Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g060890.4 Solanum lycopersicum HOM05D006859 ORTHO05D007990 2.5e-123 445.7 256 100.0
PGSC0003DMG400024153 Solanum tuberosum HOM05D006859 ORTHO05D007990 3.2e-115 418.7 275 89.5
Sopen06g021040 Solanum pennellii HOM05D006859 ORTHO05D007990 4.1e-110 401.7 250 94.0
Nitab4.5_0003456g0040 Nicotiana tabacum HOM05D006859 ORTHO05D007990 8.0e-82 307.8 274 70.4
CAN.G62.4 Capsicum annuum HOM05D006859 ORTHO05D007990 3.4e-80 302.4 203 80.8
Nitab4.5_0000506g0100 Nicotiana tabacum HOM05D006859 ORTHO05D007990 2.2e-79 299.7 243 75.3
Peaxi162Scf00190g00099 Petunia axillaris HOM05D006859 ORTHO05D007990 2.3e-68 263.1 214 69.6
Dinv28858 Davidia involucrata HOM05D006859 ORTHO05D007990 3.2e-62 242.7 255 59.2
QL12p009356 Quercus lobata HOM05D006859 ORTHO05D007990 3.0e-60 236.1 255 56.9
CiPaw.11G069300 Carya illinoinensis HOM05D006859 ORTHO05D007990 6.6e-60 235.0 255 56.1
Potri.003G082200 Populus trichocarpa HOM05D006859 ORTHO05D007990 1.5e-59 233.8 255 55.7
CSS0046225 Camellia sinensis var. sinensis HOM05D006859 ORTHO05D007990 1.2e-58 230.7 254 57.5
Prupe.5G059200 Prunus persica HOM05D006859 ORTHO05D007990 1.2e-58 230.7 255 55.7
Sabra03G0053000 Salix brachista HOM05D006859 ORTHO05D007990 2.1e-58 229.9 255 56.1
Oeu017213.1 Olea europaea HOM05D006859 ORTHO05D007990 3.6e-58 229.2 258 57.0
vmacro00041 Vaccinium macrocarpon HOM05D006859 ORTHO05D007990 8.1e-58 228.0 254 57.5
Actinidia25901 Actinidia chinensis HOM05D006859 ORTHO05D007990 2.4e-57 226.5 253 57.3
MD00G1165000 Malus domestica HOM05D006859 ORTHO05D007990 1.2e-56 224.2 255 55.7
Eucgr.D02124 Eucalyptus grandis HOM05D006859 ORTHO05D007990 1.9e-54 216.9 255 53.3
Atru.chr9.1231 Acer truncatum HOM05D006859 ORTHO05D007990 2.4e-54 216.5 254 54.3
PGR031G1874 Punica granatum HOM05D006859 ORTHO05D007990 4.2e-54 215.7 255 55.7
FvH4_5g20140 Fragaria vesca HOM05D006859 ORTHO05D007990 9.2e-54 214.5 257 52.5
Lj2C227G12 Lonicera japonica HOM05D006859 ORTHO05D007990 9.2e-54 214.5 256 55.5
Gohir.D08G184600 Gossypium hirsutum HOM05D006859 ORTHO05D007990 2.7e-53 213.0 256 52.7
Manes.01G086700 Manihot esculenta HOM05D006859 ORTHO05D007990 4.6e-53 212.2 256 53.1
Hund11327 Selenicereus undatus HOM05D006859 ORTHO05D007990 4.6e-53 212.2 254 51.2
RcHm_v2.0_Chr7g0205091 Rosa chinensis HOM05D006859 ORTHO05D007990 3.0e-52 209.5 257 52.5
Gorai.004G193900 Gossypium raimondii HOM05D006859 ORTHO05D007990 3.9e-52 209.1 256 52.0
Duzib068G0861 Durio zibethinus HOM05D006859 ORTHO05D007990 1.5e-51 207.2 256 50.8
FAN18G2706 Fragaria x ananassa HOM05D006859 ORTHO05D007990 1.5e-51 207.2 258 52.3
TAR636G0545 Trochodendron aralioides HOM05D006859 ORTHO05D007990 1.5e-51 207.2 259 54.1
Cc08_g11510 Coffea canephora HOM05D006859 ORTHO05D007990 3.3e-51 206.1 256 52.7
Duzib205G1414 Durio zibethinus HOM05D006859 ORTHO05D007990 1.2e-50 204.1 256 50.0
MD04G1050900 Malus domestica HOM05D006859 ORTHO05D007990 1.2e-50 204.1 253 53.0
PSO717G0098 Papaver somniferum HOM05D006859 ORTHO05D007990 1.2e-50 204.1 258 51.9
FAN08G0582 Fragaria x ananassa HOM05D006859 ORTHO05D007990 1.6e-50 203.8 256 52.0
PSO675G5712 Papaver somniferum HOM05D006859 ORTHO05D007990 6.2e-50 201.8 257 51.4
RhsimUnG0092900 Rhododendron simsii HOM05D006859 ORTHO05D007990 6.2e-50 201.8 257 54.1
Gohir.A08G165800 Gossypium hirsutum HOM05D006859 ORTHO05D007990 1.1e-49 201.1 259 49.8
Migut.A01048 Erythranthe guttata HOM05D006859 ORTHO05D007990 4.0e-49 199.1 257 51.8
TWI15G0070 Tripterygium wilfordii HOM05D006859 ORTHO05D007990 9.0e-49 198.0 254 50.0
Medtr5g013280 Medicago truncatula HOM05D006859 ORTHO05D007990 2.6e-48 196.4 268 50.0
FAN04G1798 Fragaria x ananassa HOM05D006859 ORTHO05D007990 5.8e-48 195.3 257 51.8
CANSAT21G2559 Cannabis sativa HOM05D006859 ORTHO05D007990 7.6e-48 194.9 254 48.4
Aqoxy7G00861 Aquilegia oxysepala HOM05D006859 ORTHO05D007990 1.3e-47 194.1 256 48.8
EL10Ac5g12291 Beta vulgaris HOM05D006859 ORTHO05D007990 2.9e-47 193.0 254 51.2
TPR.G31422 Trifolium pratense HOM05D006859 ORTHO05D007990 1.4e-46 190.7 257 50.6
Ciclev10021440m.g Citrus clementina HOM05D006859 ORTHO05D007990 9.3e-46 188.0 254 48.4
Lj2g0014108 Lotus japonicus HOM05D006859 ORTHO05D007990 1.2e-45 187.6 276 46.7
Cpa.g.sc89.10 Carica papaya HOM05D006859 ORTHO05D007990 1.6e-45 187.2 256 49.6
DCAR_004596 Daucus carota HOM05D006859 ORTHO05D007990 1.3e-44 184.1 263 50.6
Phvul.002G001000 Phaseolus vulgaris HOM05D006859 ORTHO05D007990 1.7e-44 183.7 257 49.4
MBI04_g28364_MAGBIO Magnolia biondii HOM05D006859 ORTHO05D007990 3.9e-44 182.6 258 49.6
Gohir.D03G167400 Gossypium hirsutum HOM05D006859 ORTHO05D007990 1.9e-43 180.3 255 45.1
Nn1g00823 Nelumbo nucifera HOM05D006859 ORTHO05D007990 2.5e-43 179.9 258 48.8
VMungo1215G2710 Vigna mungo HOM05D006859 ORTHO05D007990 4.3e-43 179.1 262 49.6
AUR62018861 Chenopodium quinoa HOM05D006859 ORTHO05D007990 5.6e-43 178.7 232 50.0
Hma1.2p1_0840F.1_g226470 Hydrangea macrophylla HOM05D006859 ORTHO05D007990 1.6e-42 177.2 271 44.3
HanXRQChr06g0164541 Helianthus annuus HOM05D006859 ORTHO05D007990 8.1e-42 174.9 257 48.2
Gorai.003G177100 Gossypium raimondii HOM05D006859 ORTHO05D007990 1.1e-41 174.5 255 41.6
Lalb_Chr16g0379391 Lupinus albus HOM05D006859 ORTHO05D007990 3.1e-41 172.9 254 48.0
CsaV3_3G049860 Cucumis sativus L. HOM05D006859 ORTHO05D007990 1.2e-40 171.0 253 45.1
MELO3C003330.2 Cucumis melo HOM05D006859 ORTHO05D007990 2.6e-40 169.9 255 43.9
Psat2g176200 Pisum sativum HOM05D006859 ORTHO05D007990 4.5e-40 169.1 253 48.2
Glyma.01G205600 Glycine max HOM05D006859 ORTHO05D007990 2.9e-39 166.4 257 48.6
Gohir.A03G005200 Gossypium hirsutum HOM05D006859 ORTHO05D007990 2.9e-39 166.4 255 43.9
ECA236G3610 Erigeron canadensis HOM05D006859 ORTHO05D007990 4.9e-39 165.6 237 48.5
Actinidia02186 Actinidia chinensis HOM05D006859 ORTHO05D007990 3.2e-38 162.9 254 47.2
Lsat_1_v5_gn_1_53480 Lactuca sativa HOM05D006859 ORTHO05D007990 4.6e-37 159.1 260 46.2
arahy.Tifrunner.gnm1.ann1.B2NILF Arachis hypogaea HOM05D006859 ORTHO05D007990 7.4e-35 151.8 259 46.3
arahy.Tifrunner.gnm1.ann1.WYE05V Arachis hypogaea HOM05D006859 ORTHO05D007990 7.4e-35 151.8 259 46.3
Oeu040677.2 Olea europaea HOM05D006859 ORTHO05D007990 3.7e-34 149.4 192 47.9
Glyma.11G037300 Glycine max HOM05D006859 ORTHO05D007990 3.4e-32 142.9 240 41.2
ATR0665G206 Amborella trichopoda HOM05D006859 ORTHO05D007990 5.8e-32 142.1 257 42.4
Cfa012667 Carpinus fangiana HOM05D006859 ORTHO05D007990 9.9e-32 141.4 223 48.9
HPP92_014892 Vanilla planifolia HOM05D006859 ORTHO05D007990 1.1e-30 137.9 257 37.7
Zm00001eb391020 Zea mays HOM05D006859 ORTHO05D007990 4.2e-30 136.0 255 42.0
Os10g0563400 Oryza sativa ssp. japonica HOM05D006859 ORTHO05D007990 1.2e-29 134.4 255 42.0
Thecc.03G243500 Theobroma cacao HOM05D006859 ORTHO05D007990 6.0e-29 132.1 184 51.1
Sp7g16620 Schrenkiella parvula HOM05D006859 ORTHO05D007990 1.0e-28 131.3 257 40.1
CARHR224240 Cardamine hirsuta HOM05D006859 ORTHO05D007990 3.9e-28 129.4 262 38.2
BcaNung00082 Brassica carinata HOM05D006859 ORTHO05D007990 6.7e-28 128.6 257 38.1
AUR62007150 Chenopodium quinoa HOM05D006859 ORTHO05D007990 8.7e-28 128.3 221 43.0
Sc01g0008110 Simmondsia chinensis HOM05D006859 ORTHO05D007990 1.5e-27 127.5 179 49.7
Thhalv10025654m.g Eutrema salsugineum HOM05D006859 ORTHO05D007990 1.9e-27 127.1 265 39.6
Carub.0007s2385 Capsella rubella HOM05D006859 ORTHO05D007990 7.4e-27 125.2 258 37.6
AT4G17540 Arabidopsis thaliana HOM05D006859 ORTHO05D007990 2.1e-26 123.6 258 38.4
AL7G37080 Arabidopsis lyrata HOM05D006859 ORTHO05D007990 1.4e-25 120.9 263 39.2
A01p09620 Brassica napus HOM05D006859 ORTHO05D007990 1.4e-25 120.9 258 36.8
THA.LOC104798356 Tarenaya hassleriana HOM05D006859 ORTHO05D007990 2.4e-25 120.2 261 39.8
BraA01t00904Z Brassica rapa HOM05D006859 ORTHO05D007990 4.0e-25 119.4 258 36.4
Sed0000052 Sechium edule HOM05D006859 ORTHO05D007990 4.0e-25 119.4 201 39.3
BcaC09g51632 Brassica carinata HOM05D006859 ORTHO05D007990 1.5e-24 117.5 256 36.3
BolC1t01085H Brassica oleracea HOM05D006859 ORTHO05D007990 4.5e-24 115.9 256 35.5
Ca_24604_v3 Cicer arietinum L. HOM05D006859 ORTHO05D007990 4.5e-24 115.9 262 35.5
C01p11190 Brassica napus HOM05D006859 ORTHO05D007990 2.9e-23 113.2 256 35.2
CDE11G0841 Ceratophyllum demersum HOM05D006859 ORTHO05D007990 6.5e-23 112.1 189 48.7
Aa31LG6G280 Aethionema arabicum HOM05D006859 ORTHO05D007990 8.4e-23 111.7 258 38.0
unitig_8.g3018 Utricularia gibba HOM05D000481 ORTHO05D007990 8.4e-23 111.7 232 40.5
SalBow6G1554 Salvia bowleyana HOM05D006859 ORTHO05D007990 2.5e-22 110.2 200 46.0
ClCG09G012800 Citrullus lanatus HOM05D006859 ORTHO05D007990 1.3e-20 104.4 230 34.3
DCAR_008336 Daucus carota HOM05D002294 ORTHO05D002367 8.2e-18 95.1 260 31.9
GSVIVG01007348001 Vitis vinifera HOM05D006859 ORTHO05D007990 1.2e-13 81.3 130 40.8
SGA_v2.0_scaffold199G41240 Striga asiatica HOM05D006859 ORTHO05D007990 2.1e-13 80.5 209 32.5
VMungo1215G2895 Vigna mungo HOM05D006859 ORTHO05D007990 5.7e-11 72.4 253 31.2
Glyma.11G037400 Glycine max HOM05D006859 ORTHO05D007990 1.3e-10 71.2 272 29.8
Phvul.002G001100 Phaseolus vulgaris HOM05D006859 ORTHO05D007990 8.2e-10 68.6 252 34.1
GSVIVG01007347001 Vitis vinifera HOM05D006859 ORTHO05D007990 6.9e-09 65.5 39 76.9
COL.COLO4_21682 Corchorus olitorius HOM05D006859 ORTHO05D007990 7.7e-08 62.0 154 35.1
CDE11G0285 Ceratophyllum demersum HOM05D006859 ORTHO05D007990 1.1e-06 58.2 89 53.9
PSO717G0090 Papaver somniferum HOM05D006859 ORTHO05D007990 1.9e-06 57.4 221 29.0
HPP92_014890 Vanilla planifolia HOM05D006859 ORTHO05D007990 1.9e-06 57.4 70 40.0


User provided reference genes

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