Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g054140.4 Solanum lycopersicum HOM05D007633 ORTHO05D008817 5.9e-109 397.5 196 100.0
Sopen06g019290 Solanum pennellii HOM05D007633 ORTHO05D008817 4.4e-88 328.2 174 94.8
Nitab4.5_0008118g0020 Nicotiana tabacum HOM05D007633 ORTHO05D008817 5.0e-68 261.5 183 71.6
Nitab4.5_0000321g0150 Nicotiana tabacum HOM05D007633 ORTHO05D008817 8.6e-60 234.2 183 67.2
Sopen09g031040 Solanum pennellii HOM05D007633 ORTHO05D008817 2.8e-58 229.2 184 65.2
Solyc09g082160.4 Solanum lycopersicum HOM05D007633 ORTHO05D008817 3.6e-58 228.8 184 65.2
PGSC0003DMG400032254 Solanum tuberosum HOM05D007633 ORTHO05D008817 1.1e-57 227.3 184 64.7
Nitab4.5_0001342g0010 Nicotiana tabacum HOM05D007633 ORTHO05D008817 1.5e-56 223.4 184 63.6
Peaxi162Scf00192g01119 Petunia axillaris HOM05D007633 ORTHO05D008817 1.0e-52 210.7 168 67.3
Peaxi162Scf00092g00615 Petunia axillaris HOM05D007633 ORTHO05D008817 7.8e-45 184.5 201 53.7
PGSC0003DMG400016306 Solanum tuberosum HOM05D007633 ORTHO05D008817 2.3e-44 183.0 96 95.8
Oeu011618.1 Olea europaea HOM05D007633 ORTHO05D008817 3.8e-39 165.6 180 50.0
CSS0018565 Camellia sinensis var. sinensis HOM05D007633 ORTHO05D008817 3.9e-36 155.6 168 48.2
Hma1.2p1_0745F.1_g212150 Hydrangea macrophylla HOM05D007633 ORTHO05D008817 1.3e-34 150.6 178 46.1
Cc03_g03920 Coffea canephora HOM05D007633 ORTHO05D008817 1.6e-34 150.2 176 48.9
Nitab4.5_0001920g0040 Nicotiana tabacum HOM05D007633 ORTHO05D008817 1.4e-33 147.1 134 57.5
Actinidia36954 Actinidia chinensis HOM05D007633 ORTHO05D008817 5.3e-33 145.2 185 42.7
MSTRG.21860 Avicennia marina HOM05D007633 ORTHO05D008817 5.3e-33 145.2 176 43.8
Rhsim02G0025900 Rhododendron simsii HOM05D007633 ORTHO05D008817 7.6e-32 141.4 189 40.2
Dinv14003 Davidia involucrata HOM05D007633 ORTHO05D008817 9.9e-32 141.0 166 44.0
Medtr5g006410 Medicago truncatula HOM05D007633 ORTHO05D008817 1.4e-30 137.1 172 40.1
FvH4_4g16290 Fragaria vesca HOM05D007633 ORTHO05D008817 1.6e-29 133.7 163 38.0
FAN12G0707 Fragaria x ananassa HOM05D007633 ORTHO05D008817 1.6e-29 133.7 163 38.0
Eucgr.H03451 Eucalyptus grandis HOM05D007633 ORTHO05D008817 2.1e-29 133.3 158 41.1
FAN02G3335 Fragaria x ananassa HOM05D007633 ORTHO05D008817 2.1e-29 133.3 169 37.9
FAN22G0362 Fragaria x ananassa HOM05D007633 ORTHO05D008817 2.1e-29 133.3 169 37.9
Prupe.1G015500 Prunus persica HOM05D007633 ORTHO05D008817 7.9e-29 131.3 163 40.5
Cfa015662 Carpinus fangiana HOM05D007633 ORTHO05D008817 1.0e-28 131.0 169 40.8
Potri.008G154200 Populus trichocarpa HOM05D007633 ORTHO05D008817 1.0e-28 131.0 184 40.2
RcHm_v2.0_Chr4g0415951 Rosa chinensis HOM05D007633 ORTHO05D008817 3.9e-28 129.0 158 37.3
QL06p002095 Quercus lobata HOM05D007633 ORTHO05D008817 6.7e-28 128.3 157 43.3
Ciclev10005651m.g Citrus clementina HOM05D007633 ORTHO05D008817 8.7e-28 127.9 158 39.9
Haze_00885 Corylus avellana HOM05D007633 ORTHO05D008817 8.7e-28 127.9 169 40.2
Glyma.11G006100 Glycine max HOM05D007633 ORTHO05D008817 8.7e-28 127.9 158 39.9
LjContig00408g0001251 Lotus japonicus HOM05D007633 ORTHO05D008817 1.9e-27 126.7 164 37.8
TAR636G0739 Trochodendron aralioides HOM05D007633 ORTHO05D008817 2.5e-27 126.3 157 42.7
Atru.chr4.2449 Acer truncatum HOM05D007633 ORTHO05D008817 3.3e-27 125.9 158 40.5
Migut.N00191 Erythranthe guttata HOM05D007633 ORTHO05D008817 3.3e-27 125.9 172 39.0
Gohir.A09G053600 Gossypium hirsutum HOM05D007633 ORTHO05D008817 3.7e-26 122.5 160 40.0
MELO3C006526.2 Cucumis melo HOM05D007633 ORTHO05D008817 4.8e-26 122.1 157 41.4
Psat4g209480 Pisum sativum HOM05D007633 ORTHO05D008817 1.1e-25 120.9 163 38.0
CsaV3_3G013230 Cucumis sativus L. HOM05D007633 ORTHO05D008817 1.8e-25 120.2 157 40.1
Aqoxy2G03409 Aquilegia oxysepala HOM05D007633 ORTHO05D008817 3.1e-25 119.4 159 41.5
Ca_24403_v3 Cicer arietinum L. HOM05D007633 ORTHO05D008817 3.1e-25 119.4 174 36.2
PGR004G0463 Punica granatum HOM05D007633 ORTHO05D008817 4.0e-25 119.0 157 39.5
Potri.010G086300 Populus trichocarpa HOM05D007633 ORTHO05D008817 6.9e-25 118.2 184 34.8
HanXRQChr02g0035611 Helianthus annuus HOM05D007633 ORTHO05D008817 1.2e-24 117.5 150 42.0
MD16G1195500 Malus domestica HOM05D007633 ORTHO05D008817 1.2e-24 117.5 161 39.8
TPR.G38043 Trifolium pratense HOM05D007633 ORTHO05D008817 1.2e-24 117.5 163 35.6
GSVIVG01017995001 Vitis vinifera HOM05D007633 ORTHO05D008817 1.5e-24 117.1 157 38.9
Nn1g02349 Nelumbo nucifera HOM05D007633 ORTHO05D008817 2.0e-24 116.7 159 42.1
SalBow3G0862 Salvia bowleyana HOM05D007633 ORTHO05D008817 2.0e-24 116.7 174 38.5
Sed0010969 Sechium edule HOM05D007633 ORTHO05D008817 2.0e-24 116.7 158 38.6
vmacro15349 Vaccinium macrocarpon HOM05D007633 ORTHO05D008817 2.6e-24 116.3 183 36.1
Glyma.01G237200 Glycine max HOM05D007633 ORTHO05D008817 3.4e-24 115.9 183 35.0
Gorai.006G055000 Gossypium raimondii HOM05D007633 ORTHO05D008817 4.5e-24 115.5 194 35.6
Duzib212G0599 Durio zibethinus HOM05D007633 ORTHO05D008817 1.0e-23 114.4 181 35.9
Sabra10G0057400 Salix brachista HOM05D007633 ORTHO05D008817 1.0e-23 114.4 183 32.8
Gohir.D09G053050 Gossypium hirsutum HOM05D007633 ORTHO05D008817 1.3e-23 114.0 188 35.6
ECA240G3784 Erigeron canadensis HOM05D000137 ORTHO05D000452 1.7e-23 113.6 173 38.2
Sc19g0004060 Simmondsia chinensis HOM05D005574 ORTHO05D007102 2.2e-23 113.2 200 32.5
Lalb_Chr01g0013131 Lupinus albus HOM05D007633 ORTHO05D008817 4.9e-23 112.1 175 36.0
Thecc.04G233700 Theobroma cacao HOM05D007633 ORTHO05D008817 2.7e-21 106.3 189 34.4
CANSAT78G1135 Cannabis sativa HOM05D007633 ORTHO05D008817 7.9e-21 104.8 180 32.2
Manes.03G177200 Manihot esculenta HOM05D007633 ORTHO05D008817 1.9e-19 100.1 185 30.8
Phvul.002G044600 Phaseolus vulgaris HOM05D007633 ORTHO05D008817 1.9e-19 100.1 180 35.0
Hund12119 Selenicereus undatus HOM05D007633 ORTHO05D008817 9.7e-19 97.8 149 33.6
Lsat_1_v5_gn_7_64401 Lactuca sativa HOM05D007633 ORTHO05D008817 1.3e-18 97.4 149 38.9
CDE07G1037 Ceratophyllum demersum HOM05D007633 ORTHO05D008817 3.7e-18 95.9 149 39.6
TWI73G0352 Tripterygium wilfordii HOM05D007633 ORTHO05D008817 8.2e-18 94.7 183 30.1
PSO210G6592 Papaver somniferum HOM05D007633 ORTHO05D008817 1.8e-17 93.6 161 34.2
VMungo1215G1793 Vigna mungo HOM05D007633 ORTHO05D008817 1.8e-17 93.6 183 33.9
Ah.04g154590 Amaranthus hybridus HOM05D007633 ORTHO05D008817 4.1e-17 92.4 151 35.1
CiPaw.01G167500 Carya illinoinensis HOM05D007633 ORTHO05D008817 4.1e-17 92.4 167 32.9
PSO761G0485 Papaver somniferum HOM05D007633 ORTHO05D008817 5.3e-17 92.0 161 34.2
AUR62034710 Chenopodium quinoa HOM05D007633 ORTHO05D008817 2.2e-15 86.7 143 33.6
VMungo1215G1192 Vigna mungo HOM05D007633 ORTHO05D008817 6.5e-15 85.1 186 34.9
FAN07G1430 Fragaria x ananassa HOM05D007633 ORTHO05D008817 8.5e-15 84.7 103 39.8
Lsat_1_v5_gn_8_155361 Lactuca sativa HOM05D007633 ORTHO05D008817 6.7e-12 75.1 109 37.6
ClCG05G005110 Citrullus lanatus HOM05D007633 ORTHO05D008817 2.8e-10 69.7 160 29.4
EL10Ac3g06495 Beta vulgaris HOM05D007633 ORTHO05D008817 1.3e-07 60.8 144 33.3
AT1G05430 Arabidopsis thaliana HOM05D012198 ORTHO05D008817 1.7e-07 60.5 165 32.1
Carub.0001s0476 Capsella rubella HOM05D012198 ORTHO05D008817 6.5e-07 58.5 192 29.7
Lalb_Chr01g0013111 Lupinus albus HOM05D007633 ORTHO05D008817 6.5e-07 58.5 65 49.2
AL1G15270 Arabidopsis lyrata HOM05D012198 ORTHO05D008817 1.4e-06 57.4 179 31.3


User provided reference genes

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