Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g033850.3 Solanum lycopersicum HOM05D000661 ORTHO05D391348 6.2e-54 213.8 101 100.0
Nitab4.5_0001175g0090 Nicotiana tabacum HOM05D000661 ORTHO05D000502 9.7e-07 57.0 42 61.9
Nitab4.5_0006541g0020 Nicotiana tabacum HOM05D000661 ORTHO05D000502 9.7e-07 57.0 42 61.9
Lj4C32G1 Lonicera japonica HOM05D000661 ORTHO05D000502 1.7e-06 56.2 42 59.5
AL2G35470 Arabidopsis lyrata HOM05D000661 ORTHO05D000502 6.3e-06 54.3 42 59.5
AT1G75490 Arabidopsis thaliana HOM05D000661 ORTHO05D000502 6.3e-06 54.3 42 59.5
BcaB05g24912 Brassica carinata HOM05D000661 ORTHO05D000502 6.3e-06 54.3 42 59.5
BcaC03g15580 Brassica carinata HOM05D000661 ORTHO05D000502 6.3e-06 54.3 42 59.5
A07p41030 Brassica napus HOM05D000661 ORTHO05D000502 6.3e-06 54.3 42 59.5
C02p32650 Brassica napus HOM05D000661 ORTHO05D000502 6.3e-06 54.3 42 59.5
BolC6t39988H Brassica oleracea HOM05D000661 ORTHO05D000502 6.3e-06 54.3 42 59.5
BraA02t07035Z Brassica rapa HOM05D000661 ORTHO05D000502 6.3e-06 54.3 42 59.5
BraA07t31641Z Brassica rapa HOM05D000661 ORTHO05D000502 6.3e-06 54.3 42 59.5
Carub.0002s2235 Capsella rubella HOM05D000661 ORTHO05D000502 6.3e-06 54.3 42 59.5
CiPaw.07G155400 Carya illinoinensis HOM05D000661 ORTHO05D000502 6.3e-06 54.3 48 56.2
Aa31LG4G5730 Aethionema arabicum HOM05D000661 ORTHO05D000502 8.2e-06 53.9 42 59.5
arahy.Tifrunner.gnm1.ann1.15RNTX Arachis hypogaea HOM05D000661 ORTHO05D000502 8.2e-06 53.9 42 59.5
BcaB02g07024 Brassica carinata HOM05D000661 ORTHO05D000502 8.2e-06 53.9 42 59.5
BcaC08g45578 Brassica carinata HOM05D000661 ORTHO05D000502 8.2e-06 53.9 42 59.5
A07p28820 Brassica napus HOM05D000661 ORTHO05D000502 8.2e-06 53.9 42 59.5
BolC6t38382H Brassica oleracea HOM05D000661 ORTHO05D000502 8.2e-06 53.9 42 59.5
BraA07t30525Z Brassica rapa HOM05D000661 ORTHO05D000502 8.2e-06 53.9 42 59.5
CSS0024600 Camellia sinensis var. sinensis HOM05D000661 ORTHO05D000502 8.2e-06 53.9 42 59.5
Ca_05543_v3 Cicer arietinum L. HOM05D000661 ORTHO05D000502 8.2e-06 53.9 42 59.5
Ca_13387_v3 Cicer arietinum L. HOM05D000661 ORTHO05D000502 8.2e-06 53.9 42 59.5
ClCG08G014650 Citrullus lanatus HOM05D000661 ORTHO05D000502 8.2e-06 53.9 42 59.5
MELO3C010977.2 Cucumis melo HOM05D000661 ORTHO05D000502 8.2e-06 53.9 42 59.5
Thhalv10019142m.g Eutrema salsugineum HOM05D000661 ORTHO05D000502 8.2e-06 53.9 42 59.5
Glyma.04G028100 Glycine max HOM05D000661 ORTHO05D000502 8.2e-06 53.9 42 59.5
Glyma.06G028300 Glycine max HOM05D000661 ORTHO05D000502 8.2e-06 53.9 42 59.5
Lj1g0014649 Lotus japonicus HOM05D000661 ORTHO05D000502 8.2e-06 53.9 42 59.5
Lj5g0005125 Lotus japonicus HOM05D000661 ORTHO05D000502 8.2e-06 53.9 42 59.5
Lalb_Chr24g0398851 Lupinus albus HOM05D000661 ORTHO05D000502 8.2e-06 53.9 42 59.5
Medtr1g023170 Medicago truncatula HOM05D000661 ORTHO05D000502 8.2e-06 53.9 42 59.5
Nitab4.5_0001840g0030 Nicotiana tabacum HOM05D000661 ORTHO05D000502 8.2e-06 53.9 42 59.5
Nitab4.5_0002156g0060 Nicotiana tabacum HOM05D000661 ORTHO05D000502 8.2e-06 53.9 42 59.5
Peaxi162Scf00189g00141 Petunia axillaris HOM05D000661 ORTHO05D000502 8.2e-06 53.9 42 59.5
Phvul.009G013200 Phaseolus vulgaris HOM05D000661 ORTHO05D000502 8.2e-06 53.9 42 59.5
Psat6g006200 Pisum sativum HOM05D000661 ORTHO05D000502 8.2e-06 53.9 42 59.5
Rhsim07G0244000 Rhododendron simsii HOM05D000661 ORTHO05D000502 8.2e-06 53.9 42 59.5
Sp5g30620 Schrenkiella parvula HOM05D000661 ORTHO05D000502 8.2e-06 53.9 42 59.5
Sed0027003 Sechium edule HOM05D000661 ORTHO05D000502 8.2e-06 53.9 42 59.5
Solyc04g080910.1 Solanum lycopersicum HOM05D000661 ORTHO05D000502 8.2e-06 53.9 42 59.5
Sopen04g034520 Solanum pennellii HOM05D000661 ORTHO05D000502 8.2e-06 53.9 42 59.5
PGSC0003DMG400003706 Solanum tuberosum HOM05D000661 ORTHO05D000502 8.2e-06 53.9 42 59.5
THA.LOC104809063 Tarenaya hassleriana HOM05D000661 ORTHO05D000502 8.2e-06 53.9 42 59.5
TPR.G30478 Trifolium pratense HOM05D000661 ORTHO05D000502 8.2e-06 53.9 42 59.5
vmacro04315 Vaccinium macrocarpon HOM05D000661 ORTHO05D000502 8.2e-06 53.9 42 59.5
VMungo1309G2990 Vigna mungo HOM05D000661 ORTHO05D000502 8.2e-06 53.9 42 59.5


User provided reference genes

Program Settings