Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g043070.4 Solanum lycopersicum HOM05D007136 ORTHO05D008986 1.1e-130 469.9 239 100.0
Sopen06g013560 Solanum pennellii HOM05D007136 ORTHO05D008986 7.4e-130 467.2 239 99.2
Nitab4.5_0000931g0010 Nicotiana tabacum HOM05D007136 ORTHO05D008986 6.1e-108 394.4 239 82.8
Nitab4.5_0000065g0080 Nicotiana tabacum HOM05D007136 ORTHO05D008986 2.5e-101 372.5 239 79.9
Peaxi162Scf00658g00728 Petunia axillaris HOM05D007136 ORTHO05D008986 1.2e-95 353.6 236 78.4
Cc02_g07990 Coffea canephora HOM05D007136 ORTHO05D008986 2.6e-90 335.9 239 69.0
Rhsim09G0165500 Rhododendron simsii HOM05D007136 ORTHO05D008986 1.3e-89 333.6 238 67.6
vmacro10240 Vaccinium macrocarpon HOM05D007136 ORTHO05D008986 1.8e-88 329.7 239 65.3
Dinv26003 Davidia involucrata HOM05D007136 ORTHO05D008986 3.5e-87 325.5 238 67.6
Hma1.2p1_0683F.1_g202870 Hydrangea macrophylla HOM05D007136 ORTHO05D008986 5.0e-86 321.6 239 64.4
Hma1.2p1_0683F.1_g202860 Hydrangea macrophylla HOM05D007136 ORTHO05D008986 4.7e-84 315.1 245 62.9
CSS0005502 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 1.8e-83 313.2 264 59.1
CSS0027543 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 2.3e-83 312.8 264 58.7
DCAR_027635 Daucus carota HOM05D007136 ORTHO05D008986 2.0e-79 299.7 239 61.5
Actinidia29223 Actinidia chinensis HOM05D007136 ORTHO05D008986 7.8e-79 297.7 238 62.2
MSTRG.8246 Avicennia marina HOM05D007136 ORTHO05D008986 1.5e-77 293.5 239 61.1
Cfa001492 Carpinus fangiana HOM05D007136 ORTHO05D008986 1.5e-77 293.5 238 59.2
ECA238G4577 Erigeron canadensis HOM05D007136 ORTHO05D008986 4.3e-77 292.0 238 58.8
Haze_17049 Corylus avellana HOM05D007136 ORTHO05D008986 9.5e-77 290.8 238 59.2
GSVIVG01016535001 Vitis vinifera HOM05D007136 ORTHO05D008986 9.5e-77 290.8 238 60.1
TAR633G2090 Trochodendron aralioides HOM05D000330 ORTHO05D008986 3.6e-76 288.9 238 59.7
SalBow6G2062 Salvia bowleyana HOM05D007136 ORTHO05D008986 8.0e-76 287.7 239 59.0
CANSAT56G3368 Cannabis sativa HOM05D007136 ORTHO05D008986 1.5e-74 283.5 238 58.8
Lsat_1_v5_gn_2_119701 Lactuca sativa HOM05D007136 ORTHO05D008986 2.6e-74 282.7 239 59.8
Ciclev10032197m.g Citrus clementina HOM05D007136 ORTHO05D008986 9.8e-74 280.8 238 57.6
Migut.F01500 Erythranthe guttata HOM05D007136 ORTHO05D008986 9.8e-74 280.8 239 57.7
CiPaw.01G285300 Carya illinoinensis HOM05D007136 ORTHO05D008986 2.2e-73 279.6 238 57.6
Thecc.10G044100 Theobroma cacao HOM05D007136 ORTHO05D008986 2.2e-73 279.6 238 55.9
TWI15G0021 Tripterygium wilfordii HOM05D007136 ORTHO05D008986 2.9e-73 279.3 238 56.3
Nn2g10391 Nelumbo nucifera HOM05D007136 ORTHO05D008986 6.4e-73 278.1 238 55.5
HanXRQChr14g0458151 Helianthus annuus HOM05D007136 ORTHO05D008986 1.1e-72 277.3 239 57.3
RcHm_v2.0_Chr1g0366511 Rosa chinensis HOM05D007136 ORTHO05D008986 1.4e-72 276.9 238 55.0
Prupe.2G233400 Prunus persica HOM05D007136 ORTHO05D008986 9.2e-72 274.2 238 55.5
Glyma.18G289500 Glycine max HOM05D007136 ORTHO05D008986 3.9e-70 268.9 238 53.8
SGA_v2.0_scaffold86G26943 Striga asiatica HOM05D007136 ORTHO05D008986 8.6e-70 267.7 239 56.5
Gohir.D10G226000 Gossypium hirsutum HOM05D007136 ORTHO05D008986 1.1e-69 267.3 238 52.1
Atru.chr12.462 Acer truncatum HOM05D007136 ORTHO05D008986 1.5e-69 266.9 238 54.6
Gorai.011G257200 Gossypium raimondii HOM05D007136 ORTHO05D008986 1.5e-69 266.9 238 52.1
Ca_07254_v3 Cicer arietinum L. HOM05D007136 ORTHO05D008986 3.3e-69 265.8 238 55.9
Gohir.A10G217300 Gossypium hirsutum HOM05D007136 ORTHO05D008986 4.3e-69 265.4 238 52.1
Psat3g181320 Pisum sativum HOM05D007136 ORTHO05D008986 1.2e-68 263.8 238 55.9
Atru.chr12.484 Acer truncatum HOM05D007136 ORTHO05D008986 1.6e-68 263.5 238 53.8
ATR0559G284 Amborella trichopoda HOM05D007136 ORTHO05D008986 1.6e-68 263.5 238 54.6
FAN01G1850 Fragaria x ananassa HOM05D007136 ORTHO05D008986 1.6e-68 263.5 238 54.2
FvH4_7g22120 Fragaria vesca HOM05D007136 ORTHO05D008986 2.1e-68 263.1 238 53.8
VMungo1383G1564 Vigna mungo HOM05D007136 ORTHO05D008986 2.8e-68 262.7 238 54.6
FAN01G1261 Fragaria x ananassa HOM05D007136 ORTHO05D008986 4.7e-68 261.9 238 53.4
FAN06G2040 Fragaria x ananassa HOM05D007136 ORTHO05D008986 8.0e-68 261.2 238 53.4
Lj4C909G7 Lonicera japonica HOM05D007136 ORTHO05D008986 8.0e-68 261.2 217 59.0
TPR.G15525 Trifolium pratense HOM05D007136 ORTHO05D008986 8.0e-68 261.2 238 54.2
Medtr7g024560 Medicago truncatula HOM05D007136 ORTHO05D008986 1.4e-67 260.4 238 53.8
Potri.010G205900 Populus trichocarpa HOM05D007136 ORTHO05D008986 1.8e-67 260.0 238 52.9
Lj1g0011729 Lotus japonicus HOM05D007136 ORTHO05D008986 6.8e-67 258.1 238 54.6
MD07G1196400 Malus domestica HOM05D007136 ORTHO05D008986 8.9e-67 257.7 238 52.9
FAN06G2061 Fragaria x ananassa HOM05D007136 ORTHO05D008986 1.2e-66 257.3 238 52.9
arahy.Tifrunner.gnm1.ann1.IQ4HGL Arachis hypogaea HOM05D007136 ORTHO05D008986 2.0e-66 256.5 240 55.0
arahy.Tifrunner.gnm1.ann1.RSMT0C Arachis hypogaea HOM05D007136 ORTHO05D008986 2.0e-66 256.5 240 55.0
AUR62038352 Chenopodium quinoa HOM05D007136 ORTHO05D008986 2.6e-66 256.1 238 53.4
Cpa.g.sc1.397 Carica papaya HOM05D007136 ORTHO05D008986 4.4e-66 255.4 239 54.0
Phvul.008G012700 Phaseolus vulgaris HOM05D007136 ORTHO05D008986 4.4e-66 255.4 238 53.8
PGR044G0021 Punica granatum HOM05D007136 ORTHO05D008986 8.3e-65 251.1 238 51.7
FAN03G0232 Fragaria x ananassa HOM05D007136 ORTHO05D008986 1.9e-64 250.0 238 52.1
EL10Ac2g03388 Beta vulgaris HOM05D007136 ORTHO05D008986 4.1e-64 248.8 251 52.2
Aqoxy2G02097 Aquilegia oxysepala HOM05D007136 ORTHO05D008986 5.4e-64 248.4 239 52.3
Lalb_Chr10g0091721 Lupinus albus HOM05D007136 ORTHO05D008986 1.0e-62 244.2 238 50.4
Hund20032 Selenicereus undatus HOM05D007136 ORTHO05D008986 1.0e-62 244.2 238 52.9
QL08p059192 Quercus lobata HOM05D007136 ORTHO05D008986 3.9e-62 242.3 360 40.6
Ah.16g107010 Amaranthus hybridus HOM05D007136 ORTHO05D008986 1.6e-60 236.9 238 49.6
Sed0006263 Sechium edule HOM05D007136 ORTHO05D008986 2.8e-60 236.1 238 48.7
ClCG09G019950 Citrullus lanatus HOM05D007136 ORTHO05D008986 1.8e-59 233.4 238 48.7
COL.COLO4_14997 Corchorus olitorius HOM05D007136 ORTHO05D008986 3.1e-59 232.6 268 47.4
Sabra10G0159100 Salix brachista HOM05D007136 ORTHO05D008986 6.8e-59 231.5 284 44.7
MBI05_g22899_MAGBIO Magnolia biondii HOM05D007136 ORTHO05D008986 3.4e-58 229.2 223 51.6
A05p43340 Brassica napus HOM05D007136 ORTHO05D008986 4.9e-57 225.3 240 47.1
BraA05t23073Z Brassica rapa HOM05D007136 ORTHO05D008986 4.9e-57 225.3 240 47.1
THA.LOC104799346 Tarenaya hassleriana HOM05D007136 ORTHO05D008986 4.9e-57 225.3 239 47.3
C05p63040 Brassica napus HOM05D007136 ORTHO05D008986 8.3e-57 224.6 240 47.1
BolC5t34957H Brassica oleracea HOM05D007136 ORTHO05D008986 8.3e-57 224.6 240 47.1
Aa31LG5G14590 Aethionema arabicum HOM05D007136 ORTHO05D008986 1.1e-56 224.2 239 48.1
PSO151G0201 Papaver somniferum HOM05D007136 ORTHO05D008986 3.2e-56 222.6 233 50.6
Sp3g03000 Schrenkiella parvula HOM05D007136 ORTHO05D008986 1.2e-55 220.7 240 47.1
CsaV3_5G026510 Cucumis sativus L. HOM05D007136 ORTHO05D008986 6.0e-55 218.4 240 47.1
PSO339G3352 Papaver somniferum HOM05D007136 ORTHO05D008986 2.3e-54 216.5 233 49.8
AT3G04020 Arabidopsis thaliana HOM05D007136 ORTHO05D008986 6.6e-54 214.9 240 46.7
MELO3C021650.2 Cucumis melo HOM05D007136 ORTHO05D008986 8.6e-54 214.5 240 46.7
Carub.0003s0327 Capsella rubella HOM05D007136 ORTHO05D008986 1.6e-52 210.3 240 44.6
CARHR078150 Cardamine hirsuta HOM05D007136 ORTHO05D008986 2.8e-52 209.5 240 43.8
AL3G13930 Arabidopsis lyrata HOM05D007136 ORTHO05D008986 3.6e-52 209.1 240 45.4
Thhalv10021212m.g Eutrema salsugineum HOM05D007136 ORTHO05D008986 1.2e-50 204.1 240 43.8
HPP92_001682 Vanilla planifolia HOM05D007136 ORTHO05D008986 1.5e-50 203.8 239 46.0
BcaC05g30543 Brassica carinata HOM05D007136 ORTHO05D008986 2.6e-50 203.0 222 46.4
Os03g0276600 Oryza sativa ssp. japonica HOM05D007136 ORTHO05D008986 9.9e-50 201.1 240 45.0
unitig_736.g22315 Utricularia gibba HOM05D007136 ORTHO05D008986 2.2e-49 199.9 223 50.7
Glyma.02G092900 Glycine max HOM05D007136 ORTHO05D008986 7.8e-47 191.4 238 42.4
Eucgr.J00020 Eucalyptus grandis HOM05D007136 ORTHO05D008986 5.1e-46 188.7 164 55.5
SEGI_31981 Sequoiadendron giganteum HOM05D007136 ORTHO05D008986 4.7e-44 182.2 234 40.2
CDE09G1315 Ceratophyllum demersum HOM05D007136 ORTHO05D008986 6.9e-43 178.3 240 41.7
Dinv31448 Davidia involucrata HOM05D007136 ORTHO05D008986 2.2e-41 173.3 153 57.5
Manes.07G114900 Manihot esculenta HOM05D007136 ORTHO05D008986 4.9e-41 172.2 168 51.8
Sc09g0007080 Simmondsia chinensis HOM05D007136 ORTHO05D008986 1.5e-37 160.6 168 48.8
Zm00001eb012480 Zea mays HOM05D007136 ORTHO05D008986 7.6e-34 148.3 240 38.3
Pp3c12_11030 Physcomitrium patens HOM05D007136 ORTHO05D008986 5.1e-30 135.6 234 33.8
Duzib106G1934 Durio zibethinus HOM05D007136 ORTHO05D008986 4.8e-28 129.0 105 57.1
AUR62041861 Chenopodium quinoa HOM05D007136 ORTHO05D008986 6.9e-27 125.2 113 54.0
Mapoly0002s0030 Marchantia polymorpha HOM05D007136 ORTHO05D008986 4.2e-24 115.9 243 28.0
AUR62041862 Chenopodium quinoa HOM05D007136 ORTHO05D008986 5.0e-09 65.9 49 61.2
SHI07863 Sapria himalayana HOM05D007136 ORTHO05D008986 3.6e-07 59.7 58 48.3


User provided reference genes

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