Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g043060.1 Solanum lycopersicum HOM05D007136 ORTHO05D008986 1.9e-39 165.2 77 100.0
Sopen06g013560 Solanum pennellii HOM05D007136 ORTHO05D008986 4.2e-34 147.5 68 100.0
Peaxi162Scf00658g00728 Petunia axillaris HOM05D007136 ORTHO05D008986 5.6e-31 137.1 68 92.6
CAN.G1401.1 Capsicum annuum HOM05D007136 ORTHO05D008986 1.2e-28 129.4 71 87.3
Nitab4.5_0000931g0010 Nicotiana tabacum HOM05D007136 ORTHO05D008986 5.8e-28 127.1 68 83.8
Nitab4.5_0000065g0080 Nicotiana tabacum HOM05D007136 ORTHO05D008986 1.7e-27 125.6 68 83.8
SGA_v2.0_scaffold86G26943 Striga asiatica HOM05D007136 ORTHO05D008986 1.7e-27 125.6 68 82.4
Lsat_1_v5_gn_2_119701 Lactuca sativa HOM05D007136 ORTHO05D008986 4.9e-27 124.0 68 79.4
MSTRG.8246 Avicennia marina HOM05D007136 ORTHO05D008986 8.4e-27 123.2 68 79.4
Actinidia29223 Actinidia chinensis HOM05D007136 ORTHO05D008986 1.1e-26 122.9 68 79.4
vmacro10240 Vaccinium macrocarpon HOM05D007136 ORTHO05D008986 1.4e-26 122.5 68 79.4
Rhsim09G0165500 Rhododendron simsii HOM05D007136 ORTHO05D008986 1.9e-26 122.1 67 80.6
HanXRQChr14g0458151 Helianthus annuus HOM05D007136 ORTHO05D008986 2.5e-26 121.7 67 79.1
Cc02_g07990 Coffea canephora HOM05D007136 ORTHO05D008986 3.2e-26 121.3 67 80.6
QL08p059192 Quercus lobata HOM05D007136 ORTHO05D008986 9.3e-26 119.8 67 77.6
Dinv26003 Davidia involucrata HOM05D007136 ORTHO05D008986 1.2e-25 119.4 67 77.6
Migut.F01500 Erythranthe guttata HOM05D007136 ORTHO05D008986 1.2e-25 119.4 68 76.5
CiPaw.01G285300 Carya illinoinensis HOM05D007136 ORTHO05D008986 4.6e-25 117.5 67 74.6
GSVIVG01016535001 Vitis vinifera HOM05D007136 ORTHO05D008986 4.6e-25 117.5 67 76.1
Nn2g10391 Nelumbo nucifera HOM05D007136 ORTHO05D008986 6.0e-25 117.1 67 76.1
ECA238G4577 Erigeron canadensis HOM05D007136 ORTHO05D008986 1.0e-24 116.3 62 82.3
Glyma.18G289500 Glycine max HOM05D007136 ORTHO05D008986 1.3e-24 115.9 67 73.1
CSS0002221 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 1.8e-24 115.5 67 77.6
PGR044G0021 Punica granatum HOM05D007136 ORTHO05D008986 1.8e-24 115.5 67 76.1
Hma1.2p1_0683F.1_g202870 Hydrangea macrophylla HOM05D007136 ORTHO05D008986 2.3e-24 115.2 67 74.6
Medtr7g024560 Medicago truncatula HOM05D007136 ORTHO05D008986 2.3e-24 115.2 67 71.6
TAR633G2090 Trochodendron aralioides HOM05D000330 ORTHO05D008986 3.0e-24 114.8 67 73.1
CANSAT56G3368 Cannabis sativa HOM05D007136 ORTHO05D008986 5.1e-24 114.0 67 70.1
Ca_07254_v3 Cicer arietinum L. HOM05D007136 ORTHO05D008986 5.1e-24 114.0 67 70.1
Lj1g0011729 Lotus japonicus HOM05D007136 ORTHO05D008986 5.1e-24 114.0 67 74.6
Psat3g181320 Pisum sativum HOM05D007136 ORTHO05D008986 5.1e-24 114.0 67 70.1
CSS0010171 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 6.7e-24 113.6 67 76.1
Eucgr.J00020 Eucalyptus grandis HOM05D007136 ORTHO05D008986 6.7e-24 113.6 67 70.1
Atru.chr12.462 Acer truncatum HOM05D007136 ORTHO05D008986 8.7e-24 113.2 67 73.1
SalBow6G2062 Salvia bowleyana HOM05D007136 ORTHO05D008986 8.7e-24 113.2 68 72.1
VMungo1383G1564 Vigna mungo HOM05D007136 ORTHO05D008986 8.7e-24 113.2 67 70.1
Phvul.008G012700 Phaseolus vulgaris HOM05D007136 ORTHO05D008986 1.1e-23 112.8 67 70.1
Potri.010G205900 Populus trichocarpa HOM05D007136 ORTHO05D008986 1.1e-23 112.8 67 73.1
Lalb_Chr10g0091721 Lupinus albus HOM05D007136 ORTHO05D008986 1.9e-23 112.1 67 70.1
Thecc.10G044100 Theobroma cacao HOM05D007136 ORTHO05D008986 3.3e-23 111.3 63 74.6
arahy.Tifrunner.gnm1.ann1.IQ4HGL Arachis hypogaea HOM05D007136 ORTHO05D008986 4.3e-23 110.9 68 67.6
arahy.Tifrunner.gnm1.ann1.RSMT0C Arachis hypogaea HOM05D007136 ORTHO05D008986 4.3e-23 110.9 68 67.6
MD07G1196400 Malus domestica HOM05D007136 ORTHO05D008986 4.3e-23 110.9 67 70.1
RcHm_v2.0_Chr1g0366511 Rosa chinensis HOM05D007136 ORTHO05D008986 5.7e-23 110.5 67 70.1
Atru.chr12.484 Acer truncatum HOM05D007136 ORTHO05D008986 7.4e-23 110.2 67 71.6
Sabra10G0159100 Salix brachista HOM05D007136 ORTHO05D008986 7.4e-23 110.2 67 71.6
unitig_736.g22315 Utricularia gibba HOM05D007136 ORTHO05D008986 7.4e-23 110.2 65 73.8
Ciclev10032197m.g Citrus clementina HOM05D007136 ORTHO05D008986 9.6e-23 109.8 67 71.6
Haze_17049 Corylus avellana HOM05D007136 ORTHO05D008986 9.6e-23 109.8 78 64.1
Manes.07G114900 Manihot esculenta HOM05D007136 ORTHO05D008986 1.3e-22 109.4 67 68.7
Prupe.2G233400 Prunus persica HOM05D007136 ORTHO05D008986 1.3e-22 109.4 67 70.1
MELO3C021650.2 Cucumis melo HOM05D007136 ORTHO05D008986 1.6e-22 109.0 68 67.6
Duzib106G1934 Durio zibethinus HOM05D007136 ORTHO05D008986 1.6e-22 109.0 63 73.0
DCAR_027635 Daucus carota HOM05D007136 ORTHO05D008986 2.1e-22 108.6 67 71.6
CsaV3_5G026510 Cucumis sativus L. HOM05D007136 ORTHO05D008986 3.7e-22 107.8 68 67.6
FvH4_7g22120 Fragaria vesca HOM05D007136 ORTHO05D008986 4.8e-22 107.5 67 65.7
FAN01G1261 Fragaria x ananassa HOM05D007136 ORTHO05D008986 4.8e-22 107.5 67 65.7
FAN03G0232 Fragaria x ananassa HOM05D007136 ORTHO05D008986 4.8e-22 107.5 67 65.7
FAN06G2040 Fragaria x ananassa HOM05D007136 ORTHO05D008986 4.8e-22 107.5 67 65.7
Ah.16g107010 Amaranthus hybridus HOM05D007136 ORTHO05D008986 6.3e-22 107.1 68 64.7
TPR.G15525 Trifolium pratense HOM05D007136 ORTHO05D008986 6.3e-22 107.1 67 68.7
EL10Ac2g03388 Beta vulgaris HOM05D007136 ORTHO05D008986 8.2e-22 106.7 68 67.6
PSO339G3352 Papaver somniferum HOM05D007136 ORTHO05D008986 8.2e-22 106.7 68 66.2
FAN06G2061 Fragaria x ananassa HOM05D007136 ORTHO05D008986 1.1e-21 106.3 68 63.2
AUR62041862 Chenopodium quinoa HOM05D007136 ORTHO05D008986 1.8e-21 105.5 67 67.2
AUR62038352 Chenopodium quinoa HOM05D007136 ORTHO05D008986 3.1e-21 104.8 67 65.7
ClCG09G019950 Citrullus lanatus HOM05D007136 ORTHO05D008986 3.1e-21 104.8 68 66.2
Gohir.A10G217300 Gossypium hirsutum HOM05D007136 ORTHO05D008986 3.1e-21 104.8 63 69.8
Gohir.D10G226000 Gossypium hirsutum HOM05D007136 ORTHO05D008986 3.1e-21 104.8 63 69.8
Gorai.011G257200 Gossypium raimondii HOM05D007136 ORTHO05D008986 3.1e-21 104.8 63 69.8
Aqoxy2G02097 Aquilegia oxysepala HOM05D007136 ORTHO05D008986 5.3e-21 104.0 63 69.8
FAN01G1850 Fragaria x ananassa HOM05D007136 ORTHO05D008986 5.3e-21 104.0 67 64.2
TWI15G0021 Tripterygium wilfordii HOM05D007136 ORTHO05D008986 6.9e-21 103.6 67 65.7
Sed0006263 Sechium edule HOM05D007136 ORTHO05D008986 1.2e-20 102.8 67 64.2
PSO151G0201 Papaver somniferum HOM05D007136 ORTHO05D008986 1.5e-20 102.4 67 64.2
COL.COLO4_14997 Corchorus olitorius HOM05D007136 ORTHO05D008986 2.6e-20 101.7 77 59.7
FAN10G3057 Fragaria x ananassa HOM05D007136 ORTHO05D025577 4.5e-20 100.9 68 60.3
Dinv31448 Davidia involucrata HOM05D007136 ORTHO05D008986 1.7e-19 99.0 56 76.8
CDE09G1315 Ceratophyllum demersum HOM05D007136 ORTHO05D008986 5.0e-19 97.4 60 68.3
HPP92_001682 Vanilla planifolia HOM05D007136 ORTHO05D008986 5.5e-18 94.0 64 62.5
THA.LOC104799346 Tarenaya hassleriana HOM05D007136 ORTHO05D008986 4.6e-17 90.9 65 60.0
CARHR078150 Cardamine hirsuta HOM05D007136 ORTHO05D008986 1.3e-16 89.4 67 55.2
Zm00001eb012480 Zea mays HOM05D007136 ORTHO05D008986 1.3e-16 89.4 63 58.7
Sc09g0007080 Simmondsia chinensis HOM05D007136 ORTHO05D008986 1.8e-16 89.0 52 69.2
BcaC05g30543 Brassica carinata HOM05D007136 ORTHO05D008986 2.3e-16 88.6 67 56.7
C05p63040 Brassica napus HOM05D007136 ORTHO05D008986 2.3e-16 88.6 67 56.7
BolC5t34957H Brassica oleracea HOM05D007136 ORTHO05D008986 2.3e-16 88.6 67 56.7
BraA05t23073Z Brassica rapa HOM05D007136 ORTHO05D008986 2.3e-16 88.6 67 56.7
Thhalv10021212m.g Eutrema salsugineum HOM05D007136 ORTHO05D008986 2.3e-16 88.6 67 56.7
Hund20032 Selenicereus undatus HOM05D007136 ORTHO05D008986 2.3e-16 88.6 52 71.2
Sp3g03000 Schrenkiella parvula HOM05D007136 ORTHO05D008986 3.0e-16 88.2 67 56.7
AL3G13930 Arabidopsis lyrata HOM05D007136 ORTHO05D008986 3.9e-16 87.8 67 55.2
Aa31LG5G14590 Aethionema arabicum HOM05D007136 ORTHO05D008986 6.7e-16 87.0 73 53.4
Os03g0276600 Oryza sativa ssp. japonica HOM05D007136 ORTHO05D008986 6.7e-16 87.0 59 59.3
Carub.0003s0327 Capsella rubella HOM05D007136 ORTHO05D008986 1.1e-15 86.3 67 52.2
MBI05_g22899_MAGBIO Magnolia biondii HOM05D007136 ORTHO05D008986 2.6e-12 75.1 52 65.4
SEGI_31981 Sequoiadendron giganteum HOM05D007136 ORTHO05D008986 1.7e-11 72.4 56 50.0
ATR0559G284 Amborella trichopoda HOM05D007136 ORTHO05D008986 3.8e-11 71.2 52 59.6
A05p43340 Brassica napus HOM05D007136 ORTHO05D008986 1.1e-10 69.7 52 55.8
Cfa001492 Carpinus fangiana HOM05D007136 ORTHO05D008986 1.4e-08 62.8 31 77.4


User provided reference genes

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