Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g005380.3 Solanum lycopersicum HOM05D007176 ORTHO05D009050 1.5e-115 420.2 347 100.0
Sopen06g001340 Solanum pennellii HOM05D007176 ORTHO05D009050 4.1e-113 412.1 347 90.2
PGSC0003DMG400029168 Solanum tuberosum HOM05D007176 ORTHO05D009050 1.0e-111 407.5 347 97.1
CAN.G111.5 Capsicum annuum HOM05D007176 ORTHO05D009050 1.3e-106 390.6 346 94.8
Peaxi162Scf00258g00925 Petunia axillaris HOM05D007176 ORTHO05D009050 1.3e-95 354.0 342 88.9
Migut.K00028 Erythranthe guttata HOM05D007176 ORTHO05D009050 1.7e-82 310.5 347 72.0
QL07p025011 Quercus lobata HOM05D007176 ORTHO05D009050 8.3e-82 308.1 344 73.0
Dinv16365 Davidia involucrata HOM05D007176 ORTHO05D009050 5.4e-81 305.4 344 62.5
FvH4_6g21620 Fragaria vesca HOM05D007176 ORTHO05D009050 9.2e-81 304.7 347 70.3
FAN14G2546 Fragaria x ananassa HOM05D007176 ORTHO05D009050 1.2e-80 304.3 347 70.6
Duzib106G0399 Durio zibethinus HOM05D007176 ORTHO05D009050 1.6e-80 303.9 343 62.1
Thecc.05G178200 Theobroma cacao HOM05D007176 ORTHO05D009050 1.6e-80 303.9 343 60.3
Nitab4.5_0008255g0020 Nicotiana tabacum HOM05D007176 ORTHO05D009050 4.6e-80 302.4 343 61.2
FAN02G0922 Fragaria x ananassa HOM05D007176 ORTHO05D009050 7.8e-80 301.6 347 70.0
TAR633G1141 Trochodendron aralioides HOM05D007176 ORTHO05D009050 1.0e-79 301.2 344 72.7
Manes.09G039600 Manihot esculenta HOM05D007176 ORTHO05D009050 1.3e-79 300.8 341 70.1
FAN09G2372 Fragaria x ananassa HOM05D007176 ORTHO05D009050 2.3e-79 300.1 347 69.5
TAR633G0683 Trochodendron aralioides HOM05D007176 ORTHO05D009050 3.9e-79 299.3 344 72.4
CiPaw.09G027300 Carya illinoinensis HOM05D007176 ORTHO05D009050 6.6e-79 298.5 345 72.5
RcHm_v2.0_Chr3g0478871 Rosa chinensis HOM05D007176 ORTHO05D009050 6.6e-79 298.5 344 61.9
Cfa020128 Carpinus fangiana HOM05D007176 ORTHO05D009050 5.6e-78 295.4 345 49.9
Nn2g15783 Nelumbo nucifera HOM05D007176 ORTHO05D009050 3.6e-77 292.7 341 66.6
Gohir.A04G053500 Gossypium hirsutum HOM05D007176 ORTHO05D009050 6.2e-77 292.0 343 62.7
Lju124C23T17 Lonicera japonica HOM05D007176 ORTHO05D009050 1.8e-76 290.4 332 73.5
Rhsim04G0094400 Rhododendron simsii HOM05D007176 ORTHO05D009050 1.8e-76 290.4 342 77.5
Hma1.2p1_0645F.1_g194890 Hydrangea macrophylla HOM05D007176 ORTHO05D009050 4.0e-76 289.3 344 70.9
Eucgr.K01865 Eucalyptus grandis HOM05D007176 ORTHO05D009050 1.2e-75 287.7 344 70.1
FAN05G5781 Fragaria x ananassa HOM05D007176 ORTHO05D009050 1.2e-75 287.7 353 68.3
CSS0044198 Camellia sinensis var. sinensis HOM05D007176 ORTHO05D009050 1.5e-75 287.3 344 78.2
Cc06_g15630 Coffea canephora HOM05D007176 ORTHO05D009050 2.6e-75 286.6 346 78.9
EL10Ac3g06857 Beta vulgaris HOM05D007176 ORTHO05D009050 3.7e-74 282.7 341 67.4
BcaC07g40246 Brassica carinata HOM05D007176 ORTHO05D009050 3.2e-73 279.6 344 60.2
HanXRQChr10g0300591 Helianthus annuus HOM05D007176 ORTHO05D009050 5.4e-73 278.9 347 68.3
Prupe.7G084400 Prunus persica HOM05D007176 ORTHO05D009050 3.5e-72 276.2 346 69.1
COL.COLO4_29390 Corchorus olitorius HOM05D007176 ORTHO05D009050 1.3e-71 274.2 320 70.6
ECA247G1245 Erigeron canadensis HOM05D007176 ORTHO05D009050 1.7e-71 273.9 344 68.3
Aa31LG10G13110 Aethionema arabicum HOM05D007176 ORTHO05D009050 1.9e-70 270.4 344 58.4
Haze_20048 Corylus avellana HOM05D007176 ORTHO05D009050 3.3e-70 269.6 377 52.3
Haze_20055 Corylus avellana HOM05D007176 ORTHO05D009050 3.3e-70 269.6 377 52.3
A09p51090 Brassica napus HOM05D007176 ORTHO05D009050 1.2e-69 267.7 368 56.0
Potri.006G195800 Populus trichocarpa HOM05D007176 ORTHO05D009050 4.7e-69 265.8 343 68.5
SalBow1G6257 Salvia bowleyana HOM05D007176 ORTHO05D009050 1.8e-68 263.8 353 67.1
Actinidia17284 Actinidia chinensis HOM05D007176 ORTHO05D009050 4.0e-68 262.7 344 67.7
Cpa.g.sc85.35 Carica papaya HOM05D007176 ORTHO05D009050 2.6e-67 260.0 347 67.7
Sabra06G0150500 Salix brachista HOM05D007176 ORTHO05D009050 4.4e-67 259.2 343 67.6
CSS0035640 Camellia sinensis var. sinensis HOM05D007176 ORTHO05D009050 5.8e-67 258.8 344 73.8
C08p33910 Brassica napus HOM05D007176 ORTHO05D009050 1.7e-66 257.3 344 57.6
THA.LOC104802720 Tarenaya hassleriana HOM05D007176 ORTHO05D009050 1.7e-66 257.3 345 54.8
arahy.Tifrunner.gnm1.ann1.5B5G66 Arachis hypogaea HOM05D007176 ORTHO05D009050 8.4e-66 255.0 351 63.8
GSVIVG01033441001 Vitis vinifera HOM05D007176 ORTHO05D009050 1.1e-65 254.6 319 64.9
Lj5g0009846 Lotus japonicus HOM05D007176 ORTHO05D009050 1.4e-65 254.2 344 65.1
Os02g0281150 Oryza sativa ssp. japonica HOM05D007176 ORTHO05D009050 4.2e-65 252.7 346 65.3
CANSAT64G0938 Cannabis sativa HOM05D007176 ORTHO05D009050 9.3e-65 251.5 343 64.7
vmacro22113 Vaccinium macrocarpon HOM05D007176 ORTHO05D009050 9.3e-65 251.5 370 47.3
Sc13g0002490 Simmondsia chinensis HOM05D007176 ORTHO05D009050 2.1e-64 250.4 345 56.2
MD12G1053200 Malus domestica HOM05D007176 ORTHO05D009050 3.5e-64 249.6 344 65.7
MD14G1051600 Malus domestica HOM05D007176 ORTHO05D009050 3.5e-64 249.6 344 57.3
Nitab4.5_0000009g0020 Nicotiana tabacum HOM05D007176 ORTHO05D009050 1.9e-62 243.8 413 48.2
Lalb_Chr02g0153821 Lupinus albus HOM05D007176 ORTHO05D009050 2.5e-62 243.4 348 73.9
arahy.Tifrunner.gnm1.ann1.I5CDLA Arachis hypogaea HOM05D007176 ORTHO05D009050 5.6e-62 242.3 364 61.0
AL5G40300 Arabidopsis lyrata HOM05D007176 ORTHO05D009050 2.4e-60 236.9 344 61.6
MBI01_g44281_MAGBIO Magnolia biondii HOM05D007176 ORTHO05D009050 3.1e-60 236.5 331 44.4
TPR.G19346 Trifolium pratense HOM05D007176 ORTHO05D009050 4.0e-60 236.1 378 61.4
Thhalv10006065m.g Eutrema salsugineum HOM05D007176 ORTHO05D009050 1.2e-59 234.6 344 61.6
Lsat_1_v5_gn_9_26900 Lactuca sativa HOM05D007176 ORTHO05D009050 1.5e-59 234.2 346 57.2
CARHR168930 Cardamine hirsuta HOM05D007176 ORTHO05D009050 2.0e-59 233.8 344 53.8
PGR142G3952 Punica granatum HOM05D007176 ORTHO05D009050 7.6e-59 231.9 344 61.6
Zm00001eb237210 Zea mays HOM05D007176 ORTHO05D009050 1.7e-58 230.7 346 70.8
Aqoxy279s002 Aquilegia oxysepala HOM05D007176 ORTHO05D009050 1.9e-57 227.3 343 71.4
Aqoxy2G00051 Aquilegia oxysepala HOM05D007176 ORTHO05D009050 1.9e-57 227.3 343 71.4
Carub.0005s2528 Capsella rubella HOM05D007176 ORTHO05D009050 1.9e-57 227.3 344 61.0
Atru.BG.213.p Acer truncatum HOM05D007176 ORTHO05D009050 4.2e-57 226.1 342 64.0
Sp5g04340 Schrenkiella parvula HOM05D007176 ORTHO05D009050 1.6e-56 224.2 344 50.6
AT3G58530 Arabidopsis thaliana HOM05D007176 ORTHO05D009050 1.0e-55 221.5 344 59.6
CDE04G3485 Ceratophyllum demersum HOM05D007176 ORTHO05D009050 3.0e-55 219.9 341 60.7
SGA_v2.0_scaffold274G46490 Striga asiatica HOM05D007176 ORTHO05D009050 1.9e-54 217.2 136 78.7
Medtr1g054625 Medicago truncatula HOM05D007176 ORTHO05D009050 6.9e-52 208.8 344 61.6
AUR62032747 Chenopodium quinoa HOM05D007176 ORTHO05D009050 2.9e-50 203.4 319 61.1
DCAR_019856 Daucus carota HOM05D007176 ORTHO05D009050 4.9e-50 202.6 326 39.0
Glyma.09G105500 Glycine max HOM05D007176 ORTHO05D009050 1.4e-49 201.1 348 60.3
BolC8t50987H Brassica oleracea HOM05D000032 ORTHO05D001620 2.4e-49 200.3 277 60.3
Gohir.D04G094700 Gossypium hirsutum HOM05D007176 ORTHO05D009050 7.1e-49 198.7 277 61.0
Hma1.2p1_0645F.1_g194900 Hydrangea macrophylla HOM05D007176 ORTHO05D009050 1.6e-48 197.6 286 69.6
Ca_03573_v3 Cicer arietinum L. HOM05D007176 ORTHO05D009050 6.0e-48 195.7 350 59.4
unitig_736.g22301 Utricularia gibba HOM05D007176 ORTHO05D009050 8.7e-47 191.8 394 62.2
Ah.13g075580 Amaranthus hybridus HOM05D007176 ORTHO05D009050 1.1e-46 191.4 283 65.7
PSO541G4948 Papaver somniferum HOM05D007176 ORTHO05D009050 1.1e-46 191.4 141 66.0
Ciclev10012430m.g Citrus clementina HOM05D007176 ORTHO05D009050 5.6e-46 189.1 139 65.5
Gorai.009G392400 Gossypium raimondii HOM05D007176 ORTHO05D009050 9.6e-46 188.3 310 57.4
VMungo0720G0788 Vigna mungo HOM05D007176 ORTHO05D009050 1.9e-41 174.1 141 61.7
Phvul.007G261900 Phaseolus vulgaris HOM05D007176 ORTHO05D009050 2.1e-40 170.6 141 61.0
HPP92_010126 Vanilla planifolia HOM05D007176 ORTHO05D009050 6.0e-40 169.1 136 60.3
PSO675G7508 Papaver somniferum HOM05D007176 ORTHO05D009050 1.0e-39 168.3 141 59.6
BraA09t40553Z Brassica rapa HOM05D000032 ORTHO05D001620 2.5e-38 163.7 278 54.3
Psat6g088000 Pisum sativum HOM05D007176 ORTHO05D009050 6.2e-37 159.1 297 70.7
BcaC02g10014 Brassica carinata HOM05D007176 ORTHO05D009050 1.4e-36 157.9 296 58.8
AagrBONN_evm.TU.Sc2ySwM_228.1251 Anthoceros agrestis HOM05D007176 ORTHO05D009050 2.4e-36 157.1 344 58.7
SMO118G0524 Selaginella moellendorffii HOM05D007176 ORTHO05D009050 1.5e-35 154.5 340 48.5
Atru.chr8.1185 Acer truncatum HOM05D007176 ORTHO05D009050 2.5e-33 147.1 138 55.8
SEGI_09769 Sequoiadendron giganteum HOM05D007176 ORTHO05D009050 7.1e-33 145.6 289 59.9
BolC4t24963H Brassica oleracea HOM05D000032 ORTHO05D001620 3.0e-31 140.2 300 57.0
arahy.Tifrunner.gnm1.ann1.0S64XP Arachis hypogaea HOM05D007176 ORTHO05D009050 3.9e-31 139.8 276 54.7
C04p33960 Brassica napus HOM05D007176 ORTHO05D009050 5.1e-31 139.4 300 57.3
Pp3c23_2930 Physcomitrium patens HOM05D007176 ORTHO05D009050 3.3e-30 136.7 341 46.6
ATR0001G043 Amborella trichopoda HOM05D007176 ORTHO05D009050 2.5e-25 120.6 86 65.1
Hund24819 Selenicereus undatus HOM05D007176 ORTHO05D001610 3.9e-23 113.2 121 76.0
Hund24823 Selenicereus undatus HOM05D007176 ORTHO05D009050 6.5e-18 95.9 115 47.0
HanXRQChr05g0140621 Helianthus annuus HOM05D007176 ORTHO05D009050 4.2e-17 93.2 77 62.3
HanXRQChr10g0316231 Helianthus annuus HOM05D007176 ORTHO05D009050 4.2e-17 93.2 77 62.3
A04p02540 Brassica napus HOM05D000032 ORTHO05D001620 1.1e-12 78.6 293 31.7
PRCOL_00005880 Prasinoderma coloniale HOM05D007176 ORTHO05D009050 6.7e-07 59.3 271 21.8
Mapoly0209s0007 Marchantia polymorpha HOM05D007176 ORTHO05D009050 8.8e-07 58.9 125 30.4


User provided reference genes

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