Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g043035.1 Solanum lycopersicum HOM05D008016 ORTHO05D004271 1.1e-56 223.0 107 100.0
BraSC59t46557Z Brassica rapa HOM05D008016 ORTHO05D004271 4.6e-23 111.3 87 69.0
Gohir.1Z049482 Gossypium hirsutum HOM05D008016 ORTHO05D004271 1.0e-22 110.2 63 84.1
Migut.A01208 Erythranthe guttata HOM05D008016 ORTHO05D004271 3.0e-22 108.6 56 92.9
Nitab4.5_0005831g0110 Nicotiana tabacum HOM05D008016 ORTHO05D011667 3.9e-22 108.2 66 81.8
Lsat_1_v5_gn_4_63021 Lactuca sativa HOM05D007952 ORTHO05D009823 5.1e-22 107.8 55 94.5
Nitab4.5_0001170g0110 Nicotiana tabacum HOM05D008016 ORTHO05D004271 5.1e-22 107.8 64 81.2
Gohir.A09G103364 Gossypium hirsutum HOM05D008016 ORTHO05D004271 1.3e-20 103.2 55 90.9
Nitab4.5_0007400g0090 Nicotiana tabacum HOM05D008016 ORTHO05D004271 1.3e-20 103.2 103 58.3
BolSC29t60557H Brassica oleracea HOM05D008016 ORTHO05D010588 3.7e-20 101.7 87 63.2
BolSC35t60714H Brassica oleracea HOM05D008016 ORTHO05D004271 3.7e-20 101.7 87 63.2
BolSC46t60968H Brassica oleracea HOM05D008016 ORTHO05D010588 3.7e-20 101.7 87 63.2
BraSC103t45418Z Brassica rapa HOM05D008016 ORTHO05D010588 3.7e-20 101.7 87 63.2
BraSC103t45496Z Brassica rapa HOM05D008016 ORTHO05D004271 3.7e-20 101.7 87 63.2
BraSC25t45901Z Brassica rapa HOM05D008016 ORTHO05D010588 3.7e-20 101.7 87 63.2
Gohir.A13G086605 Gossypium hirsutum HOM05D008016 ORTHO05D004271 6.2e-20 100.9 55 89.1
Gohir.A07G174766 Gossypium hirsutum HOM05D008016 ORTHO05D004271 1.1e-19 100.1 50 92.0
RcHm_v2.0_Chr4g0392721 Rosa chinensis HOM05D008016 ORTHO05D004271 4.0e-19 98.2 64 76.6
C04p22520 Brassica napus HOM05D008016 ORTHO05D004271 5.3e-19 97.8 55 85.5
BolSC45t60920H Brassica oleracea HOM05D008016 ORTHO05D010588 5.3e-19 97.8 55 85.5
BraSC25t45922Z Brassica rapa HOM05D008016 ORTHO05D010588 5.3e-19 97.8 55 85.5
Sed0000469 Sechium edule HOM05D010190 ORTHO05D009823 1.5e-18 96.3 104 52.9
Sed0006309 Sechium edule HOM05D010190 ORTHO05D009823 1.5e-18 96.3 104 52.9
Sed0014465 Sechium edule HOM05D010190 ORTHO05D004271 1.5e-18 96.3 104 52.9
BolSC44t60833H Brassica oleracea HOM05D008016 ORTHO05D004271 2.6e-18 95.5 54 85.2
Ca_02733_v3 Cicer arietinum L. HOM05D008016 ORTHO05D009823 2.9e-17 92.0 78 66.7
Lalb_Chr15g0080721 Lupinus albus HOM05D008016 ORTHO05D004271 1.4e-16 89.7 56 82.1
Lalb_Chr03g0039361 Lupinus albus HOM05D008016 ORTHO05D004271 5.5e-16 87.8 54 83.3
Gohir.A09G101825 Gossypium hirsutum HOM05D008016 ORTHO05D004271 3.9e-14 81.6 44 86.4
RcHm_v2.0_Chr7g0221131 Rosa chinensis HOM05D008016 ORTHO05D004271 1.1e-13 80.1 52 80.8
Migut.D01400 Erythranthe guttata HOM05D007952 ORTHO05D009823 1.5e-13 79.7 43 88.4
BolSC35t60682H Brassica oleracea HOM05D008016 ORTHO05D010588 3.7e-12 75.1 37 91.9
Lsat_1_v5_gn_2_98441 Lactuca sativa HOM05D008016 ORTHO05D004271 1.4e-11 73.2 42 83.3
Glyma.15G274900 Glycine max HOM05D008016 ORTHO05D004271 1.5e-10 69.7 44 75.0
Nitab4.5_0004841g0080 Nicotiana tabacum HOM05D008037 ORTHO05D004271 1.5e-10 69.7 36 88.9
Solyc11g044665.1 Solanum lycopersicum HOM05D008016 ORTHO05D004271 1.3e-09 66.6 64 57.8
arahy.Tifrunner.gnm1.ann1.KSIE27 Arachis hypogaea HOM05D008037 ORTHO05D004271 8.4e-09 63.9 35 82.9
Lalb_Chr20g0115041 Lupinus albus HOM05D008016 ORTHO05D004271 7.1e-08 60.8 35 82.9
BraSC179t45783Z Brassica rapa HOM05D008016 ORTHO05D004271 2.7e-07 58.9 81 48.1
Sopen10g016570 Solanum pennellii HOM05D008037 ORTHO05D004271 2.7e-07 58.9 36 77.8
Gohir.1Z049580 Gossypium hirsutum HOM05D008016 ORTHO05D004271 3.9e-06 55.1 35 77.1


User provided reference genes

Program Settings