Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g150110.1 Solanum lycopersicum HOM05D000107 ORTHO05D016691 8.8e-53 209.9 99 100.0
Sopen01g006480 Solanum pennellii HOM05D000107 ORTHO05D000062 1.4e-50 202.6 99 96.0
Solyc02g081087.1 Solanum lycopersicum HOM05D000107 ORTHO05D016691 4.2e-47 191.0 91 97.8
Sopen06g014270 Solanum pennellii HOM05D000107 ORTHO05D014265 1.2e-46 189.5 99 89.9
Sopen10g012240 Solanum pennellii HOM05D000107 ORTHO05D000385 1.4e-45 186.0 99 87.9
Solyc10g039193.1 Solanum lycopersicum HOM05D000107 ORTHO05D016691 4.5e-41 171.0 99 80.8
Solyc08g065765.1 Solanum lycopersicum HOM05D000107 ORTHO05D016691 1.1e-31 139.8 98 66.3
Sopen12g014820 Solanum pennellii HOM05D000107 ORTHO05D000062 9.5e-23 110.2 52 98.1
Solyc05g040065.1 Solanum lycopersicum HOM05D000107 ORTHO05D016691 5.4e-18 94.4 48 89.6
Sopen02g004240 Solanum pennellii HOM05D000107 ORTHO05D000062 6.0e-17 90.9 42 97.6
PGSC0003DMG400042404 Solanum tuberosum HOM05D000107 ORTHO05D014265 6.0e-17 90.9 57 75.4
Solyc05g150139.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 5.0e-16 87.8 51 80.4
AUR62042815 Chenopodium quinoa HOM05D000107 ORTHO05D016691 8.6e-16 87.0 86 47.7
AUR62030809 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.5e-15 85.5 86 47.7
AUR62018241 Chenopodium quinoa HOM05D000107 ORTHO05D000062 5.6e-15 84.3 87 46.0
AUR62037118 Chenopodium quinoa HOM05D010065 ORTHO05D000385 2.1e-14 82.4 82 47.6
AUR62042816 Chenopodium quinoa HOM05D010065 ORTHO05D000385 2.1e-14 82.4 87 44.8
AUR62024349 Chenopodium quinoa HOM05D000107 ORTHO05D000062 6.2e-14 80.9 96 43.8
Ah.01g009330 Amaranthus hybridus HOM05D000107 ORTHO05D000062 8.1e-14 80.5 93 43.0
AUR62040123 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.1e-13 80.1 89 37.1
Ah.13g065570 Amaranthus hybridus HOM05D000107 ORTHO05D000062 3.1e-13 78.6 93 41.9
AUR62040356 Chenopodium quinoa HOM05D000107 ORTHO05D000062 3.1e-13 78.6 96 42.7
Ah.04g158600 Amaranthus hybridus HOM05D000107 ORTHO05D000062 4.0e-13 78.2 93 41.9
AUR62043742 Chenopodium quinoa HOM05D000107 ORTHO05D000062 4.0e-13 78.2 96 42.7
Ah.01g011060 Amaranthus hybridus HOM05D000107 ORTHO05D000062 5.2e-13 77.8 93 41.9
AUR62036640 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.2e-12 76.6 96 40.6
AUR62031350 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.5e-12 76.3 96 41.7
AUR62042513 Chenopodium quinoa HOM05D000107 ORTHO05D000062 9.9e-12 73.6 97 44.3
AUR62022417 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.3e-11 73.2 96 40.6
AUR62004862 Chenopodium quinoa HOM05D000107 ORTHO05D000062 3.7e-11 71.6 96 39.6
PGSC0003DMG400043689 Solanum tuberosum HOM05D000107 ORTHO05D014265 3.7e-11 71.6 64 60.9
AUR62033022 Chenopodium quinoa HOM05D000107 ORTHO05D000062 6.4e-11 70.9 96 38.5
AUR62033024 Chenopodium quinoa HOM05D000107 ORTHO05D000062 6.4e-11 70.9 96 38.5
AUR62014956 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.1e-10 70.1 96 40.6
AUR62015626 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.1e-10 70.1 93 34.4
AUR62038913 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.4e-10 69.7 93 35.5
AUR62040733 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.4e-10 69.7 93 35.5
AUR62028444 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.9e-10 69.3 93 35.5
EL10Ac9g22743 Beta vulgaris HOM05D000107 ORTHO05D000062 3.2e-10 68.6 90 41.1
AUR62036836 Chenopodium quinoa HOM05D000107 ORTHO05D016691 3.2e-10 68.6 93 35.5
AUR62027609 Chenopodium quinoa HOM05D000107 ORTHO05D000062 4.1e-10 68.2 89 40.4
EL10Ac4g08613 Beta vulgaris HOM05D000107 ORTHO05D000062 5.4e-10 67.8 80 38.8
EL10Ac1g01842 Beta vulgaris HOM05D000107 ORTHO05D000062 9.2e-10 67.0 90 38.9
AUR62034026 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.2e-09 66.6 93 35.5
AUR62035729 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.6e-09 66.2 98 39.8
AUR62039806 Chenopodium quinoa HOM05D000107 ORTHO05D000062 3.5e-09 65.1 89 44.9
AUR62013915 Chenopodium quinoa HOM05D000107 ORTHO05D000062 6.0e-09 64.3 82 40.2
AUR62038387 Chenopodium quinoa HOM05D000107 ORTHO05D000062 6.0e-09 64.3 93 34.4
AUR62043993 Chenopodium quinoa HOM05D000107 ORTHO05D000062 6.0e-09 64.3 89 40.4
AUR62029632 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.0e-08 63.5 82 40.2
AUR62007768 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.3e-08 63.2 82 40.2
AUR62041975 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.3e-08 63.2 82 39.0
SGA_v2.0_scaffold174G39225 Striga asiatica HOM05D000107 ORTHO05D000062 1.7e-08 62.8 99 34.3
Lj4g0021587 Lotus japonicus HOM05D000107 ORTHO05D000062 3.0e-08 62.0 85 34.1
AUR62018288 Chenopodium quinoa HOM05D004615 ORTHO05D000062 5.1e-08 61.2 97 37.1
AUR62034994 Chenopodium quinoa HOM05D000107 ORTHO05D000062 5.1e-08 61.2 82 39.0
AUR62034995 Chenopodium quinoa HOM05D000107 ORTHO05D011763 8.6e-08 60.5 82 39.0
AUR62026240 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.1e-07 60.1 82 37.8
Solyc10g050065.1 Solanum lycopersicum HOM05D000107 ORTHO05D014265 1.9e-07 59.3 27 100.0
AUR62026707 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.5e-07 58.9 82 37.8
AUR62030154 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.5e-07 58.9 72 38.9
AUR62042259 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.5e-07 58.9 97 36.1
AUR62043995 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.5e-07 58.9 98 36.7
AUR62012549 Chenopodium quinoa HOM05D004615 ORTHO05D000385 3.3e-07 58.5 98 37.8
Sopen09g017230 Solanum pennellii HOM05D000107 ORTHO05D014265 3.3e-07 58.5 59 49.2
AUR62038390 Chenopodium quinoa HOM05D000107 ORTHO05D000062 9.5e-07 57.0 80 33.8
AUR62019655 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.6e-06 56.2 72 37.5
AUR62025845 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.6e-06 56.2 81 33.3
AUR62034741 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.1e-06 55.8 93 39.8
AUR62019544 Chenopodium quinoa HOM05D000107 ORTHO05D000062 4.7e-06 54.7 61 45.9
Solyc06g036805.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 4.7e-06 54.7 26 92.3
AUR62034497 Chenopodium quinoa HOM05D000107 ORTHO05D000062 8.1e-06 53.9 82 35.4


User provided reference genes

Program Settings