Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g009440.3 Solanum lycopersicum HOM05D030241 ORTHO05D030623 1.3e-120 436.4 215 100.0
Sopen06g004160 Solanum pennellii HOM05D000001 ORTHO05D010033 1.2e-30 137.5 203 44.8
Solyc06g009500.1 Solanum lycopersicum HOM05D000001 ORTHO05D010033 2.1e-30 136.7 203 44.8
PGSC0003DMG400007282 Solanum tuberosum HOM05D000001 ORTHO05D010033 3.3e-20 102.8 201 38.8
PGSC0003DMG400007279 Solanum tuberosum HOM05D030241 ORTHO05D030623 1.3e-19 100.9 77 70.1
CAN.G1280.38 Capsicum annuum HOM05D000001 ORTHO05D010033 2.2e-16 90.1 197 35.5
Solyc06g009420.4 Solanum lycopersicum HOM05D030241 ORTHO05D030623 4.2e-15 85.9 52 78.8
Nitab4.5_0000363g0150 Nicotiana tabacum HOM05D000001 ORTHO05D010033 2.7e-14 83.2 190 36.8
Nitab4.5_0003324g0030 Nicotiana tabacum HOM05D000001 ORTHO05D010033 1.5e-12 77.4 127 39.4
C04p62070 Brassica napus HOM05D000001 ORTHO05D010033 1.8e-10 70.5 115 40.0
Peaxi162Scf00377g00094 Petunia axillaris HOM05D000001 ORTHO05D010033 2.4e-10 70.1 169 36.7
Haze_05078 Corylus avellana HOM05D000001 ORTHO05D010033 1.2e-09 67.8 233 29.6
Phvul.008G013900 Phaseolus vulgaris HOM05D000001 ORTHO05D000003 9.9e-09 64.7 109 33.9
COL.COLO4_23192 Corchorus olitorius HOM05D000001 ORTHO05D010033 2.2e-08 63.5 163 27.6
TWI59G0523 Tripterygium wilfordii HOM05D000001 ORTHO05D010033 4.9e-08 62.4 173 26.6
Oeu047256.1 Olea europaea HOM05D000001 ORTHO05D010033 6.4e-08 62.0 133 35.3
Hma1.2p1_0012F.1_g007290 Hydrangea macrophylla HOM05D000001 ORTHO05D010435 8.4e-08 61.6 138 29.7
Solyc06g009490.3 Solanum lycopersicum HOM05D030241 ORTHO05D051251 1.1e-07 61.2 97 42.3
CANSAT25G1679 Cannabis sativa HOM05D000001 ORTHO05D010033 2.4e-07 60.1 156 30.1
Lj1g0017888 Lotus japonicus HOM05D000001 ORTHO05D000003 2.4e-07 60.1 110 30.9
MD17G1278700 Malus domestica HOM05D000001 ORTHO05D010033 2.4e-07 60.1 183 30.1
Oeu062252.1 Olea europaea HOM05D000001 ORTHO05D049442 3.2e-07 59.7 110 34.5
TPR.G4134 Trifolium pratense HOM05D000001 ORTHO05D010033 3.2e-07 59.7 195 26.2
CARHR142640 Cardamine hirsuta HOM05D000001 ORTHO05D010033 7.1e-07 58.5 154 29.9
CSS0031956 Camellia sinensis var. sinensis HOM05D000001 ORTHO05D009971 9.3e-07 58.2 203 26.1
Cfa005758 Carpinus fangiana HOM05D000001 ORTHO05D010033 1.2e-06 57.8 163 30.1
Phvul.006G091922 Phaseolus vulgaris HOM05D000001 ORTHO05D009582 1.2e-06 57.8 133 31.6
MD15G1193800 Malus domestica HOM05D000001 ORTHO05D010435 1.6e-06 57.4 175 28.0
Lj1g0002359 Lotus japonicus HOM05D000001 ORTHO05D010033 2.1e-06 57.0 162 27.2
AagrBONN_evm.TU.Sc2ySwM_117.3529 Anthoceros agrestis HOM05D000001 ORTHO05D000003 2.7e-06 56.6 167 27.5
AagrBONN_evm.TU.Sc2ySwM_228.3155 Anthoceros agrestis HOM05D000001 ORTHO05D000003 2.7e-06 56.6 137 30.7
Medtr7g109860 Medicago truncatula HOM05D000001 ORTHO05D010033 2.7e-06 56.6 173 25.4
AagrBONN_evm.TU.Sc2ySwM_344.4178 Anthoceros agrestis HOM05D000001 ORTHO05D000003 3.5e-06 56.2 178 28.1
CSS0030541 Camellia sinensis var. sinensis HOM05D000001 ORTHO05D000003 3.5e-06 56.2 175 26.9
MELO3C019783.2 Cucumis melo HOM05D000001 ORTHO05D000003 3.5e-06 56.2 148 27.0
Nn4g23148 Nelumbo nucifera HOM05D000001 ORTHO05D000003 3.5e-06 56.2 172 27.3
AagrBONN_evm.TU.Sc2ySwM_117.313 Anthoceros agrestis HOM05D000001 ORTHO05D000003 6.0e-06 55.5 115 29.6
AagrBONN_evm.TU.Sc2ySwM_117.4041 Anthoceros agrestis HOM05D000001 ORTHO05D000003 6.0e-06 55.5 160 24.4
AagrBONN_evm.TU.Sc2ySwM_344.1541 Anthoceros agrestis HOM05D000001 ORTHO05D000003 7.9e-06 55.1 157 28.0
Manes.05G012800 Manihot esculenta HOM05D000001 ORTHO05D010033 7.9e-06 55.1 181 24.9
Oeu053160.1 Olea europaea HOM05D000001 ORTHO05D010435 7.9e-06 55.1 138 27.5
Psat6g079560 Pisum sativum HOM05D000001 ORTHO05D000003 7.9e-06 55.1 180 25.0


User provided reference genes

Program Settings