Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g019190.1 Solanum lycopersicum HOM05D009760 ORTHO05D011985 3.3e-158 561.6 278 100.0
Sopen11g024340 Solanum pennellii HOM05D000176 ORTHO05D000106 1.1e-97 360.5 332 61.4
Solyc08g150134.1 Solanum lycopersicum HOM05D009760 ORTHO05D011985 4.3e-89 332.0 322 59.6
Sopen08g017050 Solanum pennellii HOM05D009760 ORTHO05D011985 1.0e-69 267.7 229 65.5
Solyc12g019090.2 Solanum lycopersicum HOM05D009760 ORTHO05D011985 3.3e-57 226.1 262 52.7
PGSC0003DMG400042873 Solanum tuberosum HOM05D009760 ORTHO05D011985 4.4e-57 225.7 204 62.3
Solyc04g055060.3 Solanum lycopersicum HOM05D009760 ORTHO05D011985 2.8e-48 196.4 177 61.0
PGSC0003DMG400042790 Solanum tuberosum HOM05D009760 ORTHO05D011985 5.9e-46 188.7 213 53.1
PGSC0003DMG400025394 Solanum tuberosum HOM05D009760 ORTHO05D011985 5.7e-41 172.2 187 51.9
Sopen12g009290 Solanum pennellii HOM05D000176 ORTHO05D000106 7.7e-30 135.2 221 42.1
Solyc07g017370.3 Solanum lycopersicum HOM05D009760 ORTHO05D011985 5.2e-26 122.5 249 39.4
Solyc04g015660.3 Solanum lycopersicum HOM05D009760 ORTHO05D011985 1.5e-25 120.9 240 38.8
Sopen07g006080 Solanum pennellii HOM05D009760 ORTHO05D011985 2.8e-24 116.7 54 92.6
Solyc05g026090.1 Solanum lycopersicum HOM05D009760 ORTHO05D011985 4.5e-22 109.4 54 88.9
Sopen01g005940 Solanum pennellii HOM05D009760 ORTHO05D011985 5.0e-21 105.9 54 85.2
Solyc09g018930.1 Solanum lycopersicum HOM05D009760 ORTHO05D011985 1.6e-19 100.9 108 58.3
Sopen04g007750 Solanum pennellii HOM05D009760 ORTHO05D051285 1.8e-18 97.4 70 72.9
PGSC0003DMG400042867 Solanum tuberosum HOM05D009760 ORTHO05D011985 4.9e-16 89.4 185 35.7
PGSC0003DMG400037963 Solanum tuberosum HOM05D009760 ORTHO05D051285 2.7e-14 83.6 50 80.0
Sopen03g007260 Solanum pennellii HOM05D000176 ORTHO05D000106 1.2e-11 74.7 152 37.5
Sopen05g012180 Solanum pennellii HOM05D009760 ORTHO05D011985 1.2e-11 74.7 116 46.6
CSS0048918 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 4.7e-11 72.8 54 55.6
CSS0042023 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 6.2e-11 72.4 51 58.8
CSS0006036 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 8.0e-11 72.0 54 55.6
CSS0007867 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 8.0e-11 72.0 54 55.6
CSS0030233 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 8.0e-11 72.0 54 55.6
CSS0036437 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 8.0e-11 72.0 54 55.6
PGSC0003DMG400044254 Solanum tuberosum HOM05D009760 ORTHO05D011985 1.1e-10 71.6 86 50.0
Sopen06g009210 Solanum pennellii HOM05D000176 ORTHO05D000106 3.1e-10 70.1 159 34.6
CSS0004167 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 5.2e-10 69.3 54 53.7
CSS0011501 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 5.2e-10 69.3 54 53.7
CSS0024487 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 5.2e-10 69.3 54 53.7
CSS0026564 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 5.2e-10 69.3 54 53.7
Solyc05g026100.1 Solanum lycopersicum HOM05D009760 ORTHO05D011985 5.2e-10 69.3 110 40.9
QL01p023632 Quercus lobata HOM05D000176 ORTHO05D000106 8.9e-10 68.6 72 40.3
Lj1g0015263 Lotus japonicus HOM05D000176 ORTHO05D000106 9.8e-09 65.1 52 55.8
Solyc07g150136.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 1.3e-08 64.7 55 52.7
CSS0028824 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.7e-08 64.3 58 46.6
Solyc10g051090.3 Solanum lycopersicum HOM05D006072 ORTHO05D007363 2.2e-08 63.9 55 52.7
CSS0049024 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 2.9e-08 63.5 54 50.0
QL09p003987 Quercus lobata HOM05D000176 ORTHO05D003511 2.9e-08 63.5 65 43.1
QL04p015528 Quercus lobata HOM05D000176 ORTHO05D000106 3.7e-08 63.2 68 44.1
QL05p044352 Quercus lobata HOM05D000176 ORTHO05D000106 3.7e-08 63.2 68 44.1
QL05p061710 Quercus lobata HOM05D010675 ORTHO05D014145 3.7e-08 63.2 68 44.1
QL05p088783 Quercus lobata HOM05D000176 ORTHO05D000106 3.7e-08 63.2 68 44.1
QL07p012019 Quercus lobata HOM05D000176 ORTHO05D000106 3.7e-08 63.2 68 44.1
QL08p003348 Quercus lobata HOM05D000176 ORTHO05D000106 3.7e-08 63.2 68 44.1
QL08p007762 Quercus lobata HOM05D000176 ORTHO05D000106 3.7e-08 63.2 68 44.1
QL08p013497 Quercus lobata HOM05D000017 ORTHO05D007253 3.7e-08 63.2 68 44.1
TWI75G0639 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 3.7e-08 63.2 92 42.4
Solyc12g056671.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 4.9e-08 62.8 64 45.3
PGSC0003DMG400010948 Solanum tuberosum HOM05D000176 ORTHO05D000106 4.9e-08 62.8 55 52.7
Solyc05g024385.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 6.4e-08 62.4 55 50.9
Solyc08g016802.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 6.4e-08 62.4 55 47.3
Sopen06g004480 Solanum pennellii HOM05D000176 ORTHO05D000106 6.4e-08 62.4 55 47.3
Sopen06g017070 Solanum pennellii HOM05D000176 ORTHO05D000106 6.4e-08 62.4 55 47.3
PGSC0003DMG400011463 Solanum tuberosum HOM05D000176 ORTHO05D000106 8.3e-08 62.0 55 47.3
PGSC0003DMG400025677 Solanum tuberosum HOM05D000176 ORTHO05D000106 8.3e-08 62.0 55 47.3
PGSC0003DMG400027876 Solanum tuberosum HOM05D000176 ORTHO05D000106 8.3e-08 62.0 55 47.3
QL10p029699 Quercus lobata HOM05D002292 ORTHO05D008330 1.1e-07 61.6 72 36.1
QL10p063859 Quercus lobata HOM05D000176 ORTHO05D000106 1.1e-07 61.6 68 42.6
Solyc12g032920.3 Solanum lycopersicum HOM05D009760 ORTHO05D000106 1.1e-07 61.6 135 34.1
Lj1g0006892 Lotus japonicus HOM05D000176 ORTHO05D000106 1.4e-07 61.2 52 51.9
Oeu017988.1 Olea europaea HOM05D000176 ORTHO05D000106 1.4e-07 61.2 54 44.4
Solyc04g150170.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 1.4e-07 61.2 55 50.9
Solyc12g042607.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 1.9e-07 60.8 55 45.5
Cc00_g31110 Coffea canephora HOM05D000176 ORTHO05D000106 2.4e-07 60.5 70 41.4
QL11p013596 Quercus lobata HOM05D000176 ORTHO05D000106 2.4e-07 60.5 136 29.4
PGSC0003DMG400000655 Solanum tuberosum HOM05D000176 ORTHO05D000106 2.4e-07 60.5 55 45.5
Migut.M01636 Erythranthe guttata HOM05D000176 ORTHO05D000106 3.2e-07 60.1 54 44.4
Solyc01g081584.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 3.2e-07 60.1 55 47.3
Solyc03g005550.3 Solanum lycopersicum HOM05D000176 ORTHO05D000106 3.2e-07 60.1 55 47.3
Solyc05g026520.2 Solanum lycopersicum HOM05D000176 ORTHO05D000106 3.2e-07 60.1 55 47.3
Solyc10g008267.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 3.2e-07 60.1 55 47.3
Sopen01g009560 Solanum pennellii HOM05D000176 ORTHO05D000695 3.2e-07 60.1 57 45.6
Sopen01g011760 Solanum pennellii HOM05D000176 ORTHO05D000106 3.2e-07 60.1 55 47.3
Sopen01g034990 Solanum pennellii HOM05D000176 ORTHO05D000106 3.2e-07 60.1 55 47.3
Sopen03g022250 Solanum pennellii HOM05D000176 ORTHO05D000106 3.2e-07 60.1 55 47.3
Sopen04g029940 Solanum pennellii HOM05D000176 ORTHO05D000106 3.2e-07 60.1 55 47.3
Sopen09g029870 Solanum pennellii HOM05D000176 ORTHO05D000106 3.2e-07 60.1 55 47.3
Sopen12g008340 Solanum pennellii HOM05D000176 ORTHO05D000106 3.2e-07 60.1 55 47.3
CSS0021846 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 4.1e-07 59.7 57 47.4
CSS0044124 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 4.1e-07 59.7 57 47.4
Peaxi162Scf00058g00819 Petunia axillaris HOM05D000176 ORTHO05D000106 4.1e-07 59.7 131 32.8
QL02p042411 Quercus lobata HOM05D002707 ORTHO05D002925 4.1e-07 59.7 99 32.3
QL10p044969 Quercus lobata HOM05D000176 ORTHO05D000106 4.1e-07 59.7 72 34.7
Solyc11g044453.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 4.1e-07 59.7 55 47.3
PGSC0003DMG400029935 Solanum tuberosum HOM05D000176 ORTHO05D000106 4.1e-07 59.7 55 49.1
QL01p028314 Quercus lobata HOM05D000176 ORTHO05D000106 5.4e-07 59.3 68 36.8
QL03p010974 Quercus lobata HOM05D003881 ORTHO05D004343 5.4e-07 59.3 72 34.7
QL03p030217 Quercus lobata HOM05D000176 ORTHO05D000106 5.4e-07 59.3 72 34.7
QL09p009005 Quercus lobata HOM05D000176 ORTHO05D000106 5.4e-07 59.3 72 34.7
QL10p021459 Quercus lobata HOM05D000176 ORTHO05D000106 5.4e-07 59.3 72 34.7
QL11p038845 Quercus lobata HOM05D000176 ORTHO05D000106 5.4e-07 59.3 80 37.5
Rhsim10G0041500 Rhododendron simsii HOM05D000176 ORTHO05D000106 5.4e-07 59.3 52 50.0
Sed0010925 Sechium edule HOM05D000176 ORTHO05D000106 5.4e-07 59.3 71 39.4
Sed0015346 Sechium edule HOM05D000176 ORTHO05D000106 5.4e-07 59.3 71 38.0
Sed0027921 Sechium edule HOM05D012029 ORTHO05D014680 5.4e-07 59.3 56 44.6
Solyc05g044513.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 5.4e-07 59.3 57 49.1
Solyc07g044815.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 5.4e-07 59.3 55 47.3
QL01p018788 Quercus lobata HOM05D000176 ORTHO05D000106 7.1e-07 58.9 68 39.7
QL02p053683 Quercus lobata HOM05D000176 ORTHO05D000106 7.1e-07 58.9 72 34.7
CSS0025783 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 9.2e-07 58.5 57 47.4
CSS0037304 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 9.2e-07 58.5 57 47.4
CSS0043966 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 9.2e-07 58.5 57 47.4
Lj2g0026406 Lotus japonicus HOM05D000176 ORTHO05D000106 9.2e-07 58.5 52 50.0
QL05p048284 Quercus lobata HOM05D000176 ORTHO05D000106 9.2e-07 58.5 65 43.1
QL07p004315 Quercus lobata HOM05D000176 ORTHO05D000106 9.2e-07 58.5 68 36.8
QL08p006787 Quercus lobata HOM05D000176 ORTHO05D000106 9.2e-07 58.5 67 41.8
QL10p058009 Quercus lobata HOM05D000176 ORTHO05D000106 9.2e-07 58.5 67 41.8
QL93p0107_0380 Quercus lobata HOM05D000370 ORTHO05D001335 9.2e-07 58.5 68 36.8
Solyc08g067125.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 9.2e-07 58.5 55 45.5
Peaxi162Scf00038g02647 Petunia axillaris HOM05D000115 ORTHO05D003511 1.6e-06 57.8 52 51.9
RhsimUnG0046100 Rhododendron simsii HOM05D000176 ORTHO05D000106 1.6e-06 57.8 53 43.4
MELO3C030761.2 Cucumis melo HOM05D000176 ORTHO05D000106 2.1e-06 57.4 59 42.4
QL04p053141 Quercus lobata HOM05D000176 ORTHO05D000106 2.1e-06 57.4 68 36.8
QL04p066053 Quercus lobata HOM05D000176 ORTHO05D000106 2.1e-06 57.4 68 36.8
QL05p078397 Quercus lobata HOM05D000070 ORTHO05D000106 2.1e-06 57.4 68 36.8
QL06p040368 Quercus lobata HOM05D000176 ORTHO05D000106 2.1e-06 57.4 68 36.8
QL08p031423 Quercus lobata HOM05D000176 ORTHO05D009654 2.1e-06 57.4 68 39.7
QL12p023375 Quercus lobata HOM05D000176 ORTHO05D000106 2.1e-06 57.4 68 36.8
QL12p031843 Quercus lobata HOM05D000176 ORTHO05D000106 2.1e-06 57.4 68 36.8
QL93p0164_0014 Quercus lobata HOM05D000176 ORTHO05D000106 2.1e-06 57.4 68 36.8
CSS0045961 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 2.7e-06 57.0 57 45.6
Oeu049412.1 Olea europaea HOM05D000176 ORTHO05D000106 2.7e-06 57.0 54 38.9
Oeu049415.1 Olea europaea HOM05D000176 ORTHO05D000106 2.7e-06 57.0 54 38.9
QL03p014985 Quercus lobata HOM05D001365 ORTHO05D001291 2.7e-06 57.0 68 38.2
CSS0010546 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 3.5e-06 56.6 42 52.4
CAN.G362.39 Capsicum annuum HOM05D000176 ORTHO05D000106 3.5e-06 56.6 52 48.1
QL03p015444 Quercus lobata HOM05D000176 ORTHO05D000106 3.5e-06 56.6 68 36.8
QL04p089247 Quercus lobata HOM05D000176 ORTHO05D000106 3.5e-06 56.6 68 36.8
QL05p031734 Quercus lobata HOM05D000176 ORTHO05D000106 3.5e-06 56.6 68 36.8
QL05p088131 Quercus lobata HOM05D000176 ORTHO05D000106 3.5e-06 56.6 68 38.2
QL06p043010 Quercus lobata HOM05D000529 ORTHO05D000472 3.5e-06 56.6 68 38.2
QL08p034398 Quercus lobata HOM05D000176 ORTHO05D000106 3.5e-06 56.6 68 38.2
QL93p2017_0003 Quercus lobata HOM05D000176 ORTHO05D000106 3.5e-06 56.6 68 36.8
SHI45281 Sapria himalayana HOM05D000176 ORTHO05D000106 3.5e-06 56.6 52 44.2
SGA_v2.0_scaffold42G15967 Striga asiatica HOM05D000176 ORTHO05D000106 3.5e-06 56.6 55 40.0
Peaxi162Scf00464g00118 Petunia axillaris HOM05D000176 ORTHO05D000106 4.6e-06 56.2 235 27.2
Solyc12g006100.2 Solanum lycopersicum HOM05D000176 ORTHO05D000106 4.6e-06 56.2 51 45.1
PGSC0003DMG400034839 Solanum tuberosum HOM05D000176 ORTHO05D000106 4.6e-06 56.2 73 39.7
TWI79G1140 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 4.6e-06 56.2 63 44.4
Peaxi162Scf00351g00224 Petunia axillaris HOM05D000176 ORTHO05D000106 6.0e-06 55.8 247 26.7
Cc05_g12610 Coffea canephora HOM05D000176 ORTHO05D000106 7.8e-06 55.5 51 39.2
MELO3C030021.2 Cucumis melo HOM05D000176 ORTHO05D000106 7.8e-06 55.5 51 43.1
MELO3C034271.2 Cucumis melo HOM05D000176 ORTHO05D009654 7.8e-06 55.5 51 43.1
QL02p018295 Quercus lobata HOM05D000176 ORTHO05D000106 7.8e-06 55.5 68 38.2
QL11p043362 Quercus lobata HOM05D000176 ORTHO05D000106 7.8e-06 55.5 68 38.2
QL93p0869_0056 Quercus lobata HOM05D000176 ORTHO05D000106 7.8e-06 55.5 68 35.3
PGSC0003DMG402028807 Solanum tuberosum HOM05D000176 ORTHO05D000106 7.8e-06 55.5 239 25.5
TWI09G0559 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 7.8e-06 55.5 42 52.4
TWI31G0542 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 7.8e-06 55.5 42 52.4
TWI75G1856 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 7.8e-06 55.5 42 52.4


User provided reference genes

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