05D005849 7.8e-06 55.5 65 53.8


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