Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g060675.1 Solanum lycopersicum HOM05D008099 ORTHO05D010084 6.3e-55 217.2 113 100.0
Sopen06g020800 Solanum pennellii HOM05D008099 ORTHO05D010084 6.3e-55 217.2 113 100.0
PGSC0003DMG400035312 Solanum tuberosum HOM05D008099 ORTHO05D010084 2.9e-52 208.4 113 94.7
PGSC0003DMG400013812 Solanum tuberosum HOM05D008099 ORTHO05D010084 1.0e-44 183.3 117 82.9
Solyc08g007375.1 Solanum lycopersicum HOM05D008099 ORTHO05D010084 3.6e-26 121.7 125 57.6
Sopen08g003320 Solanum pennellii HOM05D008099 ORTHO05D010084 3.6e-26 121.7 125 57.6
PGSC0003DMG400012531 Solanum tuberosum HOM05D008099 ORTHO05D010084 1.0e-25 120.2 125 56.8
Cc08_g12470 Coffea canephora HOM05D008099 ORTHO05D010084 1.7e-20 102.8 120 47.5
Oeu019597.1 Olea europaea HOM05D008099 ORTHO05D010084 1.6e-18 96.3 114 50.9
Actinidia05205 Actinidia chinensis HOM05D008099 ORTHO05D010084 1.5e-16 89.7 118 48.3
Hma1.2p1_0316F.1_g123190 Hydrangea macrophylla HOM05D008099 ORTHO05D010084 1.3e-15 86.7 118 44.9
Hma1.2p1_0316F.1_g123200 Hydrangea macrophylla HOM05D008099 ORTHO05D010084 1.1e-14 83.6 118 43.2
Thecc.03G251800 Theobroma cacao HOM05D008099 ORTHO05D010084 1.1e-14 83.6 116 42.2
Gohir.D12G219832 Gossypium hirsutum HOM05D008099 ORTHO05D010084 5.4e-14 81.3 116 40.5
CiPaw.12G109700 Carya illinoinensis HOM05D008099 ORTHO05D010084 1.6e-13 79.7 115 42.6
Gohir.A12G217300 Gossypium hirsutum HOM05D008099 ORTHO05D010084 2.0e-13 79.3 116 39.7
Gorai.008G235500 Gossypium raimondii HOM05D008099 ORTHO05D010084 2.0e-13 79.3 116 40.5
Potri.003G076700 Populus trichocarpa HOM05D008099 ORTHO05D010084 2.0e-13 79.3 118 41.5
Cpa.g.sc29.154 Carica papaya HOM05D008099 ORTHO05D010084 2.7e-13 79.0 115 36.5
Gorai.004G198900 Gossypium raimondii HOM05D008099 ORTHO05D010084 3.5e-13 78.6 119 36.1
Cc08_g12450 Coffea canephora HOM05D008099 ORTHO05D010084 4.6e-13 78.2 92 45.7
Rhsim07G0108300 Rhododendron simsii HOM05D008099 ORTHO05D010084 6.0e-13 77.8 123 42.3
Prupe.5G069300 Prunus persica HOM05D008099 ORTHO05D010084 1.3e-12 76.6 126 40.5
Potri.001G158100 Populus trichocarpa HOM05D008099 ORTHO05D010084 3.9e-12 75.1 118 39.8
TWI60G1554 Tripterygium wilfordii HOM05D008099 ORTHO05D010084 1.1e-11 73.6 118 43.2
TAR627G0883 Trochodendron aralioides HOM05D008099 ORTHO05D010084 3.3e-11 72.0 115 41.7
TAR624G1172 Trochodendron aralioides HOM05D008099 ORTHO05D010084 7.3e-11 70.9 115 42.6
COL.COLO4_37181 Corchorus olitorius HOM05D008099 ORTHO05D010084 2.8e-10 68.9 124 35.5
SalBow6G1675 Salvia bowleyana HOM05D008099 ORTHO05D010084 3.6e-10 68.6 110 44.5
Sabra01G0133400 Salix brachista HOM05D008099 ORTHO05D010084 6.2e-10 67.8 119 41.2
Ciclev10022924m.g Citrus clementina HOM05D008099 ORTHO05D010084 1.1e-09 67.0 122 37.7
Atru.chr9.1318 Acer truncatum HOM05D008099 ORTHO05D010084 1.8e-09 66.2 107 38.3
MD04G1064000 Malus domestica HOM05D008099 ORTHO05D010084 8.9e-09 63.9 123 36.6
TAR374G1517 Trochodendron aralioides HOM05D008099 ORTHO05D010084 2.6e-08 62.4 116 36.2
Migut.N00880 Erythranthe guttata HOM05D008099 ORTHO05D010084 7.5e-08 60.8 91 39.6
Nn6g33964 Nelumbo nucifera HOM05D008099 ORTHO05D010084 2.9e-07 58.9 114 36.0
Manes.01G080400 Manihot esculenta HOM05D008099 ORTHO05D010084 3.7e-07 58.5 120 36.7
Cfa012714 Carpinus fangiana HOM05D008099 ORTHO05D010084 8.3e-07 57.4 117 38.5
RcHm_v2.0_Chr7g0203191 Rosa chinensis HOM05D008099 ORTHO05D010084 8.3e-07 57.4 135 34.1
ECA233G2908 Erigeron canadensis HOM05D008099 ORTHO05D010084 1.9e-06 56.2 115 33.0
FAN04G2136 Fragaria x ananassa HOM05D008099 ORTHO05D010084 1.9e-06 56.2 139 32.4
SGA_v2.0_scaffold52G19121 Striga asiatica HOM05D002583 ORTHO05D002776 3.2e-06 55.5 110 40.9
FAN08G3271 Fragaria x ananassa HOM05D008099 ORTHO05D010084 5.4e-06 54.7 138 32.6
FAN18G4449 Fragaria x ananassa HOM05D008099 ORTHO05D010084 9.2e-06 53.9 139 33.1


User provided reference genes

Program Settings