Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g150147.1 Solanum lycopersicum HOM05D000017 ORTHO05D009364 5.3e-82 308.1 219 100.0
Sopen03g017650 Solanum pennellii HOM05D000017 ORTHO05D000013 3.3e-76 288.9 217 89.9
Sopen04g018010 Solanum pennellii HOM05D000017 ORTHO05D001349 1.2e-73 280.4 217 94.9
Sopen11g009200 Solanum pennellii HOM05D000004 ORTHO05D000002 2.9e-72 275.8 217 94.5
Sopen05g030950 Solanum pennellii HOM05D000017 ORTHO05D000013 1.1e-71 273.9 217 94.0
Sopen09g008710 Solanum pennellii HOM05D000006 ORTHO05D000001 1.3e-56 223.8 217 82.0
Sopen11g011500 Solanum pennellii HOM05D000017 ORTHO05D018899 3.1e-42 176.0 200 62.0
Sopen10g011920 Solanum pennellii HOM05D000017 ORTHO05D001349 1.0e-40 171.0 163 85.3
Sopen12g009320 Solanum pennellii HOM05D000002 ORTHO05D000001 3.3e-36 156.0 163 90.2
Solyc05g047645.1 Solanum lycopersicum HOM05D000017 ORTHO05D009364 4.5e-25 119.0 59 96.6
Solyc12g042680.1 Solanum lycopersicum HOM05D000017 ORTHO05D000002 8.5e-24 114.8 92 85.9
Peaxi162Scf00081g01815 Petunia axillaris HOM05D000017 ORTHO05D009364 1.5e-23 114.0 262 44.3
Nitab4.5_0009037g0040 Nicotiana tabacum HOM05D000017 ORTHO05D009364 9.8e-20 101.3 223 35.4
Sopen01g006400 Solanum pennellii HOM05D000017 ORTHO05D000013 1.4e-18 97.4 239 33.9
Sopen03g028620 Solanum pennellii HOM05D001851 ORTHO05D013101 1.4e-18 97.4 239 33.9
Sopen06g014550 Solanum pennellii HOM05D000017 ORTHO05D001349 2.2e-16 90.1 271 36.2
Sopen07g012470 Solanum pennellii HOM05D000017 ORTHO05D000013 2.2e-16 90.1 271 36.2
Sopen09g030880 Solanum pennellii HOM05D000017 ORTHO05D000013 2.2e-16 90.1 271 36.2
Sopen05g029250 Solanum pennellii HOM05D000017 ORTHO05D001349 6.5e-16 88.6 275 35.6
Sopen10g031980 Solanum pennellii HOM05D000017 ORTHO05D000013 6.5e-16 88.6 275 35.6
Sopen02g011340 Solanum pennellii HOM05D000017 ORTHO05D000013 1.9e-15 87.0 275 35.3
Sopen03g025320 Solanum pennellii HOM05D000017 ORTHO05D000013 1.9e-15 87.0 275 35.3
Sopen06g004260 Solanum pennellii HOM05D000017 ORTHO05D000013 1.9e-15 87.0 275 35.3
Peaxi162Scf00070g00021 Petunia axillaris HOM05D000017 ORTHO05D001349 3.2e-15 86.3 58 70.7
Peaxi162Scf00099g01612 Petunia axillaris HOM05D000017 ORTHO05D001349 3.2e-15 86.3 58 70.7
Peaxi162Scf00100g00018 Petunia axillaris HOM05D000017 ORTHO05D001349 3.2e-15 86.3 58 70.7
Peaxi162Scf00578g00027 Petunia axillaris HOM05D000017 ORTHO05D001349 3.2e-15 86.3 58 70.7
Peaxi162Scf00594g00014 Petunia axillaris HOM05D000017 ORTHO05D001349 3.2e-15 86.3 58 70.7
Sopen12g014770 Solanum pennellii HOM05D000017 ORTHO05D013101 9.5e-15 84.7 239 30.5
Sopen01g006290 Solanum pennellii HOM05D000017 ORTHO05D013101 2.1e-14 83.6 239 31.4
Peaxi162Scf00147g00129 Petunia axillaris HOM05D000017 ORTHO05D001349 1.4e-13 80.9 58 62.1
Peaxi162Scf00209g00944 Petunia axillaris HOM05D000017 ORTHO05D009364 1.4e-13 80.9 58 62.1
Peaxi162Scf00100g00816 Petunia axillaris HOM05D000017 ORTHO05D009364 1.8e-13 80.5 58 62.1
Nitab4.5_0005340g0060 Nicotiana tabacum HOM05D000017 ORTHO05D001349 3.0e-13 79.7 210 32.4
Peaxi162Scf00050g02422 Petunia axillaris HOM05D000017 ORTHO05D001349 3.0e-13 79.7 54 70.4
Peaxi162Scf00137g00149 Petunia axillaris HOM05D000017 ORTHO05D001349 5.2e-13 79.0 58 60.3
Peaxi162Scf00322g00921 Petunia axillaris HOM05D000017 ORTHO05D009364 5.2e-13 79.0 57 66.7
Peaxi162Scf00897g00039 Petunia axillaris HOM05D000017 ORTHO05D001349 2.0e-12 77.0 58 60.3
Peaxi162Scf00851g00031 Petunia axillaris HOM05D000017 ORTHO05D001349 5.7e-12 75.5 58 60.3
Peaxi162Scf00562g00023 Petunia axillaris HOM05D000017 ORTHO05D009364 7.5e-12 75.1 58 63.8
Peaxi162Scf00914g00523 Petunia axillaris HOM05D000017 ORTHO05D009364 7.5e-12 75.1 58 63.8
Peaxi162Scf00929g00712 Petunia axillaris HOM05D000017 ORTHO05D001349 9.8e-12 74.7 57 61.4
Sopen12g023710 Solanum pennellii HOM05D000017 ORTHO05D000013 9.8e-12 74.7 220 30.5
Nitab4.5_0001601g0010 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.3e-11 74.3 124 47.6
Nitab4.5_0002469g0060 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.7e-11 73.9 230 29.1
Sopen12g007590 Solanum pennellii HOM05D000017 ORTHO05D001349 1.7e-11 73.9 235 41.7
Nitab4.5_0007142g0050 Nicotiana tabacum HOM05D000017 ORTHO05D001349 2.8e-11 73.2 50 70.0
Peaxi162Scf00685g00712 Petunia axillaris HOM05D000017 ORTHO05D009364 2.8e-11 73.2 54 66.7
Peaxi162Scf00780g00017 Petunia axillaris HOM05D000017 ORTHO05D009364 2.8e-11 73.2 58 63.8
Nitab4.5_0009003g0050 Nicotiana tabacum HOM05D000017 ORTHO05D009364 3.7e-11 72.8 59 59.3
Peaxi162Scf00005g00467 Petunia axillaris HOM05D000017 ORTHO05D009364 4.9e-11 72.4 58 62.1
Nitab4.5_0000078g0300 Nicotiana tabacum HOM05D000017 ORTHO05D009364 6.3e-11 72.0 58 60.3
Nitab4.5_0001284g0050 Nicotiana tabacum HOM05D000017 ORTHO05D001349 8.3e-11 71.6 209 35.9
Peaxi162Scf00036g00318 Petunia axillaris HOM05D000017 ORTHO05D009364 8.3e-11 71.6 68 57.4
Nitab4.5_0006080g0030 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.4e-10 70.9 55 70.9
Nitab4.5_0000944g0050 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.8e-10 70.5 57 57.9
Nitab4.5_0000982g0160 Nicotiana tabacum HOM05D000017 ORTHO05D009364 1.8e-10 70.5 59 59.3
Nitab4.5_0001215g0130 Nicotiana tabacum HOM05D000017 ORTHO05D009364 1.8e-10 70.5 58 55.2
Nitab4.5_0000923g0170 Nicotiana tabacum HOM05D000017 ORTHO05D009364 2.4e-10 70.1 58 55.2
Peaxi162Scf00361g00712 Petunia axillaris HOM05D000017 ORTHO05D009364 3.1e-10 69.7 58 60.3
Peaxi162Scf00043g00613 Petunia axillaris HOM05D000017 ORTHO05D001349 4.1e-10 69.3 59 54.2
Peaxi162Scf00528g00120 Petunia axillaris HOM05D000017 ORTHO05D009364 4.1e-10 69.3 59 54.2
Peaxi162Scf00556g00017 Petunia axillaris HOM05D000017 ORTHO05D009364 4.1e-10 69.3 59 54.2
Peaxi162Scf00677g00218 Petunia axillaris HOM05D000017 ORTHO05D009364 4.1e-10 69.3 59 54.2
Peaxi162Scf01138g00017 Petunia axillaris HOM05D000017 ORTHO05D009364 4.1e-10 69.3 59 54.2
Nitab4.5_0000147g0090 Nicotiana tabacum HOM05D000017 ORTHO05D001349 5.4e-10 68.9 58 55.2
Nitab4.5_0003518g0020 Nicotiana tabacum HOM05D000017 ORTHO05D009364 5.4e-10 68.9 59 54.2
Peaxi162Scf00802g00027 Petunia axillaris HOM05D000017 ORTHO05D001349 5.4e-10 68.9 55 58.2
Nitab4.5_0001839g0050 Nicotiana tabacum HOM05D000017 ORTHO05D012383 7.0e-10 68.6 215 45.1
Nitab4.5_0003726g0040 Nicotiana tabacum HOM05D000017 ORTHO05D001349 7.0e-10 68.6 191 39.8
Nitab4.5_0010627g0020 Nicotiana tabacum HOM05D000017 ORTHO05D009364 9.2e-10 68.2 58 53.4
Peaxi162Scf00238g00713 Petunia axillaris HOM05D000017 ORTHO05D009364 9.2e-10 68.2 58 55.2
PGSC0003DMG400017611 Solanum tuberosum HOM05D000017 ORTHO05D001349 9.2e-10 68.2 58 55.2
Nitab4.5_0000792g0170 Nicotiana tabacum HOM05D000017 ORTHO05D009364 1.2e-09 67.8 58 53.4
Nitab4.5_0001576g0040 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.2e-09 67.8 55 56.4
Nitab4.5_0009005g0050 Nicotiana tabacum HOM05D000017 ORTHO05D009364 1.2e-09 67.8 54 59.3
Peaxi162Scf00068g02417 Petunia axillaris HOM05D000017 ORTHO05D030244 1.2e-09 67.8 58 51.7
Nitab4.5_0000022g0040 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.6e-09 67.4 124 44.4
Nitab4.5_0000685g0030 Nicotiana tabacum HOM05D000017 ORTHO05D009364 1.6e-09 67.4 58 51.7
Peaxi162Scf00503g00217 Petunia axillaris HOM05D000017 ORTHO05D009364 1.6e-09 67.4 58 58.6
Nitab4.5_0000032g0070 Nicotiana tabacum HOM05D000017 ORTHO05D001349 2.0e-09 67.0 58 55.2
Nitab4.5_0000426g0250 Nicotiana tabacum HOM05D000017 ORTHO05D009364 2.0e-09 67.0 124 40.3
Peaxi162Scf00448g00049 Petunia axillaris HOM05D000017 ORTHO05D009364 2.0e-09 67.0 54 59.3
Nitab4.5_0000800g0050 Nicotiana tabacum HOM05D000017 ORTHO05D001349 2.7e-09 66.6 124 58.1
Sopen04g024810 Solanum pennellii HOM05D000017 ORTHO05D000002 2.7e-09 66.6 66 81.8
Nitab4.5_0002569g0010 Nicotiana tabacum HOM05D000017 ORTHO05D001349 3.5e-09 66.2 217 30.9
Nitab4.5_0001839g0080 Nicotiana tabacum HOM05D000017 ORTHO05D001349 4.5e-09 65.9 221 34.4
Nitab4.5_0002307g0020 Nicotiana tabacum HOM05D000017 ORTHO05D001349 4.5e-09 65.9 58 53.4
Nitab4.5_0005112g0050 Nicotiana tabacum HOM05D000017 ORTHO05D009364 4.5e-09 65.9 58 53.4
Peaxi162Scf00131g00813 Petunia axillaris HOM05D000017 ORTHO05D001349 4.5e-09 65.9 58 51.7
Peaxi162Scf00365g00058 Petunia axillaris HOM05D000017 ORTHO05D001349 4.5e-09 65.9 58 51.7
Solyc05g050515.1 Solanum lycopersicum HOM05D000017 ORTHO05D391569 4.5e-09 65.9 179 48.6
Nitab4.5_0001495g0110 Nicotiana tabacum HOM05D000017 ORTHO05D009364 5.9e-09 65.5 51 58.8
Nitab4.5_0010397g0030 Nicotiana tabacum HOM05D000017 ORTHO05D001349 5.9e-09 65.5 159 40.9
Nitab4.5_0000444g0290 Nicotiana tabacum HOM05D000017 ORTHO05D001349 7.8e-09 65.1 218 28.4
Peaxi162Scf00485g01217 Petunia axillaris HOM05D000017 ORTHO05D009364 1.7e-08 63.9 54 61.1
Nitab4.5_0000231g0100 Nicotiana tabacum HOM05D000017 ORTHO05D001349 2.3e-08 63.5 60 51.7
Nitab4.5_0000442g0270 Nicotiana tabacum HOM05D000017 ORTHO05D009364 2.3e-08 63.5 51 54.9
Solyc08g150149.1 Solanum lycopersicum HOM05D000017 ORTHO05D013101 2.3e-08 63.5 55 52.7
Solyc10g055423.1 Solanum lycopersicum HOM05D000017 ORTHO05D013101 2.3e-08 63.5 55 52.7
Sopen05g008290 Solanum pennellii HOM05D000002 ORTHO05D001349 2.3e-08 63.5 55 52.7
Nitab4.5_0001219g0040 Nicotiana tabacum HOM05D000017 ORTHO05D009364 2.9e-08 63.2 58 50.0
Nitab4.5_0006809g0020 Nicotiana tabacum HOM05D000017 ORTHO05D001349 2.9e-08 63.2 58 55.2
Nitab4.5_0007976g0030 Nicotiana tabacum HOM05D000017 ORTHO05D001349 2.9e-08 63.2 56 55.4
Peaxi162Scf00024g00314 Petunia axillaris HOM05D000017 ORTHO05D001349 2.9e-08 63.2 83 44.6
Peaxi162Scf00174g01017 Petunia axillaris HOM05D000017 ORTHO05D015725 2.9e-08 63.2 56 51.8
Peaxi162Scf00906g00226 Petunia axillaris HOM05D000017 ORTHO05D009364 2.9e-08 63.2 49 65.3
Nitab4.5_0000025g0060 Nicotiana tabacum HOM05D000017 ORTHO05D009364 3.8e-08 62.8 58 53.4
Peaxi162Scf00066g01917 Petunia axillaris HOM05D000017 ORTHO05D015725 3.8e-08 62.8 58 50.0
Nitab4.5_0001276g0010 Nicotiana tabacum HOM05D000017 ORTHO05D001349 5.0e-08 62.4 56 51.8
Nitab4.5_0003857g0070 Nicotiana tabacum HOM05D000017 ORTHO05D009364 5.0e-08 62.4 58 50.0
Sopen07g029560 Solanum pennellii HOM05D000017 ORTHO05D013101 5.0e-08 62.4 55 50.9
PGSC0003DMG400045289 Solanum tuberosum HOM05D000017 ORTHO05D013101 5.0e-08 62.4 55 52.7
Peaxi162Scf00202g00095 Petunia axillaris HOM05D000017 ORTHO05D001349 6.6e-08 62.0 87 42.5
Solyc01g111480.1 Solanum lycopersicum HOM05D000017 ORTHO05D009364 8.6e-08 61.6 58 50.0
Solyc02g062435.1 Solanum lycopersicum HOM05D000017 ORTHO05D009364 8.6e-08 61.6 58 50.0
Solyc03g122210.1 Solanum lycopersicum HOM05D000017 ORTHO05D009364 8.6e-08 61.6 58 50.0
Solyc04g016085.1 Solanum lycopersicum HOM05D000017 ORTHO05D001349 8.6e-08 61.6 58 50.0
Solyc09g008110.1 Solanum lycopersicum HOM05D000017 ORTHO05D009364 8.6e-08 61.6 58 50.0
Sopen07g006850 Solanum pennellii HOM05D000017 ORTHO05D000013 8.6e-08 61.6 58 50.0
Peaxi162Scf00098g01533 Petunia axillaris HOM05D000017 ORTHO05D001349 1.1e-07 61.2 59 45.8
Peaxi162Scf00111g01137 Petunia axillaris HOM05D000017 ORTHO05D001349 1.1e-07 61.2 59 45.8
Peaxi162Scf00256g00811 Petunia axillaris HOM05D000017 ORTHO05D001349 1.1e-07 61.2 59 45.8
Nitab4.5_0001117g0050 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.5e-07 60.8 58 51.7
Peaxi162Scf00194g00325 Petunia axillaris HOM05D000017 ORTHO05D001349 1.5e-07 60.8 59 45.8
PGSC0003DMG400002554 Solanum tuberosum HOM05D000017 ORTHO05D009364 1.5e-07 60.8 58 50.0
Nitab4.5_0001784g0030 Nicotiana tabacum HOM05D000017 ORTHO05D009364 1.9e-07 60.5 59 47.5
Sopen01g025160 Solanum pennellii HOM05D000017 ORTHO05D001349 2.5e-07 60.1 55 50.9
Sopen04g014920 Solanum pennellii HOM05D000017 ORTHO05D000013 2.5e-07 60.1 58 48.3
Nitab4.5_0000353g0040 Nicotiana tabacum HOM05D000017 ORTHO05D001349 3.3e-07 59.7 57 43.9
Nitab4.5_0001038g0110 Nicotiana tabacum HOM05D000017 ORTHO05D001349 3.3e-07 59.7 124 33.1
Sopen07g022680 Solanum pennellii HOM05D000017 ORTHO05D013101 3.3e-07 59.7 55 50.9
Nitab4.5_0006709g0030 Nicotiana tabacum HOM05D004715 ORTHO05D005644 4.3e-07 59.3 58 51.7
Nitab4.5_0022073g0010 Nicotiana tabacum HOM05D000017 ORTHO05D001349 4.3e-07 59.3 59 45.8
Peaxi162Scf00147g00092 Petunia axillaris HOM05D000017 ORTHO05D001349 4.3e-07 59.3 58 44.8
Peaxi162Scf00375g00621 Petunia axillaris HOM05D000017 ORTHO05D001349 4.3e-07 59.3 59 47.5
Nitab4.5_0000936g0100 Nicotiana tabacum HOM05D000017 ORTHO05D009364 5.6e-07 58.9 51 52.9
Nitab4.5_0004903g0040 Nicotiana tabacum HOM05D000017 ORTHO05D001349 5.6e-07 58.9 59 47.5
Nitab4.5_0012220g0010 Nicotiana tabacum HOM05D000017 ORTHO05D009364 5.6e-07 58.9 59 47.5
Peaxi162Scf00228g00086 Petunia axillaris HOM05D000017 ORTHO05D015725 5.6e-07 58.9 56 53.6
Peaxi162Scf00811g00033 Petunia axillaris HOM05D000017 ORTHO05D009364 5.6e-07 58.9 58 53.4
PGSC0003DMG400027290 Solanum tuberosum HOM05D000017 ORTHO05D013101 5.6e-07 58.9 54 50.0
Peaxi162Scf00211g00119 Petunia axillaris HOM05D000017 ORTHO05D001349 7.3e-07 58.5 58 58.6
Solyc02g031730.1 Solanum lycopersicum HOM05D000017 ORTHO05D009364 7.3e-07 58.5 58 48.3
Sopen06g014720 Solanum pennellii HOM05D000017 ORTHO05D013101 7.3e-07 58.5 55 50.9
Nitab4.5_0001059g0080 Nicotiana tabacum HOM05D000017 ORTHO05D001349 9.5e-07 58.2 58 50.0
Nitab4.5_0006105g0030 Nicotiana tabacum HOM05D000017 ORTHO05D001349 9.5e-07 58.2 45 62.2
PGSC0003DMG400039650 Solanum tuberosum HOM05D000017 ORTHO05D013101 9.5e-07 58.2 54 51.9
Nitab4.5_0002052g0150 Nicotiana tabacum HOM05D000017 ORTHO05D009364 1.2e-06 57.8 58 48.3
Peaxi162Scf00222g00240 Petunia axillaris HOM05D000017 ORTHO05D001349 1.2e-06 57.8 59 44.1
PGSC0003DMG400036451 Solanum tuberosum HOM05D000017 ORTHO05D013101 1.2e-06 57.8 55 50.9
Nitab4.5_0003858g0110 Nicotiana tabacum HOM05D000017 ORTHO05D009364 1.6e-06 57.4 51 52.9
Nitab4.5_0006785g0050 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.6e-06 57.4 69 44.9
Nitab4.5_0010359g0010 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.6e-06 57.4 58 46.6
Peaxi162Scf01530g00041 Petunia axillaris HOM05D000017 ORTHO05D009364 1.6e-06 57.4 58 50.0
PGSC0003DMG400039693 Solanum tuberosum HOM05D000017 ORTHO05D009364 1.6e-06 57.4 57 47.4
Nitab4.5_0011988g0020 Nicotiana tabacum HOM05D000017 ORTHO05D015725 2.1e-06 57.0 54 53.7
Peaxi162Scf00406g00417 Petunia axillaris HOM05D000017 ORTHO05D009364 2.1e-06 57.0 55 50.9
Sopen05g016460 Solanum pennellii HOM05D000004 ORTHO05D009561 2.1e-06 57.0 60 50.0
Nitab4.5_0000427g0050 Nicotiana tabacum HOM05D000017 ORTHO05D009364 2.8e-06 56.6 59 42.4
Nitab4.5_0001544g0080 Nicotiana tabacum HOM05D000017 ORTHO05D009364 2.8e-06 56.6 57 50.9
Peaxi162Scf00259g00038 Petunia axillaris HOM05D000017 ORTHO05D009364 2.8e-06 56.6 51 52.9
Peaxi162Scf01007g00120 Petunia axillaris HOM05D000017 ORTHO05D001349 2.8e-06 56.6 59 55.9
Sopen09g015990 Solanum pennellii HOM05D000017 ORTHO05D000013 2.8e-06 56.6 60 50.0
PGSC0003DMG400020379 Solanum tuberosum HOM05D000017 ORTHO05D009364 2.8e-06 56.6 54 50.0
Nitab4.5_0001651g0110 Nicotiana tabacum HOM05D000017 ORTHO05D009364 3.6e-06 56.2 46 58.7
Nitab4.5_0006039g0020 Nicotiana tabacum HOM05D000017 ORTHO05D001349 4.7e-06 55.8 59 45.8
Peaxi162Scf00133g00123 Petunia axillaris HOM05D000017 ORTHO05D009364 4.7e-06 55.8 57 43.9
Sopen11g025620 Solanum pennellii HOM05D000017 ORTHO05D001349 4.7e-06 55.8 58 44.8
CAN.G770.1 Capsicum annuum HOM05D000017 ORTHO05D018899 6.1e-06 55.5 50 54.0
Nitab4.5_0004706g0030 Nicotiana tabacum HOM05D000017 ORTHO05D009364 6.1e-06 55.5 59 42.4
Sopen05g012050 Solanum pennellii HOM05D000017 ORTHO05D000013 6.1e-06 55.5 60 48.3
Nitab4.5_0003938g0020 Nicotiana tabacum HOM05D000017 ORTHO05D015725 8.0e-06 55.1 58 50.0
Sopen11g026090 Solanum pennellii HOM05D000017 ORTHO05D000013 8.0e-06 55.1 60 50.0


User provided reference genes

Program Settings