Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g005660.3 Solanum lycopersicum HOM05D014857 ORTHO05D015078 0.0e+00 1096.6 581 100.0
Sopen06g001640 Solanum pennellii HOM05D014857 ORTHO05D015078 8.8e-302 1039.6 581 95.5
PGSC0003DMG400002154 Solanum tuberosum HOM05D014857 ORTHO05D015078 2.7e-226 788.9 583 77.9
Peaxi162Scf00122g00211 Petunia axillaris HOM05D014857 ORTHO05D015078 2.1e-125 453.8 629 52.0
Nitab4.5_0000880g0010 Nicotiana tabacum HOM05D014857 ORTHO05D015078 5.1e-76 289.7 595 40.8
Nitab4.5_0000272g0020 Nicotiana tabacum HOM05D014857 ORTHO05D015078 1.0e-44 185.7 653 32.0
DCAR_015272 Daucus carota HOM05D003265 ORTHO05D015078 3.3e-30 137.5 688 28.9
Dinv04678 Davidia involucrata HOM05D003265 ORTHO05D003819 2.6e-27 127.9 728 28.6
vmacro07090 Vaccinium macrocarpon HOM05D003265 ORTHO05D003819 1.2e-24 119.0 689 26.4
CSS0002755 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 4.6e-24 117.1 737 27.5
Lj1A924T53 Lonicera japonica HOM05D003265 ORTHO05D003819 4.7e-21 107.1 643 28.1
Actinidia38248 Actinidia chinensis HOM05D003265 ORTHO05D003819 6.2e-21 106.7 738 25.6
Cc09_g02720 Coffea canephora HOM05D014857 ORTHO05D015078 6.8e-20 103.2 569 28.5
Lsat_1_v5_gn_9_68001 Lactuca sativa HOM05D014857 ORTHO05D015078 4.1e-17 94.0 493 28.2
HanXRQChr09g0246531 Helianthus annuus HOM05D014857 ORTHO05D015078 5.4e-17 93.6 462 28.1
CSS0013290 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 3.3e-14 84.3 680 25.9
Nn2g10657 Nelumbo nucifera HOM05D003265 ORTHO05D003819 4.7e-13 80.5 142 43.7
CSS0006813 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 1.5e-11 75.5 701 26.0
CSS0011554 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 9.9e-11 72.8 100 46.0
COL.COLO4_27082 Corchorus olitorius HOM05D003265 ORTHO05D003819 1.3e-10 72.4 143 40.6
CSS0047156 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 1.7e-10 72.0 108 41.7
Sed0024874 Sechium edule HOM05D003265 ORTHO05D003819 4.9e-10 70.5 431 27.6
QL07p045275 Quercus lobata HOM05D003265 ORTHO05D003819 2.4e-09 68.2 154 35.1
arahy.Tifrunner.gnm1.ann1.1ZS95I Arachis hypogaea HOM05D003265 ORTHO05D003819 4.1e-09 67.4 133 36.8
CSS0028328 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 7.1e-09 66.6 394 28.2
CsaV3_3G035550 Cucumis sativus L. HOM05D003265 ORTHO05D003819 7.1e-09 66.6 453 26.3
Thecc.05G053900 Theobroma cacao HOM05D003265 ORTHO05D003819 2.1e-08 65.1 140 37.9
arahy.Tifrunner.gnm1.ann1.H355B7 Arachis hypogaea HOM05D003265 ORTHO05D003819 4.6e-08 63.9 211 29.4
CSS0009096 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 4.6e-08 63.9 103 41.7
Dinv35709 Davidia involucrata HOM05D003265 ORTHO05D003819 4.6e-08 63.9 136 38.2
MELO3C009314.2 Cucumis melo HOM05D003265 ORTHO05D003819 6.0e-08 63.5 479 25.5
Cc06_g03550 Coffea canephora HOM05D003265 ORTHO05D003819 1.0e-07 62.8 191 33.0
Sc20g0002100 Simmondsia chinensis HOM05D030307 ORTHO05D026528 1.0e-07 62.8 436 25.9
Nn2g12994 Nelumbo nucifera HOM05D003265 ORTHO05D003819 1.3e-07 62.4 719 25.9
Rhsim03G0122700 Rhododendron simsii HOM05D003265 ORTHO05D003819 1.7e-07 62.0 664 23.5
Sp5g09010 Schrenkiella parvula HOM05D003265 ORTHO05D003819 1.7e-07 62.0 145 39.3
Phvul.001G174800 Phaseolus vulgaris HOM05D003265 ORTHO05D003819 2.3e-07 61.6 134 35.1
Gohir.A01G217200 Gossypium hirsutum HOM05D003265 ORTHO05D003819 3.0e-07 61.2 134 37.3
Gorai.002G250300 Gossypium raimondii HOM05D003265 ORTHO05D003819 3.0e-07 61.2 140 36.4
GSVIVG01016342001 Vitis vinifera HOM05D003265 ORTHO05D003819 3.0e-07 61.2 686 23.6
Gohir.D01G205900 Gossypium hirsutum HOM05D003265 ORTHO05D003819 3.9e-07 60.8 134 37.3
Thhalv10010259m.g Eutrema salsugineum HOM05D003265 ORTHO05D003819 5.1e-07 60.5 144 34.7
Actinidia05272 Actinidia chinensis HOM05D003265 ORTHO05D003819 6.6e-07 60.1 129 34.9
Manes.08G003400 Manihot esculenta HOM05D003265 ORTHO05D003819 6.6e-07 60.1 157 35.0
TWI74G1096 Tripterygium wilfordii HOM05D003265 ORTHO05D003819 8.6e-07 59.7 155 33.5
Sp4g19390 Schrenkiella parvula HOM05D003265 ORTHO05D003819 1.1e-06 59.3 143 37.8
SGA_v2.0_scaffold94G28667 Striga asiatica HOM05D003265 ORTHO05D003819 1.1e-06 59.3 131 31.3
Oeu026065.2 Olea europaea HOM05D003265 ORTHO05D003819 1.5e-06 58.9 60 53.3
Duzib128G1251 Durio zibethinus HOM05D003265 ORTHO05D003819 1.9e-06 58.5 137 35.0
Oeu035141.2 Olea europaea HOM05D003265 ORTHO05D003819 1.9e-06 58.5 60 51.7
SHI12573 Sapria himalayana HOM05D003265 ORTHO05D003819 1.9e-06 58.5 136 34.6
THA.LOC104806495 Tarenaya hassleriana HOM05D003265 ORTHO05D003819 2.5e-06 58.2 143 38.5
GSVIVG01025624001 Vitis vinifera HOM05D000855 ORTHO05D002321 2.5e-06 58.2 60 56.7
Potri.006G131650 Populus trichocarpa HOM05D003265 ORTHO05D003819 4.3e-06 57.4 219 29.7
Dinv37252 Davidia involucrata HOM05D003265 ORTHO05D003819 5.6e-06 57.0 45 62.2
Potri.016G085600 Populus trichocarpa HOM05D003265 ORTHO05D003819 7.3e-06 56.6 145 34.5
Psat6g070560 Pisum sativum HOM05D003265 ORTHO05D003819 9.6e-06 56.2 142 32.4
TWI79G0725 Tripterygium wilfordii HOM05D006507 ORTHO05D007296 9.6e-06 56.2 358 26.0


User provided reference genes

Program Settings