Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g051450.2 Solanum lycopersicum HOM05D019315 ORTHO05D002375 1.0e-95 353.6 203 100.0
Sopen05g029860 Solanum pennellii HOM05D000436 ORTHO05D001944 1.2e-61 240.4 145 97.9
Peaxi162Scf00044g01721 Petunia axillaris HOM05D019315 ORTHO05D002375 8.7e-47 191.0 189 69.3
Nitab4.5_0002996g0010 Nicotiana tabacum HOM05D019315 ORTHO05D002375 1.4e-44 183.7 203 60.1
Nitab4.5_0000128g0190 Nicotiana tabacum HOM05D019315 ORTHO05D002375 4.8e-29 132.1 211 50.7
Migut.L00163 Erythranthe guttata HOM05D004728 ORTHO05D002375 2.9e-18 96.3 142 43.0
RcHm_v2.0_Chr2g0112261 Rosa chinensis HOM05D004728 ORTHO05D002375 7.9e-16 88.2 121 53.7
MSTRG.3754 Avicennia marina HOM05D004728 ORTHO05D002375 2.3e-15 86.7 168 43.5
Dinv13237 Davidia involucrata HOM05D004728 ORTHO05D002375 3.3e-14 82.8 219 37.9
SalBow3G1954 Salvia bowleyana HOM05D004728 ORTHO05D002375 2.2e-13 80.1 166 44.0
FvH4_1g20190 Fragaria vesca HOM05D004728 ORTHO05D002375 3.1e-12 76.3 149 44.3
FAN19G1373 Fragaria x ananassa HOM05D004728 ORTHO05D002375 3.1e-12 76.3 149 44.3
Oeu002157.4 Olea europaea HOM05D004728 ORTHO05D002375 4.1e-12 75.9 131 48.1
FAN28G1290 Fragaria x ananassa HOM05D004728 ORTHO05D002375 5.3e-12 75.5 105 53.3
SGA_v2.0_scaffold115G32157 Striga asiatica HOM05D004728 ORTHO05D002375 6.9e-12 75.1 122 53.3
TAR376G0441 Trochodendron aralioides HOM05D004728 ORTHO05D002375 3.4e-11 72.8 102 52.9
CAN.G151.4 Capsicum annuum HOM05D019315 ORTHO05D002375 4.5e-11 72.4 39 89.7
Duzib147G1195 Durio zibethinus HOM05D004728 ORTHO05D002375 7.7e-11 71.6 126 49.2
TAR376G0070 Trochodendron aralioides HOM05D015253 ORTHO05D002375 1.3e-10 70.9 131 32.8
Cc07_g14530 Coffea canephora HOM05D004728 ORTHO05D002375 1.7e-10 70.5 158 41.8
PGSC0003DMG400034902 Solanum tuberosum HOM05D019315 ORTHO05D002375 1.7e-10 70.5 36 94.4
Aqoxy476s001 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 2.2e-10 70.1 117 53.8
Aqoxy6G00704 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 2.2e-10 70.1 117 53.8
Migut.H02321 Erythranthe guttata HOM05D004728 ORTHO05D002375 2.2e-10 70.1 101 59.4
Oeu049688.1 Olea europaea HOM05D004728 ORTHO05D002375 6.5e-10 68.6 148 47.3
ECA247G1585 Erigeron canadensis HOM05D004728 ORTHO05D002375 9.4e-09 64.7 120 34.2
HanXRQChr17g0556321 Helianthus annuus HOM05D004728 ORTHO05D002375 9.4e-09 64.7 178 28.1
Oeu045990.1 Olea europaea HOM05D004728 ORTHO05D002375 2.1e-08 63.5 178 36.5
ECA247G3235 Erigeron canadensis HOM05D004728 ORTHO05D002375 2.7e-08 63.2 112 41.1
Lj2A538G23 Lonicera japonica HOM05D004728 ORTHO05D002375 2.7e-08 63.2 126 31.7
FAN26G2532 Fragaria x ananassa HOM05D004728 ORTHO05D002375 3.6e-08 62.8 139 41.0
GSVIVG01003435001 Vitis vinifera HOM05D004728 ORTHO05D002375 3.6e-08 62.8 152 29.6
Nn1g05467 Nelumbo nucifera HOM05D004728 ORTHO05D002375 6.1e-08 62.0 103 46.6
GSVIVG01009093001 Vitis vinifera HOM05D004728 ORTHO05D002375 6.1e-08 62.0 120 42.5
Dinv07081 Davidia involucrata HOM05D004728 ORTHO05D002375 7.9e-08 61.6 130 44.6
Lsat_1_v5_gn_9_73441 Lactuca sativa HOM05D004728 ORTHO05D002375 1.0e-07 61.2 105 33.3
SGA_v2.0_scaffold14G07142 Striga asiatica HOM05D007310 ORTHO05D002375 1.0e-07 61.2 99 35.4
Oeu022081.1 Olea europaea HOM05D007310 ORTHO05D002375 1.4e-07 60.8 115 40.9
Aqoxy476s002 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 1.8e-07 60.5 107 29.9
Aqoxy6G00703 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 1.8e-07 60.5 107 29.9
Gohir.A05G223100 Gossypium hirsutum HOM05D004728 ORTHO05D002375 2.3e-07 60.1 160 37.5
Nitab4.5_0006625g0010 Nicotiana tabacum HOM05D007310 ORTHO05D002375 3.0e-07 59.7 117 32.5
HanXRQChr17g0561041 Helianthus annuus HOM05D004728 ORTHO05D002375 3.9e-07 59.3 122 29.5
Lj4A95G12 Lonicera japonica HOM05D004728 ORTHO05D002375 3.9e-07 59.3 97 51.5
Peaxi162Scf00299g00914 Petunia axillaris HOM05D007310 ORTHO05D002375 6.7e-07 58.5 122 30.3
SalBow8G1210 Salvia bowleyana HOM05D007310 ORTHO05D002375 6.7e-07 58.5 98 32.7
CSS0049063 Camellia sinensis var. sinensis HOM05D004728 ORTHO05D002375 8.8e-07 58.2 166 36.7
FAN23G2235 Fragaria x ananassa HOM05D004728 ORTHO05D002375 8.8e-07 58.2 129 38.0
Atru.chr13.1111 Acer truncatum HOM05D004728 ORTHO05D002375 1.1e-06 57.8 165 38.8
MD15G1317800 Malus domestica HOM05D004728 ORTHO05D002375 1.1e-06 57.8 89 53.9
Eucgr.I02631 Eucalyptus grandis HOM05D007310 ORTHO05D002375 1.5e-06 57.4 106 41.5
FAN26G1362 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.5e-06 57.4 129 37.2
RcHm_v2.0_Chr2g0112251 Rosa chinensis HOM05D004728 ORTHO05D002375 1.5e-06 57.4 110 40.0
HanXRQChr05g0149651 Helianthus annuus HOM05D004728 ORTHO05D002375 2.0e-06 57.0 97 47.4
PSO675G1823 Papaver somniferum HOM05D015253 ORTHO05D023059 2.0e-06 57.0 86 37.2
Rhsim05G0103200 Rhododendron simsii HOM05D007310 ORTHO05D002375 2.0e-06 57.0 106 43.4
Duzib093G2113 Durio zibethinus HOM05D004728 ORTHO05D002375 2.6e-06 56.6 105 46.7
PSO541G3905 Papaver somniferum HOM05D015253 ORTHO05D023059 2.6e-06 56.6 86 36.0
Sabra02G0079700 Salix brachista HOM05D004728 ORTHO05D002375 2.6e-06 56.6 139 40.3
Sc01g0000880 Simmondsia chinensis HOM05D004728 ORTHO05D002375 2.6e-06 56.6 114 46.5
FAN19G1066 Fragaria x ananassa HOM05D004728 ORTHO05D002375 3.3e-06 56.2 105 40.0
PGSC0003DMG400012536 Solanum tuberosum HOM05D007310 ORTHO05D002375 3.3e-06 56.2 117 29.9
DCAR_012878 Daucus carota HOM05D004728 ORTHO05D002375 4.4e-06 55.8 130 38.5
PSO675G0090 Papaver somniferum HOM05D015253 ORTHO05D023059 4.4e-06 55.8 86 34.9
DCAR_021882 Daucus carota HOM05D007310 ORTHO05D002375 5.7e-06 55.5 106 43.4
MD08G1189800 Malus domestica HOM05D004728 ORTHO05D002375 5.7e-06 55.5 114 42.1
Gorai.009G233200 Gossypium raimondii HOM05D004728 ORTHO05D002375 7.4e-06 55.1 146 39.7
Lsat_1_v5_gn_1_2940 Lactuca sativa HOM05D004728 ORTHO05D002375 7.4e-06 55.1 107 40.2
PSO761G0559 Papaver somniferum HOM05D015253 ORTHO05D002375 7.4e-06 55.1 165 26.7
MSTRG.1387 Avicennia marina HOM05D004728 ORTHO05D002375 9.7e-06 54.7 116 43.1
Gorai.005G094700 Gossypium raimondii HOM05D004728 ORTHO05D002375 9.7e-06 54.7 131 39.7
MD15G1317700 Malus domestica HOM05D004728 ORTHO05D002375 9.7e-06 54.7 160 37.5


User provided reference genes

Program Settings