Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g055850.3 Solanum lycopersicum HOM05D007078 ORTHO05D008745 2.1e-129 465.7 237 100.0
Sopen05g034250 Solanum pennellii HOM05D007078 ORTHO05D008745 3.1e-128 461.8 237 98.7
PGSC0003DMG400023469 Solanum tuberosum HOM05D007078 ORTHO05D008745 6.0e-124 447.6 237 97.0
Nitab4.5_0005757g0030 Nicotiana tabacum HOM05D007078 ORTHO05D008745 2.1e-105 386.0 232 82.8
Nitab4.5_0001436g0040 Nicotiana tabacum HOM05D007078 ORTHO05D008745 1.8e-104 382.9 232 82.3
Dinv11266 Davidia involucrata HOM05D007078 ORTHO05D008745 2.8e-73 279.3 236 65.3
Lsat_1_v5_gn_9_1840 Lactuca sativa HOM05D007078 ORTHO05D008745 2.4e-72 276.2 233 65.2
QL12p022959 Quercus lobata HOM05D007078 ORTHO05D008745 3.1e-72 275.8 231 64.5
CANSAT25G2561 Cannabis sativa HOM05D007078 ORTHO05D008745 2.9e-70 269.2 162 84.0
MD03G1271700 Malus domestica HOM05D007078 ORTHO05D008745 6.5e-70 268.1 236 62.3
Hma1.2p1_0628F.1_g191760 Hydrangea macrophylla HOM05D007078 ORTHO05D008745 4.2e-69 265.4 232 62.9
Manes.05G071800 Manihot esculenta HOM05D007078 ORTHO05D008745 4.2e-69 265.4 241 60.2
CiPaw.07G095800 Carya illinoinensis HOM05D007078 ORTHO05D008745 7.2e-69 264.6 233 61.4
TWI59G1055 Tripterygium wilfordii HOM05D007078 ORTHO05D008745 9.4e-69 264.2 234 61.1
CsaV3_7G028490 Cucumis sativus L. HOM05D007078 ORTHO05D008745 1.2e-68 263.8 230 61.7
GSVIVG01011060001 Vitis vinifera HOM05D007078 ORTHO05D008745 1.2e-68 263.8 198 69.7
Aqoxy5G00564 Aquilegia oxysepala HOM05D007078 ORTHO05D008745 2.1e-68 263.1 202 68.3
Prupe.8G247900 Prunus persica HOM05D007078 ORTHO05D008745 2.1e-68 263.1 239 61.5
CSS0036917 Camellia sinensis var. sinensis HOM05D007078 ORTHO05D008745 3.6e-68 262.3 234 61.1
CSS0044942 Camellia sinensis var. sinensis HOM05D007078 ORTHO05D008745 1.0e-67 260.8 234 60.7
Glyma.19G152600 Glycine max HOM05D007078 ORTHO05D008745 1.0e-67 260.8 224 64.3
Gorai.004G084200 Gossypium raimondii HOM05D007078 ORTHO05D008745 1.0e-67 260.8 238 61.8
HanXRQChr15g0466581 Helianthus annuus HOM05D007078 ORTHO05D008745 1.4e-67 260.4 226 64.2
Cfa006079 Carpinus fangiana HOM05D007078 ORTHO05D008745 1.8e-67 260.0 212 64.2
Eucgr.K03409 Eucalyptus grandis HOM05D007078 ORTHO05D008745 1.8e-67 260.0 218 64.2
DCAR_018382 Daucus carota HOM05D007078 ORTHO05D008745 2.3e-67 259.6 157 82.2
ECA247G1342 Erigeron canadensis HOM05D007078 ORTHO05D008745 5.2e-67 258.5 172 77.9
Medtr7g094220 Medicago truncatula HOM05D007078 ORTHO05D008745 5.2e-67 258.5 157 82.2
RcHm_v2.0_Chr6g0291981 Rosa chinensis HOM05D007078 ORTHO05D008745 5.2e-67 258.5 233 59.2
Atru.chr5.1330 Acer truncatum HOM05D007078 ORTHO05D008745 6.8e-67 258.1 233 60.5
MELO3C015872.2 Cucumis melo HOM05D007078 ORTHO05D008745 6.8e-67 258.1 191 70.2
Gohir.D08G078400 Gossypium hirsutum HOM05D007078 ORTHO05D008745 6.8e-67 258.1 238 61.3
Oeu047893.1 Olea europaea HOM05D007078 ORTHO05D008745 8.8e-67 257.7 227 62.1
Migut.D00250 Erythranthe guttata HOM05D007078 ORTHO05D008745 1.5e-66 256.9 199 68.3
vmacro02537 Vaccinium macrocarpon HOM05D007078 ORTHO05D008745 1.5e-66 256.9 239 58.2
EL10Ac7g17029 Beta vulgaris HOM05D007078 ORTHO05D008745 2.0e-66 256.5 236 61.4
Sed0016724 Sechium edule HOM05D007078 ORTHO05D008745 2.0e-66 256.5 191 68.6
arahy.Tifrunner.gnm1.ann1.9GKU3H Arachis hypogaea HOM05D007078 ORTHO05D008745 2.6e-66 256.1 177 73.4
Nn3g21178 Nelumbo nucifera HOM05D007078 ORTHO05D008745 2.6e-66 256.1 187 71.1
arahy.Tifrunner.gnm1.ann1.ERKA9X Arachis hypogaea HOM05D007078 ORTHO05D008745 3.4e-66 255.8 222 64.4
VMungo1383G1152 Vigna mungo HOM05D007078 ORTHO05D008745 5.7e-66 255.0 157 79.6
Cc09_g03260 Coffea canephora HOM05D007078 ORTHO05D008745 7.5e-66 254.6 158 79.1
Potri.014G137300 Populus trichocarpa HOM05D007078 ORTHO05D008745 7.5e-66 254.6 242 58.3
TPR.G32805 Trifolium pratense HOM05D007078 ORTHO05D008745 9.7e-66 254.2 161 79.5
Duzib138G1888 Durio zibethinus HOM05D007078 ORTHO05D008745 1.3e-65 253.8 232 59.5
Lj1g0026447 Lotus japonicus HOM05D007078 ORTHO05D008745 1.3e-65 253.8 192 68.8
Os05g0404400 Oryza sativa ssp. japonica HOM05D007078 ORTHO05D008745 1.3e-65 253.8 141 86.5
Ca_08555_v3 Cicer arietinum L. HOM05D007078 ORTHO05D008745 2.2e-65 253.1 169 78.1
Cpa.g.sc9.128 Carica papaya HOM05D007078 ORTHO05D008745 2.8e-65 252.7 217 61.3
Ciclev10022169m.g Citrus clementina HOM05D007078 ORTHO05D008745 3.7e-65 252.3 231 61.0
Psat3g066400 Pisum sativum HOM05D007078 ORTHO05D008745 4.8e-65 251.9 157 79.6
TAR362G1057 Trochodendron aralioides HOM05D007078 ORTHO05D008745 4.8e-65 251.9 194 68.0
PGR044G0767 Punica granatum HOM05D007078 ORTHO05D008745 6.3e-65 251.5 141 85.1
PSO832G3632 Papaver somniferum HOM05D007078 ORTHO05D008745 1.1e-64 250.8 213 60.1
FAN27G0292 Fragaria x ananassa HOM05D007078 ORTHO05D008745 1.4e-64 250.4 142 84.5
PSO210G6132 Papaver somniferum HOM05D007078 ORTHO05D008745 1.4e-64 250.4 213 60.6
MD11G1292300 Malus domestica HOM05D007078 ORTHO05D008745 2.4e-64 249.6 190 70.0
FvH4_2g24170 Fragaria vesca HOM05D007078 ORTHO05D008745 3.1e-64 249.2 236 59.3
Phvul.001G147500 Phaseolus vulgaris HOM05D007078 ORTHO05D008745 3.1e-64 249.2 191 67.0
ATR0626G125 Amborella trichopoda HOM05D007078 ORTHO05D008745 4.1e-64 248.8 190 68.9
THA.LOC104823061 Tarenaya hassleriana HOM05D007078 ORTHO05D008745 1.2e-63 247.3 204 64.2
Haze_04771 Corylus avellana HOM05D007078 ORTHO05D008745 2.7e-63 246.1 162 75.9
CDE12G0236 Ceratophyllum demersum HOM05D007078 ORTHO05D008745 5.9e-63 245.0 170 72.9
Sp4g29960 Schrenkiella parvula HOM05D007078 ORTHO05D008745 7.7e-63 244.6 201 64.2
unitig_0.g636 Utricularia gibba HOM05D007078 ORTHO05D008745 1.0e-62 244.2 196 67.9
Lj1C43T3 Lonicera japonica HOM05D007078 ORTHO05D008745 1.7e-62 243.4 236 59.7
Thecc.01G285900 Theobroma cacao HOM05D007078 ORTHO05D008745 1.7e-62 243.4 224 61.2
A05p00060 Brassica napus HOM05D007078 ORTHO05D008745 3.8e-62 242.3 161 73.9
BraA05t19002Z Brassica rapa HOM05D007078 ORTHO05D008745 3.8e-62 242.3 161 73.9
Thhalv10001627m.g Eutrema salsugineum HOM05D007078 ORTHO05D008745 6.5e-62 241.5 197 64.5
AT2G48070 Arabidopsis thaliana HOM05D007078 ORTHO05D008745 1.1e-61 240.7 141 80.9
FAN15G0223 Fragaria x ananassa HOM05D007078 ORTHO05D008745 1.1e-61 240.7 237 57.8
BcaC02g12558 Brassica carinata HOM05D007078 ORTHO05D008745 2.5e-61 239.6 169 70.4
BolSC55t61232H Brassica oleracea HOM05D007078 ORTHO05D008745 2.5e-61 239.6 169 70.4
Carub.0004s3077 Capsella rubella HOM05D007078 ORTHO05D008745 2.5e-61 239.6 140 80.7
BcaB02g08732 Brassica carinata HOM05D007078 ORTHO05D008745 3.2e-61 239.2 141 79.4
AL4G47660 Arabidopsis lyrata HOM05D007078 ORTHO05D008745 5.5e-61 238.4 169 70.4
CARHR143460 Cardamine hirsuta HOM05D007078 ORTHO05D008745 5.5e-61 238.4 161 72.7
Glyma.03G149600 Glycine max HOM05D007078 ORTHO05D008745 1.6e-60 236.9 218 61.5
PGR142G0265 Punica granatum HOM05D007078 ORTHO05D008745 1.6e-60 236.9 141 80.1
Sc24g0004060 Simmondsia chinensis HOM05D007078 ORTHO05D008745 3.6e-60 235.7 217 61.3
Rhsim13G0021200 Rhododendron simsii HOM05D005701 ORTHO05D007058 1.0e-59 234.2 188 63.8
Lalb_Chr01g0020251 Lupinus albus HOM05D007078 ORTHO05D008745 3.0e-59 232.6 159 71.7
AUR62006322 Chenopodium quinoa HOM05D007078 ORTHO05D008745 1.2e-58 230.7 134 82.1
Aa31LG1G29480 Aethionema arabicum HOM05D007078 ORTHO05D008745 1.5e-58 230.3 134 82.1
AagrBONN_evm.TU.Sc2ySwM_117.1018 Anthoceros agrestis HOM05D007078 ORTHO05D008745 4.4e-58 228.8 176 65.9
BNapus_Darmor_BZH_scaffold_188p00040 Brassica napus HOM05D007078 ORTHO05D008745 9.8e-58 227.6 161 70.8
Mapoly0037s0112 Marchantia polymorpha HOM05D007078 ORTHO05D008745 2.8e-57 226.1 177 65.5
Sabra14G0103700 Salix brachista HOM05D007078 ORTHO05D008745 6.3e-57 224.9 230 54.3
FAN24G3201 Fragaria x ananassa HOM05D007078 ORTHO05D008745 5.4e-56 221.9 219 58.4
Ah.08g209880 Amaranthus hybridus HOM05D007078 ORTHO05D008745 1.2e-55 220.7 164 70.1
AUR62026362 Chenopodium quinoa HOM05D007078 ORTHO05D008745 1.6e-55 220.3 129 82.2
Pp3c24_17730 Physcomitrium patens HOM05D007078 ORTHO05D008745 1.1e-53 214.2 159 67.3
SMO358G0655 Selaginella moellendorffii HOM05D007078 ORTHO05D008745 2.1e-52 209.9 166 62.7
CBR_g32237 Chara braunii HOM05D007078 ORTHO05D008745 4.9e-49 198.7 138 67.4
Peaxi162Scf00156g00061 Petunia axillaris HOM05D007078 ORTHO05D008745 1.0e-43 181.0 171 56.7
CDE01G0430 Ceratophyllum demersum HOM05D007078 ORTHO05D008745 4.0e-43 179.1 98 83.7
Oeu006229.1 Olea europaea HOM05D007078 ORTHO05D008745 7.5e-42 174.9 90 90.0
MCO10G051 Micromonas commoda HOM05D007078 ORTHO05D008745 7.8e-39 164.9 130 60.0
Cre03.g145207 Chlamydomonas reinhardtii HOM05D007078 ORTHO05D008745 1.5e-37 160.6 164 51.2
ClCG09G006760 Citrullus lanatus HOM05D007078 ORTHO05D008745 6.2e-36 155.2 185 48.6
MBI19_g21637_MAGBIO Magnolia biondii HOM05D007078 ORTHO05D008745 3.1e-35 152.9 233 42.5
Gohir.A08G070800 Gossypium hirsutum HOM05D007078 ORTHO05D008745 4.9e-33 145.6 173 52.0
PRCOL_00000964 Prasinoderma coloniale HOM05D007078 ORTHO05D008745 4.9e-33 145.6 135 54.8
SGA_v2.0_scaffold11G05787 Striga asiatica HOM05D007078 ORTHO05D008745 6.4e-33 145.2 256 42.6
Actinidia00723 Actinidia chinensis HOM05D007078 ORTHO05D008745 5.4e-32 142.1 75 88.0
Ca_08589_v3 Cicer arietinum L. HOM05D007078 ORTHO05D008745 3.9e-30 136.0 107 70.1
SEGI_07843 Sequoiadendron giganteum HOM05D007078 ORTHO05D008745 2.5e-29 133.3 131 56.5
Zm00001eb287740 Zea mays HOM05D007078 ORTHO05D008745 2.8e-28 129.8 100 68.0
HPP92_019174 Vanilla planifolia HOM05D007078 ORTHO05D008745 3.1e-27 126.3 87 70.1
PGR142G2005 Punica granatum HOM05D007078 ORTHO05D008745 7.6e-26 121.7 75 81.3
Actinidia24309 Actinidia chinensis HOM05D007078 ORTHO05D008745 1.9e-24 117.1 68 80.9
Hma1.2p1_0628F.1_g191770 Hydrangea macrophylla HOM05D007078 ORTHO05D008745 7.3e-21 105.1 56 89.3


User provided reference genes

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