Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g050837.1 Solanum lycopersicum HOM05D002744 ORTHO05D008989 8.7e-63 243.4 120 100.0
CAN.G118.19 Capsicum annuum HOM05D002744 ORTHO05D008989 3.4e-14 82.0 48 85.4
PGSC0003DMG400010239 Solanum tuberosum HOM05D002744 ORTHO05D008989 5.4e-12 74.7 48 77.1
Peaxi162Scf00284g00123 Petunia axillaris HOM05D002744 ORTHO05D008989 7.0e-12 74.3 48 75.0
Solyc02g076790.4 Solanum lycopersicum HOM05D002744 ORTHO05D008989 1.6e-11 73.2 48 72.9
Sopen02g021690 Solanum pennellii HOM05D002744 ORTHO05D008989 1.6e-11 73.2 48 72.9
Nitab4.5_0000928g0050 Nicotiana tabacum HOM05D002744 ORTHO05D008989 4.5e-11 71.6 48 72.9
Nitab4.5_0000263g0100 Nicotiana tabacum HOM05D002744 ORTHO05D008989 1.0e-10 70.5 48 70.8
Gohir.A05G332500 Gossypium hirsutum HOM05D002744 ORTHO05D008989 6.1e-08 61.2 47 59.6
Duzib114G0765 Durio zibethinus HOM05D002744 ORTHO05D008989 1.4e-07 60.1 47 57.4
Ciclev10032836m.g Citrus clementina HOM05D002744 ORTHO05D008989 1.8e-07 59.7 47 61.7
Gohir.D04G071200 Gossypium hirsutum HOM05D002744 ORTHO05D008989 1.8e-07 59.7 47 57.4
Gorai.012G080100 Gossypium raimondii HOM05D002744 ORTHO05D008989 1.8e-07 59.7 47 57.4
Hma1.2p1_1240F.1_g269640 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 8.9e-07 57.4 54 53.7
Prupe.2G259500 Prunus persica HOM05D002744 ORTHO05D008989 1.2e-06 57.0 47 59.6
Thecc.10G007100 Theobroma cacao HOM05D002744 ORTHO05D008989 1.2e-06 57.0 47 55.3
CSS0017108 Camellia sinensis var. sinensis HOM05D002744 ORTHO05D006546 1.5e-06 56.6 54 53.7
SGA_v2.0_scaffold36G14267 Striga asiatica HOM05D002744 ORTHO05D008989 1.5e-06 56.6 54 50.0
Hma1.2p1_0322F.1_g124790 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 2.6e-06 55.8 46 65.2
Actinidia00986 Actinidia chinensis HOM05D002744 ORTHO05D008989 3.4e-06 55.5 47 55.3
CsaV3_5G010720 Cucumis sativus L. HOM05D002744 ORTHO05D008989 3.4e-06 55.5 47 55.3
QL08p064284 Quercus lobata HOM05D002744 ORTHO05D008989 3.4e-06 55.5 47 59.6
Rhsim09G0182800 Rhododendron simsii HOM05D002744 ORTHO05D008989 5.7e-06 54.7 53 52.8
CiPaw.02G197300 Carya illinoinensis HOM05D002744 ORTHO05D008989 7.5e-06 54.3 47 55.3
Eucgr.G03110 Eucalyptus grandis HOM05D002744 ORTHO05D008989 7.5e-06 54.3 44 63.6
MD07G1229300 Malus domestica HOM05D002744 ORTHO05D008989 7.5e-06 54.3 46 56.5
GSVIVG01032723001 Vitis vinifera HOM05D002744 ORTHO05D008989 7.5e-06 54.3 47 55.3
Migut.A01076 Erythranthe guttata HOM05D002744 ORTHO05D008989 9.8e-06 53.9 54 51.9


User provided reference genes

Program Settings