Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g055820.3 Solanum lycopersicum HOM05D006824 ORTHO05D008779 3.3e-59 231.5 116 100.0
Sopen05g034220 Solanum pennellii HOM05D006824 ORTHO05D008779 4.8e-50 201.1 101 95.0
PGSC0003DMG400023472 Solanum tuberosum HOM05D006824 ORTHO05D008779 6.3e-50 200.7 101 95.0
CAN.G694.18 Capsicum annuum HOM05D006824 ORTHO05D008779 4.6e-45 184.5 101 87.1
Nitab4.5_0005183g0030 Nicotiana tabacum HOM05D006824 ORTHO05D008779 6.7e-44 180.6 101 85.1
Lj8A196G47 Lonicera japonica HOM05D006824 ORTHO05D008779 2.6e-35 152.1 91 76.9
Phvul.008G055700 Phaseolus vulgaris HOM05D006824 ORTHO05D008779 7.0e-33 144.1 91 69.2
TPR.G28449 Trifolium pratense HOM05D006824 ORTHO05D008779 7.0e-33 144.1 93 66.7
VMungo1383G3541 Vigna mungo HOM05D006824 ORTHO05D008779 2.0e-32 142.5 91 70.3
Dinv04348 Davidia involucrata HOM05D006824 ORTHO05D008779 3.5e-32 141.7 91 70.3
Potri.010G143000 Populus trichocarpa HOM05D006824 ORTHO05D008779 3.5e-32 141.7 91 63.7
Cc09_g03430 Coffea canephora HOM05D006824 ORTHO05D008779 4.5e-32 141.4 94 68.1
Oeu010150.1 Olea europaea HOM05D006824 ORTHO05D008779 4.5e-32 141.4 101 65.3
Actinidia38928 Actinidia chinensis HOM05D006824 ORTHO05D008779 1.3e-31 139.8 91 65.9
Haze_04530 Corylus avellana HOM05D006824 ORTHO05D008779 1.3e-31 139.8 91 68.1
Atru.chr12.2132 Acer truncatum HOM05D006824 ORTHO05D008779 1.7e-31 139.4 92 66.3
Duzib128G1599 Durio zibethinus HOM05D006824 ORTHO05D008779 2.9e-31 138.7 87 70.1
Medtr7g079530 Medicago truncatula HOM05D006824 ORTHO05D008779 2.9e-31 138.7 93 66.7
Psat3g104840 Pisum sativum HOM05D006824 ORTHO05D008779 3.8e-31 138.3 93 64.5
ECA232G2571 Erigeron canadensis HOM05D006824 ORTHO05D008779 6.5e-31 137.5 93 63.4
GSVIVG01019144001 Vitis vinifera HOM05D006824 ORTHO05D008779 6.5e-31 137.5 87 69.0
Gohir.A02G138800 Gossypium hirsutum HOM05D006824 ORTHO05D008779 1.1e-30 136.7 88 69.3
Gorai.003G050700 Gossypium raimondii HOM05D006824 ORTHO05D008779 1.1e-30 136.7 88 69.3
RcHm_v2.0_Chr3g0448181 Rosa chinensis HOM05D006824 ORTHO05D008779 1.1e-30 136.7 91 65.9
CSS0012922 Camellia sinensis var. sinensis HOM05D006824 ORTHO05D008779 2.5e-30 135.6 91 65.9
CSS0029100 Camellia sinensis var. sinensis HOM05D006824 ORTHO05D008779 2.5e-30 135.6 91 65.9
MD12G1258900 Malus domestica HOM05D006824 ORTHO05D008779 2.5e-30 135.6 92 65.2
Prupe.6G359400 Prunus persica HOM05D006824 ORTHO05D008779 2.5e-30 135.6 93 65.6
Rhsim03G0265800 Rhododendron simsii HOM05D006824 ORTHO05D008779 2.5e-30 135.6 94 61.7
BolC6t38040H Brassica oleracea HOM05D006824 ORTHO05D008779 3.2e-30 135.2 90 66.7
Ca_07965_v3 Cicer arietinum L. HOM05D006824 ORTHO05D008779 3.2e-30 135.2 93 63.4
CANSAT54G2581 Cannabis sativa HOM05D006824 ORTHO05D008779 4.2e-30 134.8 93 63.4
Lsat_1_v5_gn_9_48761 Lactuca sativa HOM05D006824 ORTHO05D008779 4.2e-30 134.8 85 70.6
Sabra10G0110900 Salix brachista HOM05D006824 ORTHO05D008779 4.2e-30 134.8 89 62.9
Thecc.05G206500 Theobroma cacao HOM05D006824 ORTHO05D008779 4.2e-30 134.8 88 69.3
vmacro06000 Vaccinium macrocarpon HOM05D006824 ORTHO05D008779 4.2e-30 134.8 94 60.6
C06p28710 Brassica napus HOM05D006824 ORTHO05D008779 7.2e-30 134.0 88 68.2
CiPaw.08G117600 Carya illinoinensis HOM05D006824 ORTHO05D008779 9.4e-30 133.7 92 64.1
PGR031G0982 Punica granatum HOM05D006824 ORTHO05D008779 1.2e-29 133.3 89 66.3
AUR62006674 Chenopodium quinoa HOM05D006824 ORTHO05D008779 1.6e-29 132.9 91 65.9
CsaV3_2G009540 Cucumis sativus L. HOM05D006824 ORTHO05D008779 1.6e-29 132.9 92 66.3
Glyma.09G252100 Glycine max HOM05D006824 ORTHO05D008779 2.1e-29 132.5 91 64.8
Glyma.18G240500 Glycine max HOM05D006824 ORTHO05D008779 2.1e-29 132.5 91 64.8
HanXRQChr11g0323941 Helianthus annuus HOM05D006824 ORTHO05D008779 2.7e-29 132.1 93 61.3
SGA_v2.0_scaffold13G06472 Striga asiatica HOM05D006824 ORTHO05D008779 2.7e-29 132.1 90 62.2
TAR362G0347 Trochodendron aralioides HOM05D006824 ORTHO05D008779 2.7e-29 132.1 104 61.5
AUR62000332 Chenopodium quinoa HOM05D006824 ORTHO05D008779 3.6e-29 131.7 91 64.8
ClCG11G010940 Citrullus lanatus HOM05D006824 ORTHO05D008779 6.1e-29 131.0 91 63.7
Manes.14G158930 Manihot esculenta HOM05D006824 ORTHO05D008779 6.1e-29 131.0 91 61.5
A07p26320 Brassica napus HOM05D006824 ORTHO05D008779 8.0e-29 130.6 88 67.0
DCAR_005505 Daucus carota HOM05D006824 ORTHO05D008779 8.0e-29 130.6 93 60.2
Migut.F01795 Erythranthe guttata HOM05D006824 ORTHO05D008779 8.0e-29 130.6 90 63.3
arahy.Tifrunner.gnm1.ann1.3Y20MY Arachis hypogaea HOM05D006824 ORTHO05D008779 1.0e-28 130.2 90 60.0
arahy.Tifrunner.gnm1.ann1.8HY0WZ Arachis hypogaea HOM05D006824 ORTHO05D008779 1.0e-28 130.2 90 60.0
BraA07t30276Z Brassica rapa HOM05D006824 ORTHO05D008779 1.4e-28 129.8 88 65.9
AT1G79790 Arabidopsis thaliana HOM05D006824 ORTHO05D008779 1.8e-28 129.4 89 66.3
EL10Ac4g09985 Beta vulgaris HOM05D006824 ORTHO05D008779 2.3e-28 129.0 93 62.4
FAN05G0802 Fragaria x ananassa HOM05D006824 ORTHO05D008779 2.3e-28 129.0 84 67.9
Lalb_Chr19g0126751 Lupinus albus HOM05D006824 ORTHO05D008779 2.3e-28 129.0 93 59.1
TWI14G0776 Tripterygium wilfordii HOM05D006824 ORTHO05D008779 2.3e-28 129.0 91 61.5
FAN02G3690 Fragaria x ananassa HOM05D006824 ORTHO05D008779 3.0e-28 128.6 92 60.9
THA.LOC104813550 Tarenaya hassleriana HOM05D006824 ORTHO05D008779 3.0e-28 128.6 96 58.3
QL01p046721 Quercus lobata HOM05D006824 ORTHO05D008779 3.9e-28 128.3 94 62.8
SalBow3G1586 Salvia bowleyana HOM05D006824 ORTHO05D008779 8.8e-28 127.1 89 61.8
AL2G41760 Arabidopsis lyrata HOM05D006824 ORTHO05D008779 1.1e-27 126.7 88 65.9
CARHR049030 Cardamine hirsuta HOM05D006824 ORTHO05D008779 2.0e-27 125.9 89 66.3
Eucgr.H01379 Eucalyptus grandis HOM05D006824 ORTHO05D008779 2.0e-27 125.9 92 59.8
Sp5g35980 Schrenkiella parvula HOM05D006824 ORTHO05D008779 3.3e-27 125.2 88 65.9
Thhalv10019052m.g Eutrema salsugineum HOM05D006824 ORTHO05D008779 5.7e-27 124.4 88 64.8
Aa31LG4G40 Aethionema arabicum HOM05D006824 ORTHO05D008779 9.7e-27 123.6 89 61.8
PSO170G6807 Papaver somniferum HOM05D006824 ORTHO05D008779 1.3e-26 123.2 88 65.9
COL.COLO4_19831 Corchorus olitorius HOM05D006824 ORTHO05D008779 6.3e-26 120.9 88 60.2
Carub.0002s2772 Capsella rubella HOM05D006824 ORTHO05D008779 8.2e-26 120.6 88 62.5
Sed0011929 Sechium edule HOM05D006824 ORTHO05D008779 8.2e-26 120.6 88 61.4
CARHR074720 Cardamine hirsuta HOM05D006824 ORTHO05D008779 1.1e-25 120.2 90 61.1
MBI08_g02107_MAGBIO Magnolia biondii HOM05D006824 ORTHO05D008779 1.8e-25 119.4 93 60.2
Aqoxy5G00154 Aquilegia oxysepala HOM05D006824 ORTHO05D008779 3.5e-24 115.2 91 58.2
CDE09G0666 Ceratophyllum demersum HOM05D006824 ORTHO05D008779 2.2e-23 112.5 94 55.3
FAN14G1847 Fragaria x ananassa HOM05D006824 ORTHO05D008779 3.8e-23 111.7 72 66.7
CDE02G0053 Ceratophyllum demersum HOM05D006824 ORTHO05D008779 1.0e-20 103.6 89 55.1
Nitab4.5_0009285g0020 Nicotiana tabacum HOM05D006824 ORTHO05D008779 1.8e-20 102.8 52 82.7
Ah.06g195550 Amaranthus hybridus HOM05D006824 ORTHO05D008779 3.0e-20 102.1 91 57.1
SalBow3G1143 Salvia bowleyana HOM05D006824 ORTHO05D008779 4.0e-20 101.7 61 67.2
Mapoly0002s0020 Marchantia polymorpha HOM05D006824 ORTHO05D008779 8.8e-20 100.5 92 51.1
MD04G1242000 Malus domestica HOM05D006824 ORTHO05D008779 1.2e-19 100.1 71 64.8
Cpa.g.sc123.9 Carica papaya HOM05D006824 ORTHO05D008779 7.5e-19 97.4 52 76.9
Pp3c3_9990 Physcomitrium patens HOM05D006824 ORTHO05D008779 7.5e-19 97.4 84 51.2
AagrBONN_evm.TU.Sc2ySwM_344.3559 Anthoceros agrestis HOM05D006824 ORTHO05D008779 8.3e-18 94.0 85 52.9
Ciclev10012732m.g Citrus clementina HOM05D006824 ORTHO05D008779 1.1e-17 93.6 53 69.8
HPP92_009935 Vanilla planifolia HOM05D006824 ORTHO05D008779 2.4e-17 92.4 66 60.6
MELO3C025302.2 Cucumis melo HOM05D006824 ORTHO05D008779 5.3e-17 91.3 56 67.9
arahy.Tifrunner.gnm1.ann1.EIZA4A Arachis hypogaea HOM05D006824 ORTHO05D008779 7.0e-17 90.9 53 67.9
CBR_g54655 Chara braunii HOM05D006824 ORTHO05D008779 7.0e-17 90.9 88 50.0
MELO3C008753.2 Cucumis melo HOM05D006824 ORTHO05D008779 7.0e-17 90.9 54 68.5
Lj1g0017863 Lotus japonicus HOM05D006824 ORTHO05D008779 7.0e-17 90.9 53 69.8
arahy.Tifrunner.gnm1.ann1.JEI8NT Arachis hypogaea HOM05D006824 ORTHO05D008779 1.0e-15 87.0 52 65.4
Nn1g09799 Nelumbo nucifera HOM05D006824 ORTHO05D008779 1.7e-15 86.3 53 69.8
SMO361G0474 Selaginella moellendorffii HOM05D006824 ORTHO05D008779 3.8e-15 85.1 83 49.4
ATR0263G001 Amborella trichopoda HOM05D006824 ORTHO05D008779 7.2e-14 80.9 82 45.1
Hund07329 Selenicereus undatus HOM05D006824 ORTHO05D008779 1.6e-13 79.7 66 50.0
PRCOL_00006210 Prasinoderma coloniale HOM05D006824 ORTHO05D008779 5.2e-12 74.7 72 50.0
FAN09G1422 Fragaria x ananassa HOM05D001170 ORTHO05D002759 2.6e-11 72.4 54 55.6
Nitab4.5_0008294g0020 Nicotiana tabacum HOM05D006824 ORTHO05D008779 2.2e-10 69.3 45 73.3
SEGI_33071 Sequoiadendron giganteum HOM05D006824 ORTHO05D008779 2.2e-10 69.3 65 50.8
Cre13.g563200 Chlamydomonas reinhardtii HOM05D006824 ORTHO05D008779 6.3e-10 67.8 88 39.8
arahy.Tifrunner.gnm1.ann1.LK4K8I Arachis hypogaea HOM05D006688 ORTHO05D008550 8.6e-07 57.4 34 64.7


User provided reference genes

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