Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g060920.3 Solanum lycopersicum HOM05D006148 ORTHO05D007955 1.5e-69 266.2 146 100.0
Sopen06g021070 Solanum pennellii HOM05D006148 ORTHO05D007955 7.6e-69 263.8 146 99.3
PGSC0003DMG400026577 Solanum tuberosum HOM05D006148 ORTHO05D007955 2.9e-68 261.9 146 98.6
Nitab4.5_0003456g0030 Nicotiana tabacum HOM05D006148 ORTHO05D007955 6.9e-62 240.7 146 90.4
Nitab4.5_0000506g0080 Nicotiana tabacum HOM05D006148 ORTHO05D007955 1.3e-60 236.5 146 89.0
Peaxi162Scf00190g00088 Petunia axillaris HOM05D006148 ORTHO05D007955 1.3e-57 226.5 146 84.9
PGSC0003DMG400026249 Solanum tuberosum HOM05D006148 ORTHO05D007955 3.5e-50 201.8 145 73.1
Solyc08g077970.2 Solanum lycopersicum HOM05D006148 ORTHO05D007955 3.0e-49 198.7 145 72.4
Sopen08g026480 Solanum pennellii HOM05D006148 ORTHO05D007955 1.5e-48 196.4 145 71.7
Hma1.2p1_0840F.1_g226570 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 1.6e-47 193.0 145 69.0
Dinv21692 Davidia involucrata HOM05D006148 ORTHO05D007955 3.7e-47 191.8 145 69.0
CAN.G761.17 Capsicum annuum HOM05D006148 ORTHO05D007955 4.8e-47 191.4 145 68.3
Nitab4.5_0007628g0010 Nicotiana tabacum HOM05D006148 ORTHO05D007955 1.4e-46 189.9 144 68.8
Oeu040676.1 Olea europaea HOM05D006148 ORTHO05D007955 2.6e-45 185.7 144 68.1
Cc02_g08620 Coffea canephora HOM05D006148 ORTHO05D007955 4.5e-45 184.9 142 66.9
Manes.02G044300 Manihot esculenta HOM05D006148 ORTHO05D007955 7.6e-45 184.1 145 64.8
CSS0033428 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 1.3e-44 183.3 145 66.2
TAR375G0576 Trochodendron aralioides HOM05D006148 ORTHO05D007955 1.7e-44 183.0 145 64.8
Aqoxy7G03487 Aquilegia oxysepala HOM05D006148 ORTHO05D007955 2.9e-44 182.2 144 64.6
Actinidia10861 Actinidia chinensis HOM05D006148 ORTHO05D007955 3.8e-44 181.8 145 64.8
MSTRG.9371 Avicennia marina HOM05D006148 ORTHO05D007955 8.4e-44 180.6 141 64.5
Ciclev10022620m.g Citrus clementina HOM05D006148 ORTHO05D007955 1.4e-43 179.9 142 66.2
Eucgr.D02128 Eucalyptus grandis HOM05D006148 ORTHO05D007955 2.5e-43 179.1 140 65.7
Migut.I00620 Erythranthe guttata HOM05D006148 ORTHO05D007955 3.2e-43 178.7 145 62.8
Oeu017209.1 Olea europaea HOM05D006148 ORTHO05D007955 3.2e-43 178.7 145 66.2
DCAR_005581 Daucus carota HOM05D006148 ORTHO05D007955 5.5e-43 177.9 144 63.9
RcHm_v2.0_Chr7g0205301 Rosa chinensis HOM05D006148 ORTHO05D007955 7.1e-43 177.6 141 66.0
Gohir.D12G216200 Gossypium hirsutum HOM05D006148 ORTHO05D007955 1.2e-42 176.8 145 62.1
Gorai.008G231600 Gossypium raimondii HOM05D006148 ORTHO05D007955 1.2e-42 176.8 145 62.1
Gohir.A12G213600 Gossypium hirsutum HOM05D006148 ORTHO05D007955 2.1e-42 176.0 145 62.1
Sed0014825 Sechium edule HOM05D006148 ORTHO05D007955 6.0e-42 174.5 144 61.1
SGA_v2.0_scaffold377G50308 Striga asiatica HOM05D006148 ORTHO05D007955 6.0e-42 174.5 140 66.4
SGA_v2.0_scaffold40G15681 Striga asiatica HOM05D006148 ORTHO05D007955 1.0e-41 173.7 140 65.7
ClCG09G012770 Citrullus lanatus HOM05D006148 ORTHO05D007955 1.3e-41 173.3 144 63.2
Duzib068G0643 Durio zibethinus HOM05D006148 ORTHO05D007955 1.3e-41 173.3 145 61.4
vmacro14126 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 1.8e-41 172.9 132 65.9
Atru.chr9.1220 Acer truncatum HOM05D006148 ORTHO05D007955 2.3e-41 172.6 145 63.4
MBI15_g47175_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 2.3e-41 172.6 144 63.2
TWI15G0129 Tripterygium wilfordii HOM05D006148 ORTHO05D007955 2.3e-41 172.6 145 61.4
unitig_46.g17987 Utricularia gibba HOM05D006148 ORTHO05D007955 3.0e-41 172.2 141 63.1
Prupe.5G058400 Prunus persica HOM05D006148 ORTHO05D007955 3.9e-41 171.8 142 64.8
unitig_747.g21320 Utricularia gibba HOM05D006148 ORTHO05D007955 8.7e-41 170.6 140 62.1
Rhsim07G0118900 Rhododendron simsii HOM05D006148 ORTHO05D007955 1.1e-40 170.2 127 67.7
CANSAT21G1845 Cannabis sativa HOM05D006148 ORTHO05D007955 1.9e-40 169.5 136 64.7
CSS0030063 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 2.5e-40 169.1 143 62.2
Glyma.16G092500 Glycine max HOM05D006148 ORTHO05D007955 5.7e-40 167.9 145 62.1
Potri.012G038600 Populus trichocarpa HOM05D006148 ORTHO05D007955 7.4e-40 167.5 126 69.0
Lj3A721T48 Lonicera japonica HOM05D006148 ORTHO05D007955 9.7e-40 167.2 134 65.7
FvH4_5g20230 Fragaria vesca HOM05D006148 ORTHO05D007955 1.6e-39 166.4 141 61.0
Ca_20510_v3 Cicer arietinum L. HOM05D006148 ORTHO05D007955 2.2e-39 166.0 144 59.0
Phvul.010G018500 Phaseolus vulgaris HOM05D006148 ORTHO05D007955 2.2e-39 166.0 144 61.8
TPR.G30538 Trifolium pratense HOM05D006148 ORTHO05D007955 2.2e-39 166.0 145 59.3
MD04G1051900 Malus domestica HOM05D006148 ORTHO05D007955 2.8e-39 165.6 141 63.1
Lj2A228G47 Lonicera japonica HOM05D006148 ORTHO05D007955 3.7e-39 165.2 109 78.9
MD06G1048200 Malus domestica HOM05D006148 ORTHO05D007955 3.7e-39 165.2 145 60.7
PGR031G0321 Punica granatum HOM05D006148 ORTHO05D007955 3.7e-39 165.2 143 60.8
CsaV3_3G049830 Cucumis sativus L. HOM05D006148 ORTHO05D007955 4.8e-39 164.9 140 62.1
FAN13G2154 Fragaria x ananassa HOM05D006148 ORTHO05D007955 4.8e-39 164.9 141 60.3
FAN13G3051 Fragaria x ananassa HOM05D006148 ORTHO05D007955 4.8e-39 164.9 141 60.3
Psat5g091640 Pisum sativum HOM05D006148 ORTHO05D007955 6.3e-39 164.5 148 61.5
Sed0021147 Sechium edule HOM05D006148 ORTHO05D007955 1.1e-38 163.7 144 57.6
CiPaw.12G047200 Carya illinoinensis HOM05D006148 ORTHO05D007955 1.4e-38 163.3 139 60.4
DCAR_008334 Daucus carota HOM05D006148 ORTHO05D007955 1.4e-38 163.3 138 63.0
CDE04G1348 Ceratophyllum demersum HOM05D006148 ORTHO05D007955 1.8e-38 162.9 145 59.3
Lalb_Chr18g0047251 Lupinus albus HOM05D006148 ORTHO05D007955 2.4e-38 162.5 143 61.5
Thecc.03G242700 Theobroma cacao HOM05D006148 ORTHO05D007955 3.1e-38 162.2 123 68.3
Glyma.09G078400 Glycine max HOM05D006148 ORTHO05D007955 4.1e-38 161.8 113 75.2
Lalb_Chr15g0078661 Lupinus albus HOM05D006148 ORTHO05D007955 4.1e-38 161.8 143 61.5
VMungo0331G0425 Vigna mungo HOM05D006148 ORTHO05D007955 4.1e-38 161.8 122 69.7
MELO3C003333.2 Cucumis melo HOM05D006148 ORTHO05D007955 1.2e-37 160.2 125 65.6
Rhsim07G0118700 Rhododendron simsii HOM05D006148 ORTHO05D007955 2.6e-37 159.1 146 58.9
Medtr3g086600 Medicago truncatula HOM05D006148 ORTHO05D007955 3.4e-37 158.7 144 57.6
Sabra12G0027000 Salix brachista HOM05D006148 ORTHO05D007955 4.5e-37 158.3 137 62.8
Sc22g0005540 Simmondsia chinensis HOM05D006148 ORTHO05D007955 5.9e-37 157.9 144 58.3
Lj3g0001636 Lotus japonicus HOM05D006148 ORTHO05D007955 7.7e-37 157.5 136 61.8
COL.COLO4_07508 Corchorus olitorius HOM05D006148 ORTHO05D007955 1.0e-36 157.1 145 57.2
Lsat_1_v5_gn_3_16181 Lactuca sativa HOM05D006148 ORTHO05D007955 1.7e-36 156.4 145 57.2
ECA248G1075 Erigeron canadensis HOM05D006148 ORTHO05D007955 6.5e-36 154.5 144 56.2
SalBow1G4160 Salvia bowleyana HOM05D006148 ORTHO05D007955 8.5e-36 154.1 123 67.5
FAN04G0567 Fragaria x ananassa HOM05D006148 ORTHO05D007955 1.1e-35 153.7 163 52.8
HanXRQChr17g0550021 Helianthus annuus HOM05D006148 ORTHO05D007955 1.1e-35 153.7 125 64.0
THA.LOC104812735 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 1.1e-35 153.7 148 56.1
Carub.0007s2441 Capsella rubella HOM05D006148 ORTHO05D007955 5.5e-35 151.4 152 53.9
Aa31LG2G13090 Aethionema arabicum HOM05D006148 ORTHO05D007955 9.4e-35 150.6 141 57.4
FAN08G3523 Fragaria x ananassa HOM05D006148 ORTHO05D007955 1.2e-34 150.2 172 50.0
BcaC09g50434 Brassica carinata HOM05D006148 ORTHO05D007955 2.7e-34 149.1 148 56.1
A01p20300 Brassica napus HOM05D006148 ORTHO05D007955 2.7e-34 149.1 148 56.1
C01p25460 Brassica napus HOM05D006148 ORTHO05D007955 2.7e-34 149.1 148 55.4
BraA01t01958Z Brassica rapa HOM05D006148 ORTHO05D007955 2.7e-34 149.1 148 56.1
PSO541G2943 Papaver somniferum HOM05D006148 ORTHO05D007955 3.6e-34 148.7 120 60.8
BolC1t02497H Brassica oleracea HOM05D006148 ORTHO05D007955 4.6e-34 148.3 148 56.1
Hund11457 Selenicereus undatus HOM05D006148 ORTHO05D007955 7.9e-34 147.5 139 57.6
THA.LOC104807925 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 7.9e-34 147.5 126 61.1
THA.LOC104814463 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 1.0e-33 147.1 126 59.5
BcaNung00135 Brassica carinata HOM05D006148 ORTHO05D007955 1.4e-33 146.7 130 58.5
EL10Ac5g12797 Beta vulgaris HOM05D006148 ORTHO05D007955 2.3e-33 146.0 131 57.3
arahy.Tifrunner.gnm1.ann1.0GR2GF Arachis hypogaea HOM05D006148 ORTHO05D007955 3.0e-33 145.6 143 50.3
arahy.Tifrunner.gnm1.ann1.L2DS42 Arachis hypogaea HOM05D006148 ORTHO05D007955 3.0e-33 145.6 143 50.3
Haze_05448 Corylus avellana HOM05D006148 ORTHO05D007955 6.7e-33 144.4 207 43.0
HPP92_005702 Vanilla planifolia HOM05D006148 ORTHO05D007955 1.5e-32 143.3 124 58.9
Sp7g17180 Schrenkiella parvula HOM05D006148 ORTHO05D007955 4.3e-32 141.7 149 53.0
AUR62017180 Chenopodium quinoa HOM05D006148 ORTHO05D007955 2.2e-31 139.4 125 58.4
Os04g0431800 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 3.7e-31 138.7 133 55.6
AT4G17010 Arabidopsis thaliana HOM05D006148 ORTHO05D007955 4.8e-31 138.3 130 58.5
PSO675G9254 Papaver somniferum HOM05D006148 ORTHO05D007955 4.8e-31 138.3 120 59.2
CARHR223570 Cardamine hirsuta HOM05D006148 ORTHO05D007955 1.8e-30 136.3 150 50.7
Os02g0494600 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 2.4e-30 136.0 133 54.9
ATR0767G234 Amborella trichopoda HOM05D006148 ORTHO05D007955 2.6e-29 132.5 120 55.8
AL7G37710 Arabidopsis lyrata HOM05D006148 ORTHO05D007955 3.8e-28 128.6 130 54.6
Nn1g00796 Nelumbo nucifera HOM05D006148 ORTHO05D007955 3.8e-28 128.6 126 55.6
Hma1.2p1_1008F.1_g247180 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 5.0e-28 128.3 113 60.2
Thhalv10026445m.g Eutrema salsugineum HOM05D006148 ORTHO05D007955 4.2e-27 125.2 130 52.3
Zm00001eb422600 Zea mays HOM05D006148 ORTHO05D007955 1.6e-26 123.2 107 59.8
vmacro00048 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 4.7e-26 121.7 145 51.7
MBI06_g25325_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 6.7e-25 117.9 109 55.0
QL12p009037 Quercus lobata HOM05D006148 ORTHO05D007955 2.0e-24 116.3 303 31.4
Lj2A721G5 Lonicera japonica HOM05D006148 ORTHO05D007955 9.4e-19 97.4 70 72.9
SEGI_12345 Sequoiadendron giganteum HOM05D006148 ORTHO05D007955 1.1e-16 90.5 126 42.9
Nitab4.5_0000500g0150 Nicotiana tabacum HOM05D006148 ORTHO05D007955 3.3e-16 89.0 140 42.9
Cpa.g.sc1152.2 Carica papaya HOM05D006148 ORTHO05D007955 9.7e-16 87.4 76 57.9
Ah.07g196390 Amaranthus hybridus HOM05D006148 ORTHO05D007955 1.7e-15 86.7 94 48.9
AUR62010708 Chenopodium quinoa HOM05D006148 ORTHO05D007955 2.0e-13 79.7 137 38.7
AUR62027260 Chenopodium quinoa HOM05D006148 ORTHO05D007955 4.5e-13 78.6 125 39.2
Oeu017208.1 Olea europaea HOM05D002196 ORTHO05D002565 1.4e-09 67.0 69 49.3
MBI15_g37973_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 4.1e-06 55.5 68 44.1


User provided reference genes

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