Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g009120.3 Solanum lycopersicum HOM05D002674 ORTHO05D007700 4.6e-144 514.6 270 100.0
Sopen06g003880 Solanum pennellii HOM05D002674 ORTHO05D007700 5.0e-143 511.1 270 98.9
PGSC0003DMG402017938 Solanum tuberosum HOM05D002674 ORTHO05D007700 1.2e-141 506.5 270 97.8
Nitab4.5_0002470g0100 Nicotiana tabacum HOM05D002674 ORTHO05D007700 1.0e-111 407.1 279 81.4
Nitab4.5_0005805g0020 Nicotiana tabacum HOM05D002674 ORTHO05D007700 3.3e-110 402.1 275 82.2
Dinv33053 Davidia involucrata HOM05D002674 ORTHO05D007700 1.0e-87 327.4 277 64.3
CSS0049735 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D007700 5.0e-82 308.5 271 65.7
Cc01_g20810 Coffea canephora HOM05D002674 ORTHO05D007700 1.9e-81 306.6 275 67.3
Actinidia24347 Actinidia chinensis HOM05D002674 ORTHO05D007700 5.1e-79 298.5 269 62.5
Peaxi162Scf00399g00714 Petunia axillaris HOM05D002674 ORTHO05D007700 1.7e-77 293.5 311 58.8
Manes.01G218600 Manihot esculenta HOM05D002674 ORTHO05D007700 1.2e-75 287.3 274 61.3
Lj1A25T5 Lonicera japonica HOM05D002674 ORTHO05D007700 1.5e-75 287.0 273 61.2
Prupe.8G261000 Prunus persica HOM05D002674 ORTHO05D007700 2.2e-74 283.1 281 59.8
TAR365G1234 Trochodendron aralioides HOM05D002674 ORTHO05D007700 8.5e-74 281.2 268 60.8
Atru.chr5.1151 Acer truncatum HOM05D002674 ORTHO05D007700 3.2e-73 279.3 275 60.0
ClCG10G010900 Citrullus lanatus HOM05D002674 ORTHO05D007700 3.9e-71 272.3 279 57.0
RcHm_v2.0_Chr6g0293961 Rosa chinensis HOM05D002674 ORTHO05D007700 5.1e-71 271.9 278 61.9
CANSAT25G1821 Cannabis sativa HOM05D002674 ORTHO05D007700 1.5e-70 270.4 280 57.1
FAN27G2781 Fragaria x ananassa HOM05D002674 ORTHO05D007700 3.3e-70 269.2 277 57.0
CsaV3_4G000780 Cucumis sativus L. HOM05D002674 ORTHO05D007700 4.4e-70 268.9 275 56.4
CSS0000533 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D007700 9.7e-70 267.7 274 60.2
MD03G1287800 Malus domestica HOM05D002674 ORTHO05D007700 9.7e-70 267.7 280 56.1
MELO3C017958.2 Cucumis melo HOM05D002674 ORTHO05D007700 1.3e-69 267.3 275 56.0
Lsat_1_v5_gn_9_5620 Lactuca sativa HOM05D002674 ORTHO05D007700 1.7e-69 266.9 267 59.9
MD11G1310500 Malus domestica HOM05D002674 ORTHO05D007700 2.8e-69 266.2 280 57.9
FAN24G1157 Fragaria x ananassa HOM05D002674 ORTHO05D007700 3.7e-69 265.8 277 59.9
Glyma.02G018300 Glycine max HOM05D002674 ORTHO05D007700 1.1e-68 264.2 275 57.8
COL.COLO4_23350 Corchorus olitorius HOM05D002674 ORTHO05D007700 1.8e-68 263.5 277 57.0
FvH4_2g25690 Fragaria vesca HOM05D002674 ORTHO05D007700 5.3e-68 261.9 277 59.6
Gorai.004G089800 Gossypium raimondii HOM05D002674 ORTHO05D007700 5.3e-68 261.9 278 56.5
Gohir.A08G075900 Gossypium hirsutum HOM05D002674 ORTHO05D007700 7.0e-68 261.5 278 56.5
Cfa005916 Carpinus fangiana HOM05D002674 ORTHO05D007700 9.1e-68 261.2 275 60.7
Gohir.D08G085300 Gossypium hirsutum HOM05D002674 ORTHO05D007700 1.2e-67 260.8 278 56.1
CiPaw.07G108400 Carya illinoinensis HOM05D002674 ORTHO05D007700 2.0e-67 260.0 275 56.7
FAN20G3185 Fragaria x ananassa HOM05D002674 ORTHO05D007700 2.6e-67 259.6 277 59.2
HanXRQChr10g0284651 Helianthus annuus HOM05D002674 ORTHO05D007700 2.6e-67 259.6 291 54.3
Thecc.01G299900 Theobroma cacao HOM05D002674 ORTHO05D007700 5.9e-67 258.5 280 56.1
Duzib133G1209 Durio zibethinus HOM05D002674 ORTHO05D007700 1.7e-66 256.9 277 56.3
Duzib138G1545 Durio zibethinus HOM05D002674 ORTHO05D007700 1.7e-66 256.9 279 56.3
FAN15G1012 Fragaria x ananassa HOM05D002674 ORTHO05D007700 1.7e-66 256.9 277 58.8
Ciclev10021537m.g Citrus clementina HOM05D002674 ORTHO05D007700 6.5e-66 255.0 282 55.7
TWI23G1032 Tripterygium wilfordii HOM05D002674 ORTHO05D007700 1.9e-65 253.4 268 57.1
Phvul.007G146100 Phaseolus vulgaris HOM05D002674 ORTHO05D007700 6.1e-64 248.4 278 56.1
QL12p028514 Quercus lobata HOM05D002674 ORTHO05D007700 6.1e-64 248.4 299 54.5
TAR636G1278 Trochodendron aralioides HOM05D002674 ORTHO05D007700 4.0e-63 245.7 276 55.1
Lsat_1_v5_gn_7_11800 Lactuca sativa HOM05D002674 ORTHO05D007700 5.2e-63 245.4 249 60.2
Psat6g166040 Pisum sativum HOM05D002674 ORTHO05D007700 6.7e-63 245.0 273 55.3
Aqoxy5G00752 Aquilegia oxysepala HOM05D002674 ORTHO05D007700 4.8e-61 238.8 287 54.7
Glyma.10G018600 Glycine max HOM05D002674 ORTHO05D007700 1.8e-60 236.9 284 53.5
Rhsim01G0243300 Rhododendron simsii HOM05D002674 ORTHO05D007700 2.4e-60 236.5 285 53.7
Sed0013149 Sechium edule HOM05D002674 ORTHO05D007700 2.4e-60 236.5 260 56.9
CAN.G1280.1 Capsicum annuum HOM05D002674 ORTHO05D007700 4.1e-60 235.7 262 61.8
Potri.014G129500 Populus trichocarpa HOM05D002674 ORTHO05D007700 1.6e-59 233.8 277 53.8
Lj5g0010238 Lotus japonicus HOM05D002674 ORTHO05D007700 3.5e-59 232.6 278 55.8
Hma1.2p1_0491F.1_g164500 Hydrangea macrophylla HOM05D002674 ORTHO05D007700 4.5e-59 232.3 198 66.7
HPP92_025205 Vanilla planifolia HOM05D002674 ORTHO05D007700 5.9e-59 231.9 270 52.2
SGA_v2.0_scaffold1G00369 Striga asiatica HOM05D002674 ORTHO05D007700 1.7e-58 230.3 271 53.9
Ca_10339_v3 Cicer arietinum L. HOM05D002674 ORTHO05D007700 2.9e-58 229.6 276 52.2
TPR.G34010 Trifolium pratense HOM05D002674 ORTHO05D007700 1.1e-57 227.6 271 55.4
Potri.002G204700 Populus trichocarpa HOM05D002674 ORTHO05D007700 1.5e-57 227.3 282 53.5
Migut.D00215 Erythranthe guttata HOM05D002674 ORTHO05D007700 1.9e-57 226.9 272 55.5
EL10Ac7g17509 Beta vulgaris HOM05D002674 ORTHO05D007700 2.5e-57 226.5 300 50.7
MBI19_g25354_MAGBIO Magnolia biondii HOM05D002674 ORTHO05D007700 4.2e-57 225.7 285 51.6
Eucgr.K03478 Eucalyptus grandis HOM05D002674 ORTHO05D007700 1.2e-56 224.2 288 52.8
Sabra14G0096100 Salix brachista HOM05D002674 ORTHO05D007700 4.7e-56 222.2 278 51.1
DCAR_002828 Daucus carota HOM05D002674 ORTHO05D007700 8.0e-56 221.5 266 59.8
Medtr1g088580 Medicago truncatula HOM05D002674 ORTHO05D007700 2.3e-55 219.9 275 52.0
CDE11G0633 Ceratophyllum demersum HOM05D002674 ORTHO05D007700 3.0e-55 219.5 277 52.3
Sc24g0003790 Simmondsia chinensis HOM05D002674 ORTHO05D007700 1.8e-52 210.3 289 51.6
Ah.15g093240 Amaranthus hybridus HOM05D002674 ORTHO05D007700 1.2e-51 207.6 299 48.8
Nn3g21481 Nelumbo nucifera HOM05D002674 ORTHO05D007700 2.0e-51 206.8 250 54.4
VMungo0720G0138 Vigna mungo HOM05D002674 ORTHO05D007700 2.7e-51 206.5 243 53.9
CDE05G2513 Ceratophyllum demersum HOM05D002674 ORTHO05D007700 7.7e-51 204.9 276 50.0
Sabra02G0154700 Salix brachista HOM05D002674 ORTHO05D008110 5.0e-50 202.2 288 51.0
Hund18157 Selenicereus undatus HOM05D002674 ORTHO05D007700 5.0e-50 202.2 284 48.6
THA.LOC104815928 Tarenaya hassleriana HOM05D002674 ORTHO05D007700 5.0e-50 202.2 278 50.4
Lalb_Chr06g0163511 Lupinus albus HOM05D002674 ORTHO05D007700 3.6e-48 196.1 268 50.0
CARHR250690 Cardamine hirsuta HOM05D002674 ORTHO05D007700 1.3e-45 187.6 280 47.5
AT4G02425 Arabidopsis thaliana HOM05D002674 ORTHO05D007700 2.2e-45 186.8 272 50.0
PSO832G4034 Papaver somniferum HOM05D002674 ORTHO05D007700 2.8e-45 186.4 290 48.6
Carub.0006s3472 Capsella rubella HOM05D002674 ORTHO05D007700 4.9e-45 185.7 273 51.3
Sp6g02330 Schrenkiella parvula HOM05D002674 ORTHO05D007700 4.9e-45 185.7 274 48.5
BcaC03g16124 Brassica carinata HOM05D002674 ORTHO05D007700 3.1e-44 183.0 267 48.3
Thhalv10028893m.g Eutrema salsugineum HOM05D002674 ORTHO05D007700 3.1e-44 183.0 273 48.4
C02p38980 Brassica napus HOM05D002674 ORTHO05D007700 4.1e-44 182.6 269 49.1
BolC2t09909H Brassica oleracea HOM05D002674 ORTHO05D007700 4.1e-44 182.6 269 48.7
A02p24720 Brassica napus HOM05D002674 ORTHO05D007700 7.0e-44 181.8 268 48.5
Oeu054122.1 Olea europaea HOM05D002674 ORTHO05D007700 7.0e-44 181.8 169 62.7
BraA02t07459Z Brassica rapa HOM05D002674 ORTHO05D007700 1.2e-43 181.0 267 48.7
THA.LOC104825970 Tarenaya hassleriana HOM05D002674 ORTHO05D007700 1.2e-43 181.0 279 47.3
vmacro15007 Vaccinium macrocarpon HOM05D002674 ORTHO05D007700 2.7e-43 179.9 250 50.0
Oeu053149.1 Olea europaea HOM05D002674 ORTHO05D007700 3.8e-42 176.0 170 68.2
Aa31LG1G9740 Aethionema arabicum HOM05D002674 ORTHO05D007700 2.1e-40 170.2 278 46.4
arahy.Tifrunner.gnm1.ann1.2P60TQ Arachis hypogaea HOM05D002674 ORTHO05D007700 3.6e-40 169.5 263 45.2
AL6G50650 Arabidopsis lyrata HOM05D002674 ORTHO05D007700 1.5e-38 164.1 234 49.6
ECA247G3124 Erigeron canadensis HOM05D002674 ORTHO05D007700 2.0e-38 163.7 259 45.6
Carub.0001s0195 Capsella rubella HOM05D002674 ORTHO05D007700 5.7e-38 162.2 273 44.3
unitig_22.g5241 Utricularia gibba HOM05D002674 ORTHO05D007700 5.7e-38 162.2 226 50.4
arahy.Tifrunner.gnm1.ann1.YN8C8B Arachis hypogaea HOM05D002674 ORTHO05D007700 4.9e-37 159.1 261 45.2
BcaB05g23628 Brassica carinata HOM05D002674 ORTHO05D007700 2.5e-33 146.7 248 45.2
SEGI_12569 Sequoiadendron giganteum HOM05D002674 ORTHO05D007700 3.6e-32 142.9 342 39.2
AUR62033139 Chenopodium quinoa HOM05D002674 ORTHO05D007700 5.2e-31 139.0 218 50.5
ATR0796G100 Amborella trichopoda HOM05D002674 ORTHO05D007700 8.9e-31 138.3 279 39.8
Aa31LG5G2060 Aethionema arabicum HOM05D002674 ORTHO05D007700 1.5e-30 137.5 253 43.9
Hma1.2p1_0491F.1_g164510 Hydrangea macrophylla HOM05D002674 ORTHO05D007700 5.4e-28 129.0 107 71.0
HPP92_006921 Vanilla planifolia HOM05D002674 ORTHO05D007700 1.7e-26 124.0 233 39.1
AUR62008632 Chenopodium quinoa HOM05D002674 ORTHO05D007700 3.0e-26 123.2 178 53.9
Os01g0316500 Oryza sativa ssp. japonica HOM05D002674 ORTHO05D007700 7.3e-17 92.0 183 40.4
CANSAT56G3445 Cannabis sativa HOM05D002674 ORTHO05D007700 3.4e-14 83.2 95 48.4
Zm00001eb127170 Zea mays HOM05D002674 ORTHO05D007700 2.2e-13 80.5 240 35.0
Zm00001eb285590 Zea mays HOM05D002674 ORTHO05D007700 8.4e-13 78.6 277 32.9
BolC6t36475H Brassica oleracea HOM05D000186 ORTHO05D015008 1.8e-07 60.8 93 40.9
BcaC03g16430 Brassica carinata HOM05D002674 ORTHO05D007700 3.4e-06 56.6 80 41.2


User provided reference genes

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