Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g005730.2 Solanum lycopersicum HOM05D000810 ORTHO05D001064 3.4e-42 174.5 82 100.0
Sopen06g001710 Solanum pennellii HOM05D000810 ORTHO05D001064 3.0e-30 134.8 69 92.8
Sabra10G0155100 Salix brachista HOM05D000810 ORTHO05D001064 5.6e-29 130.6 70 85.7
FAN06G0319 Fragaria x ananassa HOM05D000810 ORTHO05D001064 7.3e-29 130.2 70 84.3
FAN06G1800 Fragaria x ananassa HOM05D000810 ORTHO05D001064 1.3e-28 129.4 70 84.3
Actinidia26730 Actinidia chinensis HOM05D000810 ORTHO05D001064 1.4e-27 125.9 76 76.3
arahy.Tifrunner.gnm1.ann1.M6FCCP Arachis hypogaea HOM05D000810 ORTHO05D001064 9.0e-27 123.2 70 78.6
DCAR_015634 Daucus carota HOM05D000810 ORTHO05D001064 4.5e-26 120.9 77 72.7
Solyc06g005740.3 Solanum lycopersicum HOM05D000810 ORTHO05D001064 5.8e-26 120.6 74 78.4
Nitab4.5_0000004g0070 Nicotiana tabacum HOM05D000810 ORTHO05D001064 1.3e-25 119.4 64 84.4
DCAR_018922 Daucus carota HOM05D000810 ORTHO05D001064 3.8e-25 117.9 70 75.7
MBI13_g31547_MAGBIO Magnolia biondii HOM05D000810 ORTHO05D003737 9.3e-24 113.2 72 70.8
Sopen06g001720 Solanum pennellii HOM05D000002 ORTHO05D000001 2.1e-23 112.1 65 81.5
C05p57820 Brassica napus HOM05D000810 ORTHO05D001064 3.9e-22 107.8 71 67.6
Nitab4.5_0000751g0070 Nicotiana tabacum HOM05D000810 ORTHO05D001064 8.7e-22 106.7 70 68.6
BcaC01g03573 Brassica carinata HOM05D000810 ORTHO05D003737 1.9e-21 105.5 71 66.2
Nitab4.5_0000819g0060 Nicotiana tabacum HOM05D000810 ORTHO05D001064 3.3e-21 104.8 70 67.1
Hund26319 Selenicereus undatus HOM05D000810 ORTHO05D003737 4.3e-21 104.4 77 62.3
MBI10_g27925_MAGBIO Magnolia biondii HOM05D000283 ORTHO05D000358 9.6e-21 103.2 68 67.6
Ah.08g217800 Amaranthus hybridus HOM05D000810 ORTHO05D003737 1.6e-20 102.4 70 67.1
AUR62001335 Chenopodium quinoa HOM05D000810 ORTHO05D003737 2.4e-19 98.6 70 62.9
Haze_21978 Corylus avellana HOM05D000810 ORTHO05D003737 2.4e-19 98.6 70 64.3
Cpa.g.c47951 Carica papaya HOM05D000810 ORTHO05D001064 3.1e-19 98.2 70 64.3
AUR62025670 Chenopodium quinoa HOM05D000810 ORTHO05D003737 3.1e-19 98.2 70 62.9
Oeu000810.1 Olea europaea HOM05D000810 ORTHO05D001064 1.3e-17 92.8 58 75.9
Sabra15G0049700 Salix brachista HOM05D000810 ORTHO05D003737 1.7e-17 92.4 70 60.0
Nn2g11178 Nelumbo nucifera HOM05D000810 ORTHO05D001064 8.4e-17 90.1 70 64.3
Lsat_1_v5_gn_2_112881 Lactuca sativa HOM05D000810 ORTHO05D001064 6.0e-15 84.0 55 70.9
Os05g0327100 Oryza sativa ssp. japonica HOM05D000810 ORTHO05D001064 6.0e-15 84.0 71 52.1
Nitab4.5_0002810g0010 Nicotiana tabacum HOM05D000810 ORTHO05D001064 4.3e-13 77.8 63 63.5
Nitab4.5_0005136g0020 Nicotiana tabacum HOM05D000810 ORTHO05D001064 1.3e-12 76.3 48 75.0
BcaNung06833 Brassica carinata HOM05D000810 ORTHO05D001064 1.8e-11 72.4 51 66.7
Os12g0574400 Oryza sativa ssp. japonica HOM05D000810 ORTHO05D014916 1.8e-11 72.4 69 47.8
Rhsim07G0145800 Rhododendron simsii HOM05D004747 ORTHO05D001064 3.1e-11 71.6 63 58.7
Cpa.g.sc95.30 Carica papaya HOM05D000810 ORTHO05D001064 4.0e-11 71.2 49 67.3
Atru.chr1.2646 Acer truncatum HOM05D000810 ORTHO05D003737 5.3e-11 70.9 74 51.4
Aqoxy2G02074 Aquilegia oxysepala HOM05D000042 ORTHO05D001064 3.8e-09 64.7 44 61.4
Sc11g0007830 Simmondsia chinensis HOM05D000810 ORTHO05D001064 2.7e-07 58.5 32 78.1
Sed0024049 Sechium edule HOM05D000810 ORTHO05D001064 1.0e-06 56.6 29 86.2
TPR.G5638 Trifolium pratense HOM05D000810 ORTHO05D001064 1.0e-06 56.6 32 75.0
CSS0020268 Camellia sinensis var. sinensis HOM05D000810 ORTHO05D001064 2.3e-06 55.5 29 82.8
CSS0043240 Camellia sinensis var. sinensis HOM05D000810 ORTHO05D001064 2.3e-06 55.5 29 82.8
Cre07.g328250 Chlamydomonas reinhardtii HOM05D000810 ORTHO05D003737 3.0e-06 55.1 57 42.1
HanXRQChr08g0221001 Helianthus annuus HOM05D000810 ORTHO05D001064 3.9e-06 54.7 30 76.7
Medtr2g097670 Medicago truncatula HOM05D000810 ORTHO05D001064 5.1e-06 54.3 29 79.3
HanXRQChr08g0221131 Helianthus annuus HOM05D000810 ORTHO05D001064 6.7e-06 53.9 29 79.3
Sabra09G0024900 Salix brachista HOM05D000810 ORTHO05D001064 6.7e-06 53.9 30 80.0
ECA236G0109 Erigeron canadensis HOM05D000810 ORTHO05D001064 8.7e-06 53.5 29 75.9
Migut.F00760 Erythranthe guttata HOM05D000810 ORTHO05D001064 8.7e-06 53.5 30 80.0
MD03G1087000 Malus domestica HOM05D000810 ORTHO05D001064 8.7e-06 53.5 29 79.3


User provided reference genes

Program Settings