Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g005100.3 Solanum lycopersicum HOM05D007819 ORTHO05D009848 2.5e-115 418.7 197 100.0
Sopen06g001100 Solanum pennellii HOM05D007819 ORTHO05D009848 8.3e-111 403.7 197 95.9
Nitab4.5_0007369g0010 Nicotiana tabacum HOM05D007819 ORTHO05D009848 3.2e-94 348.6 232 74.1
CAN.G1171.1 Capsicum annuum HOM05D007819 ORTHO05D009848 1.6e-93 346.3 184 88.6
Nitab4.5_0000888g0180 Nicotiana tabacum HOM05D007819 ORTHO05D009848 6.4e-87 324.3 220 69.5
Cc01_g11630 Coffea canephora HOM05D007819 ORTHO05D009848 7.3e-83 310.8 180 75.6
Peaxi162Scf00389g00619 Petunia axillaris HOM05D007819 ORTHO05D009848 4.7e-82 308.1 184 78.3
Oeu017391.1 Olea europaea HOM05D007819 ORTHO05D009848 3.1e-81 305.4 180 73.3
Manes.04G025500 Manihot esculenta HOM05D007819 ORTHO05D009848 3.4e-80 302.0 193 68.4
Nn2g10668 Nelumbo nucifera HOM05D007819 ORTHO05D009848 2.9e-79 298.9 196 67.9
Migut.N02626 Erythranthe guttata HOM05D007819 ORTHO05D009848 3.2e-78 295.4 187 69.5
Thecc.09G261200 Theobroma cacao HOM05D007819 ORTHO05D009848 7.8e-77 290.8 175 71.4
PSO384G2242 Papaver somniferum HOM05D007819 ORTHO05D009848 1.3e-76 290.0 179 70.4
COL.COLO4_25254 Corchorus olitorius HOM05D007819 ORTHO05D009848 1.7e-76 289.7 175 70.9
PSO339G1273 Papaver somniferum HOM05D007819 ORTHO05D009848 2.3e-76 289.3 179 70.4
Atru.chr3.3713 Acer truncatum HOM05D007819 ORTHO05D009848 3.9e-76 288.5 185 66.5
Cpa.g.sc318.6 Carica papaya HOM05D007819 ORTHO05D009848 6.6e-76 287.7 172 72.7
Gorai.006G121000 Gossypium raimondii HOM05D007819 ORTHO05D009848 1.9e-75 286.2 175 69.7
Lsat_1_v5_gn_2_25861 Lactuca sativa HOM05D007819 ORTHO05D009848 2.5e-75 285.8 164 75.6
Duzib168G1088 Durio zibethinus HOM05D007819 ORTHO05D009848 5.6e-75 284.6 190 66.3
RcHm_v2.0_Chr5g0060991 Rosa chinensis HOM05D007819 ORTHO05D009848 5.6e-75 284.6 175 71.4
Gohir.A09G105900 Gossypium hirsutum HOM05D007819 ORTHO05D009848 7.3e-75 284.3 174 69.5
Prupe.6G093600 Prunus persica HOM05D007819 ORTHO05D009848 2.1e-74 282.7 180 69.4
TAR623G0280 Trochodendron aralioides HOM05D007819 ORTHO05D009848 2.1e-74 282.7 174 70.1
PGR102G1079 Punica granatum HOM05D007819 ORTHO05D009848 1.1e-73 280.4 163 73.0
FAN21G3467 Fragaria x ananassa HOM05D007819 ORTHO05D009848 1.8e-73 279.6 181 68.0
TWI75G0698 Tripterygium wilfordii HOM05D007819 ORTHO05D009848 1.8e-73 279.6 207 61.4
CANSAT54G2163 Cannabis sativa HOM05D007819 ORTHO05D009848 4.0e-73 278.5 176 69.9
Gohir.D05G077600 Gossypium hirsutum HOM05D007819 ORTHO05D009848 6.8e-73 277.7 175 67.4
Gorai.009G079100 Gossypium raimondii HOM05D007819 ORTHO05D009848 6.8e-73 277.7 175 67.4
CiPaw.13G106200 Carya illinoinensis HOM05D007819 ORTHO05D009848 8.9e-73 277.3 169 69.8
Dinv32800 Davidia involucrata HOM05D007819 ORTHO05D009848 8.9e-73 277.3 187 68.4
Gohir.A05G074800 Gossypium hirsutum HOM05D007819 ORTHO05D009848 1.5e-72 276.6 175 67.4
Gohir.D09G102600 Gossypium hirsutum HOM05D007819 ORTHO05D009848 2.6e-72 275.8 165 70.9
Eucgr.B02464 Eucalyptus grandis HOM05D007819 ORTHO05D009848 5.8e-72 274.6 163 71.2
FAN25G2530 Fragaria x ananassa HOM05D007819 ORTHO05D009848 7.6e-72 274.2 165 70.9
MD11G1124900 Malus domestica HOM05D007819 ORTHO05D009848 9.9e-72 273.9 180 66.7
Gohir.A05G074866 Gossypium hirsutum HOM05D007819 ORTHO05D009848 2.2e-71 272.7 175 66.9
DCAR_005475 Daucus carota HOM05D007819 ORTHO05D009848 1.1e-70 270.4 163 72.4
MD03G1111000 Malus domestica HOM05D007819 ORTHO05D009848 1.9e-70 269.6 180 65.0
CiPaw.14G077600 Carya illinoinensis HOM05D007819 ORTHO05D009848 7.1e-70 267.7 195 62.6
Hma1.2p1_2033F.1_g311900 Hydrangea macrophylla HOM05D007819 ORTHO05D009848 1.6e-69 266.5 165 70.9
QL01p036876 Quercus lobata HOM05D007819 ORTHO05D009848 4.6e-69 265.0 182 64.3
Ciclev10029813m.g Citrus clementina HOM05D007819 ORTHO05D009848 1.1e-67 260.4 159 71.1
CiPaw.13G106300 Carya illinoinensis HOM05D007819 ORTHO05D009848 1.9e-67 259.6 193 60.1
GSVIVG01025124001 Vitis vinifera HOM05D007819 ORTHO05D009848 1.9e-67 259.6 174 67.8
MSTRG.12613 Avicennia marina HOM05D007819 ORTHO05D009848 1.3e-66 256.9 177 65.0
CiPaw.14G077700 Carya illinoinensis HOM05D007819 ORTHO05D009848 1.1e-65 253.8 164 64.6
unitig_699.g19198 Utricularia gibba HOM05D007819 ORTHO05D009848 5.8e-64 248.1 182 59.9
FAN16G1444 Fragaria x ananassa HOM05D007819 ORTHO05D009848 8.4e-63 244.2 163 66.9
AUR62006507 Chenopodium quinoa HOM05D007819 ORTHO05D009848 4.2e-62 241.9 200 57.5
Nitab4.5_0000022g0250 Nicotiana tabacum HOM05D007819 ORTHO05D009848 8.7e-60 234.2 185 65.4
Nitab4.5_0001578g0010 Nicotiana tabacum HOM05D007819 ORTHO05D009848 1.8e-57 226.5 224 52.2
Lj1A183T52 Lonicera japonica HOM05D007819 ORTHO05D009848 2.4e-57 226.1 173 61.8
HPP92_025075 Vanilla planifolia HOM05D007819 ORTHO05D009848 1.3e-55 220.3 172 55.8
Mapoly0103s0031 Marchantia polymorpha HOM05D007819 ORTHO05D009848 1.4e-54 216.9 172 58.1
Zm00001eb013150 Zea mays HOM05D007819 ORTHO05D009848 3.2e-54 215.7 172 56.4
FvH4_3g33520 Fragaria vesca HOM05D007819 ORTHO05D009848 2.7e-53 212.6 128 71.1
Migut.O00707 Erythranthe guttata HOM05D007819 ORTHO05D009848 1.9e-51 206.5 133 67.7
SGA_v2.0_scaffold2G00920 Striga asiatica HOM05D007819 ORTHO05D009848 1.3e-50 203.8 189 50.8
Sc21g0003720 Simmondsia chinensis HOM05D007819 ORTHO05D009848 8.1e-50 201.1 136 65.4
PGSC0003DMG401025397 Solanum tuberosum HOM05D007819 ORTHO05D009848 3.1e-49 199.1 97 93.8
Haze_23935 Corylus avellana HOM05D007819 ORTHO05D009848 1.0e-47 194.1 133 65.4
AagrBONN_evm.TU.Sc2ySwM_344.1297 Anthoceros agrestis HOM05D007819 ORTHO05D009848 4.6e-45 185.3 180 50.0
Pp3c9_23950 Physcomitrium patens HOM05D007819 ORTHO05D009848 1.0e-44 184.1 201 45.8
EL10Ac9g22426 Beta vulgaris HOM05D007819 ORTHO05D009848 1.3e-44 183.7 136 63.2
Pp3c15_22830 Physcomitrium patens HOM05D007819 ORTHO05D009848 3.9e-44 182.2 197 46.7
Mapoly0155s0016 Marchantia polymorpha HOM05D007819 ORTHO05D009848 2.5e-43 179.5 169 48.5
AagrBONN_evm.TU.Sc2ySwM_344.3840 Anthoceros agrestis HOM05D007819 ORTHO05D009848 4.3e-43 178.7 169 48.5
Mapoly0035s0019 Marchantia polymorpha HOM05D007819 ORTHO05D009848 6.2e-42 174.9 169 48.5
Pp3c21_1570 Physcomitrium patens HOM05D007819 ORTHO05D009848 6.2e-42 174.9 174 45.4
Mapoly0008s0213 Marchantia polymorpha HOM05D007819 ORTHO05D009848 3.4e-40 169.1 169 46.7
QL01p036758 Quercus lobata HOM05D007819 ORTHO05D009848 1.1e-35 154.1 93 73.1
Mapoly0088s0067 Marchantia polymorpha HOM05D000370 ORTHO05D001335 1.1e-33 147.5 178 39.9
Pp3c3_24540 Physcomitrium patens HOM05D007819 ORTHO05D009848 2.2e-31 139.8 155 41.9
Pp3c12_18930 Physcomitrium patens HOM05D000370 ORTHO05D009848 2.9e-31 139.4 175 37.1
Pp3c12_18938 Physcomitrium patens HOM05D000370 ORTHO05D009848 2.9e-31 139.4 175 37.1
Oeu012676.1 Olea europaea HOM05D007819 ORTHO05D009848 6.1e-29 131.7 73 79.5
AUR62025022 Chenopodium quinoa HOM05D007819 ORTHO05D009848 1.0e-23 114.4 143 44.8


User provided reference genes

Program Settings