Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g031690.4 Solanum lycopersicum HOM05D006517 ORTHO05D007886 1.1e-50 203.0 102 100.0
Nitab4.5_0000987g0010 Nicotiana tabacum HOM05D006517 ORTHO05D007886 1.5e-47 192.6 102 94.1
Nitab4.5_0005239g0010 Nicotiana tabacum HOM05D006517 ORTHO05D007886 1.3e-46 189.5 102 92.2
CAN.G55.2 Capsicum annuum HOM05D006517 ORTHO05D007886 5.9e-44 180.6 102 88.2
Migut.J00866 Erythranthe guttata HOM05D006517 ORTHO05D007886 3.3e-39 164.9 101 80.2
Oeu000272.2 Olea europaea HOM05D006517 ORTHO05D007886 3.3e-39 164.9 99 79.8
Actinidia39602 Actinidia chinensis HOM05D006517 ORTHO05D007886 8.2e-38 160.2 99 78.8
Oeu000950.1 Olea europaea HOM05D006517 ORTHO05D007886 1.8e-37 159.1 101 77.2
SalBow6G1494 Salvia bowleyana HOM05D006517 ORTHO05D007886 3.1e-37 158.3 102 76.5
SGA_v2.0_scaffold31G12706 Striga asiatica HOM05D006517 ORTHO05D007886 3.1e-37 158.3 101 76.2
HanXRQChr09g0258421 Helianthus annuus HOM05D006517 ORTHO05D007886 7.0e-37 157.1 101 76.2
Phvul.003G125800 Phaseolus vulgaris HOM05D006517 ORTHO05D007886 9.1e-37 156.8 95 78.9
Atru.chr7.1806 Acer truncatum HOM05D006517 ORTHO05D007886 1.6e-36 156.0 102 75.5
Cc09_g04380 Coffea canephora HOM05D006517 ORTHO05D007886 2.7e-36 155.2 98 76.5
Potri.018G047000 Populus trichocarpa HOM05D006517 ORTHO05D007886 4.5e-36 154.5 95 78.9
ECA232G0292 Erigeron canadensis HOM05D001622 ORTHO05D002989 5.9e-36 154.1 100 77.0
Lj4g0027818 Lotus japonicus HOM05D006517 ORTHO05D007886 5.9e-36 154.1 94 78.7
Lalb_Chr13g0299091 Lupinus albus HOM05D006517 ORTHO05D007886 7.7e-36 153.7 94 78.7
VMungo1215G1783 Vigna mungo HOM05D006517 ORTHO05D007886 1.3e-35 152.9 95 77.9
Ca_21351_v3 Cicer arietinum L. HOM05D006517 ORTHO05D007886 1.7e-35 152.5 93 79.6
Potri.006G217100 Populus trichocarpa HOM05D006517 ORTHO05D007886 1.7e-35 152.5 94 77.7
Glyma.13G116000 Glycine max HOM05D006517 ORTHO05D007886 2.2e-35 152.1 94 76.6
SGA_v2.0_scaffold318G48507 Striga asiatica HOM05D006517 ORTHO05D007886 2.9e-35 151.8 98 73.5
TPR.G12541 Trifolium pratense HOM05D006517 ORTHO05D007886 2.9e-35 151.8 94 77.7
Cpa.g.sc82.30 Carica papaya HOM05D006517 ORTHO05D007886 3.8e-35 151.4 95 78.9
GSVIVG01000273001 Vitis vinifera HOM05D006517 ORTHO05D007886 3.8e-35 151.4 95 76.8
Lsat_1_v5_gn_8_118080 Lactuca sativa HOM05D006517 ORTHO05D007886 5.0e-35 151.0 100 77.0
Medtr4g124370 Medicago truncatula HOM05D006517 ORTHO05D007886 5.0e-35 151.0 94 76.6
COL.COLO4_21178 Corchorus olitorius HOM05D006517 ORTHO05D007886 1.1e-34 149.8 93 78.5
Glyma.17G043800 Glycine max HOM05D006517 ORTHO05D007886 1.1e-34 149.8 94 76.6
Duzib187G0844 Durio zibethinus HOM05D006517 ORTHO05D007886 1.9e-34 149.1 95 73.7
CSS0016512 Camellia sinensis var. sinensis HOM05D006517 ORTHO05D007886 2.5e-34 148.7 99 76.8
Manes.03G055100 Manihot esculenta HOM05D006517 ORTHO05D007886 2.5e-34 148.7 95 75.8
RcHm_v2.0_Chr2g0096541 Rosa chinensis HOM05D006517 ORTHO05D007886 2.5e-34 148.7 92 77.2
Hund08920 Selenicereus undatus HOM05D006517 ORTHO05D007886 2.5e-34 148.7 94 75.5
MD02G1105800 Malus domestica HOM05D006517 ORTHO05D007886 3.2e-34 148.3 92 78.3
Prupe.7G189300 Prunus persica HOM05D006517 ORTHO05D007886 3.2e-34 148.3 92 77.2
TAR383G1010 Trochodendron aralioides HOM05D006517 ORTHO05D007886 3.2e-34 148.3 101 70.3
MD15G1225700 Malus domestica HOM05D006517 ORTHO05D007886 4.2e-34 147.9 93 76.3
MBI13_g05966_MAGBIO Magnolia biondii HOM05D006517 ORTHO05D007886 5.5e-34 147.5 93 76.3
Thecc.09G067300 Theobroma cacao HOM05D006517 ORTHO05D007886 5.5e-34 147.5 95 75.8
CANSAT56G3804 Cannabis sativa HOM05D006517 ORTHO05D007886 7.2e-34 147.1 95 73.7
QL11p003516 Quercus lobata HOM05D006517 ORTHO05D007886 9.4e-34 146.7 92 77.2
Ciclev10009053m.g Citrus clementina HOM05D006517 ORTHO05D007886 1.2e-33 146.4 92 72.8
Duzib150G1397 Durio zibethinus HOM05D006517 ORTHO05D007886 1.2e-33 146.4 95 74.7
Duzib168G1027 Durio zibethinus HOM05D006517 ORTHO05D007886 1.6e-33 146.0 94 75.5
FvH4_1g09680 Fragaria vesca HOM05D006517 ORTHO05D007886 2.1e-33 145.6 92 73.9
FAN26G1998 Fragaria x ananassa HOM05D006517 ORTHO05D007886 2.1e-33 145.6 92 73.9
FAN23G1398 Fragaria x ananassa HOM05D006517 ORTHO05D007886 4.7e-33 144.4 92 72.8
unitig_26.g9120 Utricularia gibba HOM05D006517 ORTHO05D007886 4.7e-33 144.4 98 71.4
EL10Ac8g18944 Beta vulgaris HOM05D006517 ORTHO05D007886 6.1e-33 144.1 93 74.2
CiPaw.03G198900 Carya illinoinensis HOM05D006517 ORTHO05D007886 6.1e-33 144.1 92 76.1
Eucgr.C00754 Eucalyptus grandis HOM05D006517 ORTHO05D007886 6.1e-33 144.1 92 75.0
AUR62025324 Chenopodium quinoa HOM05D006517 ORTHO05D007886 8.0e-33 143.7 99 70.7
Sc18g0002960 Simmondsia chinensis HOM05D006517 ORTHO05D007886 8.0e-33 143.7 93 74.2
Cfa010680 Carpinus fangiana HOM05D006517 ORTHO05D007886 1.4e-32 142.9 95 73.7
MELO3C015558.2 Cucumis melo HOM05D006517 ORTHO05D007886 1.4e-32 142.9 91 75.8
PSO675G5415 Papaver somniferum HOM05D006517 ORTHO05D007886 2.3e-32 142.1 92 75.0
Sp4g06310 Schrenkiella parvula HOM05D006517 ORTHO05D007886 2.3e-32 142.1 92 72.8
Aqoxy7G00916 Aquilegia oxysepala HOM05D006517 ORTHO05D007886 3.0e-32 141.7 95 72.6
C04p55990 Brassica napus HOM05D006517 ORTHO05D007886 3.0e-32 141.7 93 72.0
BolC4t27132H Brassica oleracea HOM05D006517 ORTHO05D007886 3.0e-32 141.7 93 72.0
AL4G18760 Arabidopsis lyrata HOM05D006517 ORTHO05D007886 4.0e-32 141.4 99 66.7
A04p20280 Brassica napus HOM05D006517 ORTHO05D007886 4.0e-32 141.4 93 72.0
BraA04t17607Z Brassica rapa HOM05D006517 ORTHO05D007886 4.0e-32 141.4 93 72.0
Dinv42443 Davidia involucrata HOM05D006517 ORTHO05D007886 4.0e-32 141.4 98 71.4
Gohir.D08G268100 Gossypium hirsutum HOM05D006517 ORTHO05D007886 5.2e-32 141.0 92 70.7
Gorai.004G285800 Gossypium raimondii HOM05D006517 ORTHO05D007886 5.2e-32 141.0 92 70.7
PSO541G2149 Papaver somniferum HOM05D006517 ORTHO05D007886 5.2e-32 141.0 92 73.9
Aa31LG5G9580 Aethionema arabicum HOM05D006517 ORTHO05D007886 6.8e-32 140.6 92 71.7
Os07g0618600 Oryza sativa ssp. japonica HOM05D006517 ORTHO05D007886 6.8e-32 140.6 93 69.9
Sed0014627 Sechium edule HOM05D006517 ORTHO05D007886 6.8e-32 140.6 90 76.7
THA.LOC104804445 Tarenaya hassleriana HOM05D006517 ORTHO05D007886 6.8e-32 140.6 101 67.3
AT2G26210 Arabidopsis thaliana HOM05D006517 ORTHO05D007886 1.2e-31 139.8 99 66.7
CANSAT56G0784 Cannabis sativa HOM05D006517 ORTHO05D007886 1.2e-31 139.8 95 71.6
CsaV3_1G041470 Cucumis sativus L. HOM05D006517 ORTHO05D007886 1.5e-31 139.4 91 72.5
Ah.09g228830 Amaranthus hybridus HOM05D006517 ORTHO05D007886 2.0e-31 139.0 93 69.9
ClCG03G014700 Citrullus lanatus HOM05D006517 ORTHO05D007886 2.0e-31 139.0 95 70.5
Nn8g38504 Nelumbo nucifera HOM05D006517 ORTHO05D007886 3.4e-31 138.3 94 69.1
CDE05G1274 Ceratophyllum demersum HOM05D006517 ORTHO05D007886 4.4e-31 137.9 94 71.3
Zm00001eb327610 Zea mays HOM05D006517 ORTHO05D007886 7.5e-31 137.1 92 70.7
Carub.0004s0605 Capsella rubella HOM05D006517 ORTHO05D007886 1.7e-30 136.0 93 67.7
CARHR115040 Cardamine hirsuta HOM05D006517 ORTHO05D007886 1.7e-30 136.0 98 66.3
Gohir.A08G246900 Gossypium hirsutum HOM05D006517 ORTHO05D007886 2.2e-30 135.6 92 68.5
PGR124G0001 Punica granatum HOM05D006517 ORTHO05D007886 4.1e-29 131.3 91 69.2
PGR142G0057 Punica granatum HOM05D006517 ORTHO05D007886 4.1e-29 131.3 91 69.2
ATR0006G021 Amborella trichopoda HOM05D006517 ORTHO05D007886 5.4e-29 131.0 93 66.7
Mapoly0086s0040 Marchantia polymorpha HOM05D006517 ORTHO05D007886 1.6e-28 129.4 96 61.5
BcaNung07167 Brassica carinata HOM05D006517 ORTHO05D007886 2.7e-28 128.6 93 67.7
SMO117G0175 Selaginella moellendorffii HOM05D006517 ORTHO05D007886 2.7e-28 128.6 92 66.3
Rhsim05G0081000 Rhododendron simsii HOM05D006517 ORTHO05D007886 9.5e-26 120.2 145 51.0
Actinidia39601 Actinidia chinensis HOM05D006517 ORTHO05D007886 1.2e-25 119.8 77 76.6
DCAR_010521 Daucus carota HOM05D006517 ORTHO05D007886 5.7e-23 110.9 71 74.6
Pp3c18_11010 Physcomitrium patens HOM05D006517 ORTHO05D007886 5.7e-23 110.9 90 56.7
FAN19G3155 Fragaria x ananassa HOM05D006517 ORTHO05D007886 1.3e-22 109.8 92 60.9
FAN26G3113 Fragaria x ananassa HOM05D006517 ORTHO05D007886 1.3e-22 109.8 92 60.9
FAN28G2617 Fragaria x ananassa HOM05D006517 ORTHO05D007886 1.3e-22 109.8 92 60.9
Sabra06G0167400 Salix brachista HOM05D006517 ORTHO05D007886 1.7e-22 109.4 71 74.6
FAN23G2301 Fragaria x ananassa HOM05D006517 ORTHO05D007886 2.8e-22 108.6 92 59.8
arahy.Tifrunner.gnm1.ann1.2S6U7G Arachis hypogaea HOM05D006517 ORTHO05D007886 1.1e-21 106.7 76 69.7
HPP92_002174 Vanilla planifolia HOM05D000872 ORTHO05D007886 1.1e-21 106.7 76 67.1
Thhalv10002200m.g Eutrema salsugineum HOM05D006517 ORTHO05D007886 1.6e-20 102.8 92 56.5
AUR62028338 Chenopodium quinoa HOM05D000417 ORTHO05D007886 2.0e-20 102.4 74 67.6
Peaxi162Scf00658g00031 Petunia axillaris HOM05D000115 ORTHO05D000464 1.1e-18 96.7 70 72.9
Medtr5g081760 Medicago truncatula HOM05D006517 ORTHO05D007886 1.5e-15 86.3 82 53.7
CBR_g36802 Chara braunii HOM05D006517 ORTHO05D007886 8.3e-14 80.5 75 52.0
Medtr4g036440 Medicago truncatula HOM05D006517 ORTHO05D007886 2.7e-12 75.5 86 47.7
Psat4g020160 Pisum sativum HOM05D006517 ORTHO05D007886 2.7e-12 75.5 47 74.5
Medtr8g098885 Medicago truncatula HOM05D006517 ORTHO05D007886 6.0e-12 74.3 50 68.0
arahy.Tifrunner.gnm1.ann1.0410DC Arachis hypogaea HOM05D006517 ORTHO05D007886 1.0e-11 73.6 55 67.3
Haze_03605 Corylus avellana HOM05D006517 ORTHO05D007886 1.6e-09 66.2 71 52.1
vmacro13145 Vaccinium macrocarpon HOM05D006517 ORTHO05D007886 8.0e-09 63.9 94 44.7
HPP92_002241 Vanilla planifolia HOM05D000872 ORTHO05D000777 2.0e-07 59.3 41 63.4


User provided reference genes

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