Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g010160.2 Solanum lycopersicum HOM05D000587 ORTHO05D001561 1.7e-27 125.2 60 100.0
Sopen06g004980 Solanum pennellii HOM05D000587 ORTHO05D001561 6.6e-27 123.2 60 98.3
PGSC0003DMG400021033 Solanum tuberosum HOM05D000587 ORTHO05D001561 2.2e-22 108.2 60 90.0
CAN.G312.13 Capsicum annuum HOM05D000587 ORTHO05D001561 9.5e-18 92.8 60 76.7
GSVIVG01025202001 Vitis vinifera HOM05D000587 ORTHO05D001561 1.7e-11 72.0 61 62.3
CiPaw.13G115500 Carya illinoinensis HOM05D000587 ORTHO05D001561 2.3e-11 71.6 61 63.9
TAR633G0040 Trochodendron aralioides HOM05D000587 ORTHO05D001561 3.9e-11 70.9 61 65.6
Lj3g0021482 Lotus japonicus HOM05D000587 ORTHO05D001561 1.5e-10 68.9 61 62.3
CiPaw.14G082300 Carya illinoinensis HOM05D000587 ORTHO05D001561 2.5e-10 68.2 61 62.3
Lalb_Chr01g0004361 Lupinus albus HOM05D000587 ORTHO05D001561 2.5e-10 68.2 61 63.9
ECA238G1804 Erigeron canadensis HOM05D000587 ORTHO05D001561 3.3e-10 67.8 61 63.9
HanXRQChr14g0452681 Helianthus annuus HOM05D000587 ORTHO05D001561 3.3e-10 67.8 61 62.3
Lsat_1_v5_gn_2_100441 Lactuca sativa HOM05D000587 ORTHO05D001561 4.3e-10 67.4 59 62.7
Cfa011303 Carpinus fangiana HOM05D000587 ORTHO05D001561 5.6e-10 67.0 61 63.9
Nn2g10824 Nelumbo nucifera HOM05D000587 ORTHO05D001561 9.5e-10 66.2 62 64.5
Medtr4g058860 Medicago truncatula HOM05D000587 ORTHO05D001561 1.2e-09 65.9 62 62.9
arahy.Tifrunner.gnm1.ann1.I3M5SU Arachis hypogaea HOM05D000587 ORTHO05D001561 2.1e-09 65.1 63 60.3
arahy.Tifrunner.gnm1.ann1.J71BBN Arachis hypogaea HOM05D000587 ORTHO05D001561 2.1e-09 65.1 63 60.3
CiPaw.13G115400 Carya illinoinensis HOM05D000587 ORTHO05D001561 2.8e-09 64.7 61 59.0
HanXRQChr09g0259261 Helianthus annuus HOM05D000587 ORTHO05D001561 2.8e-09 64.7 61 62.3
Psat7g192480 Pisum sativum HOM05D000587 ORTHO05D001561 2.8e-09 64.7 60 65.0
Solyc11g069540.3 Solanum lycopersicum HOM05D000587 ORTHO05D001561 2.8e-09 64.7 48 68.8
Sopen11g028250 Solanum pennellii HOM05D000587 ORTHO05D001561 2.8e-09 64.7 48 68.8
PGSC0003DMG400008085 Solanum tuberosum HOM05D000587 ORTHO05D001561 2.8e-09 64.7 48 68.8
CSS0022753 Camellia sinensis var. sinensis HOM05D000587 ORTHO05D001561 3.6e-09 64.3 60 58.3
CANSAT54G1320 Cannabis sativa HOM05D000587 ORTHO05D001561 3.6e-09 64.3 63 58.7
QL11p052047 Quercus lobata HOM05D000587 ORTHO05D001561 3.6e-09 64.3 59 59.3
Glyma.12G174700 Glycine max HOM05D000587 ORTHO05D001561 4.7e-09 63.9 62 61.3
Sed0026023 Sechium edule HOM05D000587 ORTHO05D001561 6.2e-09 63.5 60 61.7
Glyma.13G324900 Glycine max HOM05D000587 ORTHO05D001561 8.1e-09 63.2 62 59.7
QL01p021844 Quercus lobata HOM05D000587 ORTHO05D001561 8.1e-09 63.2 59 57.6
Actinidia07144 Actinidia chinensis HOM05D000587 ORTHO05D001561 1.1e-08 62.8 60 60.0
Eucgr.B02510 Eucalyptus grandis HOM05D000587 ORTHO05D001561 2.3e-08 61.6 61 62.3
Ca_19271_v3 Cicer arietinum L. HOM05D000587 ORTHO05D001561 3.1e-08 61.2 61 62.3
Lalb_Chr19g0137161 Lupinus albus HOM05D000587 ORTHO05D001561 3.1e-08 61.2 60 61.7
ClCG02G021220 Citrullus lanatus HOM05D000587 ORTHO05D001561 5.2e-08 60.5 60 60.0
Peaxi162Scf00270g00024 Petunia axillaris HOM05D000587 ORTHO05D001561 5.2e-08 60.5 48 66.7
Nitab4.5_0000181g0140 Nicotiana tabacum HOM05D000587 ORTHO05D001561 6.8e-08 60.1 38 76.3
Ciclev10028754m.g Citrus clementina HOM05D000587 ORTHO05D001561 8.9e-08 59.7 60 55.0
CsaV3_6G013970 Cucumis sativus L. HOM05D000587 ORTHO05D001561 8.9e-08 59.7 60 60.0
Manes.04G019600 Manihot esculenta HOM05D000587 ORTHO05D001561 8.9e-08 59.7 60 60.0
Nitab4.5_0003747g0020 Nicotiana tabacum HOM05D000587 ORTHO05D001561 1.2e-07 59.3 38 76.3
Potri.009G011100 Populus trichocarpa HOM05D000587 ORTHO05D001561 1.5e-07 58.9 60 61.7
TPR.G6141 Trifolium pratense HOM05D000587 ORTHO05D001561 1.5e-07 58.9 61 62.3
MELO3C025779.2 Cucumis melo HOM05D000587 ORTHO05D001561 2.0e-07 58.5 58 60.3
Lalb_Chr14g0374601 Lupinus albus HOM05D000587 ORTHO05D001561 2.0e-07 58.5 60 55.0
Ah.01g003030 Amaranthus hybridus HOM05D000020 ORTHO05D002694 2.6e-07 58.2 61 57.4
Lj3g0026079 Lotus japonicus HOM05D000587 ORTHO05D001561 2.6e-07 58.2 61 59.0
MD03G1120000 Malus domestica HOM05D000587 ORTHO05D001561 3.4e-07 57.8 61 59.0
Aqoxy1G01221 Aquilegia oxysepala HOM05D000587 ORTHO05D001561 4.4e-07 57.4 64 54.7
Medtr2g094640 Medicago truncatula HOM05D000587 ORTHO05D001561 4.4e-07 57.4 58 56.9
PGR102G0851 Punica granatum HOM05D000587 ORTHO05D001561 4.4e-07 57.4 62 59.7
Lj2A1024G55 Lonicera japonica HOM05D000587 ORTHO05D001561 7.6e-07 56.6 60 58.3
PSO135G0909 Papaver somniferum HOM05D000587 ORTHO05D001561 7.6e-07 56.6 61 62.3
PSO384G3686 Papaver somniferum HOM05D000587 ORTHO05D001561 7.6e-07 56.6 61 62.3
Phvul.005G134200 Phaseolus vulgaris HOM05D000587 ORTHO05D001561 7.6e-07 56.6 61 52.5
VMungo1080G0189 Vigna mungo HOM05D000587 ORTHO05D001561 9.9e-07 56.2 61 52.5
DCAR_018800 Daucus carota HOM05D000587 ORTHO05D001561 1.7e-06 55.5 60 60.0
Sabra09G0007000 Salix brachista HOM05D000587 ORTHO05D001561 1.7e-06 55.5 60 55.0
Cc01_g10980 Coffea canephora HOM05D000587 ORTHO05D001561 2.9e-06 54.7 53 60.4
Nn2g13119 Nelumbo nucifera HOM05D000587 ORTHO05D001561 3.7e-06 54.3 58 55.2
Potri.004G211900 Populus trichocarpa HOM05D000587 ORTHO05D001561 3.7e-06 54.3 61 57.4
Prupe.6G103500 Prunus persica HOM05D000587 ORTHO05D001561 3.7e-06 54.3 60 56.7


User provided reference genes

Program Settings